RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
ERGIC3-215ENST00000486268 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
ERGIC3-215ENST00000486268 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
ERGIC3-215ENST00000486268 CDC42BPBQ9Y5S2 1711 aa17.68■□□□□ 0.42
ERGIC3-215ENST00000486268 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
ERGIC3-215ENST00000486268 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
ERGIC3-215ENST00000486268 PLCH2O75038 1416 aa17.64■□□□□ 0.42
ERGIC3-215ENST00000486268 MIA2Q96PC5 1412 aa17.64■□□□□ 0.42
ERGIC3-215ENST00000486268 TEX14Q8IWB6 1497 aa17.64■□□□□ 0.41
ERGIC3-215ENST00000486268 ARAP3Q8WWN8 1544 aa17.64■□□□□ 0.41
ERGIC3-215ENST00000486268 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
ERGIC3-215ENST00000486268 FAM50AQ14320 339 aaKnown RBP17.61■□□□□ 0.41
ERGIC3-215ENST00000486268 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
ERGIC3-215ENST00000486268 FANCAO15360 1455 aa17.6■□□□□ 0.41
ERGIC3-215ENST00000486268 CFAP74Q9C0B2 1584 aa17.6■□□□□ 0.41
ERGIC3-215ENST00000486268 ITSN2Q9NZM3 1697 aa17.59■□□□□ 0.41
ERGIC3-215ENST00000486268 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
ERGIC3-215ENST00000486268 NEO1Q92859 1461 aa17.59■□□□□ 0.41
ERGIC3-215ENST00000486268 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
ERGIC3-215ENST00000486268 KDM6BO15054 1643 aa17.58■□□□□ 0.41
ERGIC3-215ENST00000486268 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
ERGIC3-215ENST00000486268 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
ERGIC3-215ENST00000486268 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
ERGIC3-215ENST00000486268 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
ERGIC3-215ENST00000486268 SETD5Q9C0A6 1442 aa17.54■□□□□ 0.4
ERGIC3-215ENST00000486268 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
ERGIC3-215ENST00000486268 RICTORQ6R327 1708 aa17.52■□□□□ 0.4
ERGIC3-215ENST00000486268 ABCC1P33527 1531 aa17.52■□□□□ 0.4
ERGIC3-215ENST00000486268 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
ERGIC3-215ENST00000486268 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
ERGIC3-215ENST00000486268 ITGAEP38570 1179 aa17.5■□□□□ 0.39
ERGIC3-215ENST00000486268 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
ERGIC3-215ENST00000486268 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
ERGIC3-215ENST00000486268 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
ERGIC3-215ENST00000486268 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
ERGIC3-215ENST00000486268 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
ERGIC3-215ENST00000486268 HFM1A2PYH4 1435 aa17.46■□□□□ 0.39
ERGIC3-215ENST00000486268 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
ERGIC3-215ENST00000486268 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
ERGIC3-215ENST00000486268 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
ERGIC3-215ENST00000486268 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
ERGIC3-215ENST00000486268 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
ERGIC3-215ENST00000486268 KDM5CP41229 1560 aa17.43■□□□□ 0.38
ERGIC3-215ENST00000486268 PLEKHH2Q8IVE3 1493 aa17.43■□□□□ 0.38
ERGIC3-215ENST00000486268 MBD5Q9P267 1494 aa17.43■□□□□ 0.38
ERGIC3-215ENST00000486268 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
ERGIC3-215ENST00000486268 PTPRKQ15262 1439 aa17.41■□□□□ 0.38
ERGIC3-215ENST00000486268 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
ERGIC3-215ENST00000486268 DNMT1P26358 1616 aaKnown RBP17.4■□□□□ 0.38
ERGIC3-215ENST00000486268 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
ERGIC3-215ENST00000486268 HNRNPMP52272 730 aaKnown RBP eCLIP17.4■□□□□ 0.38
ERGIC3-215ENST00000486268 ROCK1Q13464 1354 aa17.4■□□□□ 0.38
ERGIC3-215ENST00000486268 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
ERGIC3-215ENST00000486268 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
ERGIC3-215ENST00000486268 DAPK1P53355 1430 aa17.38■□□□□ 0.37
ERGIC3-215ENST00000486268 NAIPQ13075 1403 aa17.37■□□□□ 0.37
ERGIC3-215ENST00000486268 HECW2Q9P2P5 1572 aa17.36■□□□□ 0.37
ERGIC3-215ENST00000486268 KIDINS220Q9ULH0 1771 aa17.36■□□□□ 0.37
ERGIC3-215ENST00000486268 ABCC5O15440 1437 aa17.35■□□□□ 0.37
ERGIC3-215ENST00000486268 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
ERGIC3-215ENST00000486268 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
ERGIC3-215ENST00000486268 INO80Q9ULG1 1556 aaPredicted RBP17.35■□□□□ 0.37
ERGIC3-215ENST00000486268 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
ERGIC3-215ENST00000486268 CROCC2H7BZ55 1655 aa17.34■□□□□ 0.37
ERGIC3-215ENST00000486268 YEATS2Q9ULM3 1422 aa17.34■□□□□ 0.37
ERGIC3-215ENST00000486268 ABCA6Q8N139 1617 aa17.33■□□□□ 0.37
ERGIC3-215ENST00000486268 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.37
ERGIC3-215ENST00000486268 MAGI2Q86UL8 1455 aa17.33■□□□□ 0.37
ERGIC3-215ENST00000486268 MLH3Q9UHC1 1453 aa17.33■□□□□ 0.37
ERGIC3-215ENST00000486268 ILDR1Q86SU0 546 aaPredicted RBP17.33■□□□□ 0.36
ERGIC3-215ENST00000486268 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
ERGIC3-215ENST00000486268 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
ERGIC3-215ENST00000486268 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
ERGIC3-215ENST00000486268 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
ERGIC3-215ENST00000486268 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
ERGIC3-215ENST00000486268 MAST1Q9Y2H9 1570 aa17.3■□□□□ 0.36
ERGIC3-215ENST00000486268 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
ERGIC3-215ENST00000486268 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
ERGIC3-215ENST00000486268 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.36
ERGIC3-215ENST00000486268 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
ERGIC3-215ENST00000486268 C9orf84Q5VXU9 1444 aa17.25■□□□□ 0.35
ERGIC3-215ENST00000486268 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
ERGIC3-215ENST00000486268 ATP10AO60312 1499 aa17.24■□□□□ 0.35
ERGIC3-215ENST00000486268 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
ERGIC3-215ENST00000486268 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
ERGIC3-215ENST00000486268 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
ERGIC3-215ENST00000486268 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
ERGIC3-215ENST00000486268 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
ERGIC3-215ENST00000486268 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
ERGIC3-215ENST00000486268 TSPY4P0CV99 314 aa17.21■□□□□ 0.35
ERGIC3-215ENST00000486268 TSPY10P0CW01 314 aa17.21■□□□□ 0.35
ERGIC3-215ENST00000486268 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
ERGIC3-215ENST00000486268 A2MP01023 1474 aa17.18■□□□□ 0.34
ERGIC3-215ENST00000486268 AGLP35573 1532 aa17.16■□□□□ 0.34
ERGIC3-215ENST00000486268 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms