RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
COMMD6-211ENST00000486516 ZNF316A6NFI3 1004 aaPredicted RBP10.44□□□□□ -0.74
COMMD6-211ENST00000486516 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
COMMD6-211ENST00000486516 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
COMMD6-211ENST00000486516 POTEEQ6S8J3 1075 aa10.39□□□□□ -0.75
COMMD6-211ENST00000486516 PHF8Q9UPP1 1060 aa10.39□□□□□ -0.75
COMMD6-211ENST00000486516 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
COMMD6-211ENST00000486516 SOX12O15370 315 aa10.33□□□□□ -0.76
COMMD6-211ENST00000486516 NUDT7P0C024 238 aa10.32□□□□□ -0.76
COMMD6-211ENST00000486516 HCSTQ9UBK5 93 aa10.3□□□□□ -0.76
COMMD6-211ENST00000486516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
COMMD6-211ENST00000486516 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
COMMD6-211ENST00000486516 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
COMMD6-211ENST00000486516 PBX2P40425 430 aa10.28□□□□□ -0.76
COMMD6-211ENST00000486516 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
COMMD6-211ENST00000486516 RIOK3O14730 519 aaKnown RBP10.23□□□□□ -0.77
COMMD6-211ENST00000486516 ADGRD1Q6QNK2 874 aa10.23□□□□□ -0.77
COMMD6-211ENST00000486516 C2orf72A6NCS6 295 aa10.22□□□□□ -0.77
COMMD6-211ENST00000486516 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
COMMD6-211ENST00000486516 KIF3CO14782 793 aa10.21□□□□□ -0.77
COMMD6-211ENST00000486516 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.77
COMMD6-211ENST00000486516 FBXO22Q8NEZ5 403 aa10.2□□□□□ -0.78
COMMD6-211ENST00000486516 NLRP6P59044 892 aa10.17□□□□□ -0.78
COMMD6-211ENST00000486516 VGFO15240 615 aaPredicted RBP10.16□□□□□ -0.78
COMMD6-211ENST00000486516 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
COMMD6-211ENST00000486516 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
COMMD6-211ENST00000486516 HRO43593 1189 aa10.14□□□□□ -0.79
COMMD6-211ENST00000486516 KCTD12Q96CX2 325 aaKnown RBP10.14□□□□□ -0.79
COMMD6-211ENST00000486516 PSEN2P49810 448 aa10.13□□□□□ -0.79
COMMD6-211ENST00000486516 SLC34A2O95436 690 aa10.12□□□□□ -0.79
COMMD6-211ENST00000486516 MFRPQ9BY79 579 aa10.12□□□□□ -0.79
COMMD6-211ENST00000486516 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
COMMD6-211ENST00000486516 TK2O00142 265 aa10.07□□□□□ -0.8
COMMD6-211ENST00000486516 KDM4FA0A1W2PPD8 638 aa10.06□□□□□ -0.8
COMMD6-211ENST00000486516 STK24Q9Y6E0 443 aa10.05□□□□□ -0.8
COMMD6-211ENST00000486516 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
COMMD6-211ENST00000486516 PTPN5P54829 565 aa10.03□□□□□ -0.8
COMMD6-211ENST00000486516 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
COMMD6-211ENST00000486516 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
COMMD6-211ENST00000486516 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
COMMD6-211ENST00000486516 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
COMMD6-211ENST00000486516 STK25O00506 426 aa9.95□□□□□ -0.82
COMMD6-211ENST00000486516 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
COMMD6-211ENST00000486516 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
COMMD6-211ENST00000486516 A0A0G2JS52 829 aa9.94□□□□□ -0.82
COMMD6-211ENST00000486516 PPP1R37O75864 691 aa9.94□□□□□ -0.82
COMMD6-211ENST00000486516 RGS20O76081 388 aa9.94□□□□□ -0.82
COMMD6-211ENST00000486516 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
COMMD6-211ENST00000486516 IFFO2Q5TF58 517 aa9.92□□□□□ -0.82
COMMD6-211ENST00000486516 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
COMMD6-211ENST00000486516 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
COMMD6-211ENST00000486516 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
COMMD6-211ENST00000486516 FOXK1P85037 733 aa9.83□□□□□ -0.84
COMMD6-211ENST00000486516 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
COMMD6-211ENST00000486516 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
COMMD6-211ENST00000486516 DSG2Q14126 1118 aa9.82□□□□□ -0.84
COMMD6-211ENST00000486516 Q6ZNB5 142 aa9.82□□□□□ -0.84
COMMD6-211ENST00000486516 WNT2BQ93097 391 aa9.82□□□□□ -0.84
COMMD6-211ENST00000486516 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
COMMD6-211ENST00000486516 GOLGA8CPA6NN73 597 aa9.78□□□□□ -0.84
COMMD6-211ENST00000486516 TBC1D12O60347 775 aa9.78□□□□□ -0.84
COMMD6-211ENST00000486516 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
COMMD6-211ENST00000486516 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
COMMD6-211ENST00000486516 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
COMMD6-211ENST00000486516 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
COMMD6-211ENST00000486516 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
COMMD6-211ENST00000486516 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
COMMD6-211ENST00000486516 LCE2BO14633 110 aa9.74□□□□□ -0.85
COMMD6-211ENST00000486516 RGL2O15211 777 aa9.74□□□□□ -0.85
COMMD6-211ENST00000486516 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
COMMD6-211ENST00000486516 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
COMMD6-211ENST00000486516 PTPREP23469 700 aa9.71□□□□□ -0.86
COMMD6-211ENST00000486516 FOSBP53539 338 aa9.71□□□□□ -0.86
COMMD6-211ENST00000486516 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
COMMD6-211ENST00000486516 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
COMMD6-211ENST00000486516 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
COMMD6-211ENST00000486516 BCAMP50895 628 aa9.65□□□□□ -0.86
COMMD6-211ENST00000486516 PKD2Q13563 968 aa9.61□□□□□ -0.87
COMMD6-211ENST00000486516 PROX2Q3B8N5 592 aa9.61□□□□□ -0.87
COMMD6-211ENST00000486516 ANKK1Q8NFD2 765 aa9.61□□□□□ -0.87
COMMD6-211ENST00000486516 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
COMMD6-211ENST00000486516 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
COMMD6-211ENST00000486516 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
COMMD6-211ENST00000486516 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
COMMD6-211ENST00000486516 GFRA3O60609 400 aa9.57□□□□□ -0.88
COMMD6-211ENST00000486516 WBP1LQ9NX94 342 aa9.57□□□□□ -0.88
COMMD6-211ENST00000486516 EVI5O60447 810 aa9.56□□□□□ -0.88
COMMD6-211ENST00000486516 COL9A1P20849 921 aa9.56□□□□□ -0.88
COMMD6-211ENST00000486516 KCNC4Q03721 635 aa9.56□□□□□ -0.88
COMMD6-211ENST00000486516 PPP1R15BQ5SWA1 713 aa9.56□□□□□ -0.88
COMMD6-211ENST00000486516 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
COMMD6-211ENST00000486516 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
COMMD6-211ENST00000486516 CRISPLD2Q9H0B8 497 aa9.55□□□□□ -0.88
COMMD6-211ENST00000486516 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
COMMD6-211ENST00000486516 LAPTM4AQ15012 233 aa9.53□□□□□ -0.88
COMMD6-211ENST00000486516 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
COMMD6-211ENST00000486516 KIAA1468Q9P260 1216 aa9.49□□□□□ -0.89
COMMD6-211ENST00000486516 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
COMMD6-211ENST00000486516 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
COMMD6-211ENST00000486516 NCKAP5LQ9HCH0 1330 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms