RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 C11orf95C9JLR9 678 aaPredicted RBP31.13■■■□□ 2.57
CLN5-202ENST00000485938 ANKRD30BQ9BXX2 1392 aa31.13■■■□□ 2.57
CLN5-202ENST00000485938 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
CLN5-202ENST00000485938 RPRD2Q5VT52 1461 aaKnown RBP31.12■■■□□ 2.57
CLN5-202ENST00000485938 DAPK1P53355 1430 aa31.12■■■□□ 2.57
CLN5-202ENST00000485938 CCDC184Q52MB2 194 aa31.12■■■□□ 2.57
CLN5-202ENST00000485938 TEX14Q8IWB6 1497 aa31.09■■■□□ 2.57
CLN5-202ENST00000485938 IRX6P78412 446 aaPredicted RBP31.09■■■□□ 2.57
CLN5-202ENST00000485938 PRKRIP1Q9H875 184 aaPredicted RBP31.09■■■□□ 2.57
CLN5-202ENST00000485938 DNMT1P26358 1616 aaKnown RBP31.08■■■□□ 2.57
CLN5-202ENST00000485938 ARID3CA6NKF2 412 aa31.07■■■□□ 2.56
CLN5-202ENST00000485938 ERICH6BQ5W0A0 696 aa31.06■■■□□ 2.56
CLN5-202ENST00000485938 ABCC5O15440 1437 aa31.06■■■□□ 2.56
CLN5-202ENST00000485938 NBPF8Q3BBV2 869 aa31.06■■■□□ 2.56
CLN5-202ENST00000485938 IFT140Q96RY7 1462 aa31.05■■■□□ 2.56
CLN5-202ENST00000485938 SPATA31E1Q6ZUB1 1445 aa31.02■■■□□ 2.56
CLN5-202ENST00000485938 POLR1AO95602 1720 aaPredicted RBP31.01■■■□□ 2.55
CLN5-202ENST00000485938 CDK11AQ9UQ88 783 aaPredicted RBP30.99■■■□□ 2.55
CLN5-202ENST00000485938 MRS2Q9HD23 443 aa30.96■■■□□ 2.55
CLN5-202ENST00000485938 KIAA0556O60303 1618 aa30.96■■■□□ 2.55
CLN5-202ENST00000485938 KIF7Q2M1P5 1343 aa30.95■■■□□ 2.55
CLN5-202ENST00000485938 ZNF644Q9H582 1327 aaPredicted RBP30.95■■■□□ 2.55
CLN5-202ENST00000485938 NUP153P49790 1475 aaKnown RBP30.95■■■□□ 2.55
CLN5-202ENST00000485938 MSH5O43196 834 aa30.95■■■□□ 2.55
CLN5-202ENST00000485938 ZBED9Q6R2W3 1325 aa30.95■■■□□ 2.55
CLN5-202ENST00000485938 DISP1Q96F81 1524 aa30.95■■■□□ 2.54
CLN5-202ENST00000485938 FAM9BQ8IZU0 186 aa30.95■■■□□ 2.54
CLN5-202ENST00000485938 PPP4R2Q9NY27 417 aa30.94■■■□□ 2.54
CLN5-202ENST00000485938 FANCIQ9NVI1 1328 aa30.94■■■□□ 2.54
CLN5-202ENST00000485938 SLC4A1APQ9BWU0 796 aaKnown RBP30.93■■■□□ 2.54
CLN5-202ENST00000485938 KIAA0586Q9BVV6 1533 aa30.91■■■□□ 2.54
CLN5-202ENST00000485938 EIF4G3O43432 1585 aaKnown RBP30.9■■■□□ 2.54
CLN5-202ENST00000485938 RAPGEF6Q8TEU7 1601 aa30.89■■■□□ 2.54
CLN5-202ENST00000485938 PZPP20742 1482 aa30.88■■■□□ 2.53
CLN5-202ENST00000485938 MBD5Q9P267 1494 aa30.83■■■□□ 2.53
CLN5-202ENST00000485938 CAMSAP2Q08AD1 1489 aa30.8■■■□□ 2.52
CLN5-202ENST00000485938 ADGBQ8N7X0 1667 aa30.79■■■□□ 2.52
CLN5-202ENST00000485938 TROQ12816 1431 aaPredicted RBP30.77■■■□□ 2.52
CLN5-202ENST00000485938 DHX29Q7Z478 1369 aaKnown RBP30.76■■■□□ 2.52
CLN5-202ENST00000485938 PRG4Q92954 1404 aaPredicted RBP30.75■■■□□ 2.51
CLN5-202ENST00000485938 ITSN2Q9NZM3 1697 aa30.75■■■□□ 2.51
CLN5-202ENST00000485938 KIAA1107Q9UPP5 1409 aa30.74■■■□□ 2.51
CLN5-202ENST00000485938 ADGRL2O95490 1459 aa30.73■■■□□ 2.51
CLN5-202ENST00000485938 GRIN2AQ12879 1464 aa30.73■■■□□ 2.51
CLN5-202ENST00000485938 BCORL1Q5H9F3 1711 aa30.72■■■□□ 2.51
CLN5-202ENST00000485938 CFDP1Q9UEE9 299 aaPredicted RBP30.72■■■□□ 2.51
CLN5-202ENST00000485938 GPATCH8Q9UKJ3 1502 aaKnown RBP30.71■■■□□ 2.51
CLN5-202ENST00000485938 CROCC2H7BZ55 1655 aa30.71■■■□□ 2.51
CLN5-202ENST00000485938 B4GALNT3Q6L9W6 998 aa30.7■■■□□ 2.51
CLN5-202ENST00000485938 USP47Q96K76 1375 aa30.7■■■□□ 2.51
CLN5-202ENST00000485938 KIF14Q15058 1648 aa30.7■■■□□ 2.5
CLN5-202ENST00000485938 ADCY10Q96PN6 1610 aa30.68■■■□□ 2.5
CLN5-202ENST00000485938 SMG6Q86US8 1419 aaKnown RBP30.68■■■□□ 2.5
CLN5-202ENST00000485938 FBLN2P98095 1184 aa30.67■■■□□ 2.5
CLN5-202ENST00000485938 KDM5CP41229 1560 aa30.66■■■□□ 2.5
CLN5-202ENST00000485938 ARID4BQ4LE39 1312 aaPredicted RBP30.63■■■□□ 2.49
CLN5-202ENST00000485938 PKD2Q13563 968 aa30.63■■■□□ 2.49
CLN5-202ENST00000485938 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
CLN5-202ENST00000485938 PLB1Q6P1J6 1458 aa30.62■■■□□ 2.49
CLN5-202ENST00000485938 ANKRD30AQ9BXX3 1397 aa30.61■■■□□ 2.49
CLN5-202ENST00000485938 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
CLN5-202ENST00000485938 BCL11AQ9H165 835 aa30.59■■■□□ 2.49
CLN5-202ENST00000485938 ZNF326Q5BKZ1 582 aaKnown RBP30.59■■■□□ 2.49
CLN5-202ENST00000485938 UHRF1BP1Q6BDS2 1440 aa30.58■■■□□ 2.49
CLN5-202ENST00000485938 ERICH6Q7L0X2 663 aa30.58■■■□□ 2.49
CLN5-202ENST00000485938 ZNF777Q9ULD5 760 aaPredicted RBP30.58■■■□□ 2.49
CLN5-202ENST00000485938 ANKRD50Q9ULJ7 1429 aa30.56■■■□□ 2.48
CLN5-202ENST00000485938 NUDCQ9Y266 331 aa30.56■■■□□ 2.48
CLN5-202ENST00000485938 RNF123Q5XPI4 1314 aa30.56■■■□□ 2.48
CLN5-202ENST00000485938 RALGAPBQ86X10 1494 aa30.56■■■□□ 2.48
CLN5-202ENST00000485938 SYNJ2O15056 1496 aa30.55■■■□□ 2.48
CLN5-202ENST00000485938 POLR3GLQ9BT43 218 aa30.54■■■□□ 2.48
CLN5-202ENST00000485938 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
CLN5-202ENST00000485938 ROCK2O75116 1388 aaKnown RBP30.53■■■□□ 2.48
CLN5-202ENST00000485938 CNGB1Q14028 1251 aaPredicted RBP30.51■■■□□ 2.47
CLN5-202ENST00000485938 ARHGEF12Q9NZN5 1544 aa30.5■■■□□ 2.47
CLN5-202ENST00000485938 PNISRQ8TF01 805 aaKnown RBP30.48■■■□□ 2.47
CLN5-202ENST00000485938 SHANK2Q9UPX8 1470 aa30.48■■■□□ 2.47
CLN5-202ENST00000485938 CDC42BPAQ5VT25 1732 aa30.47■■■□□ 2.47
CLN5-202ENST00000485938 NUP155O75694 1391 aa30.45■■■□□ 2.47
CLN5-202ENST00000485938 KDM5DQ9BY66 1539 aa30.45■■■□□ 2.46
CLN5-202ENST00000485938 C9orf84Q5VXU9 1444 aa30.44■■■□□ 2.46
CLN5-202ENST00000485938 CARMIL2Q6F5E8 1435 aa30.43■■■□□ 2.46
CLN5-202ENST00000485938 CARD11Q9BXL7 1154 aa30.42■■■□□ 2.46
CLN5-202ENST00000485938 ABCC10Q5T3U5 1492 aa30.42■■■□□ 2.46
CLN5-202ENST00000485938 KIF15Q9NS87 1388 aa30.41■■■□□ 2.46
CLN5-202ENST00000485938 TMC1Q8TDI8 760 aa30.4■■■□□ 2.46
CLN5-202ENST00000485938 LRPPRCP42704 1394 aaKnown RBP30.38■■■□□ 2.45
CLN5-202ENST00000485938 CCDC136Q96JN2 1154 aa30.36■■■□□ 2.45
CLN5-202ENST00000485938 ABCA8O94911 1581 aa30.36■■■□□ 2.45
CLN5-202ENST00000485938 PLEKHD1A6NEE1 506 aa30.35■■■□□ 2.45
CLN5-202ENST00000485938 PTPRGP23470 1445 aa30.35■■■□□ 2.45
CLN5-202ENST00000485938 NUP160Q12769 1436 aa30.35■■■□□ 2.45
CLN5-202ENST00000485938 JPH4Q96JJ6 628 aa30.35■■■□□ 2.45
CLN5-202ENST00000485938 KTN1Q86UP2 1357 aaKnown RBP30.34■■■□□ 2.45
CLN5-202ENST00000485938 BRD4O60885 1362 aaPredicted RBP30.34■■■□□ 2.45
CLN5-202ENST00000485938 ST20-MTHFSA0A0A6YYL1 179 aa30.34■■■□□ 2.45
CLN5-202ENST00000485938 E9PCH4 1651 aa30.33■■■□□ 2.45
CLN5-202ENST00000485938 ATP10BO94823 1461 aa30.32■■■□□ 2.44
CLN5-202ENST00000485938 MYBBP1AQ9BQG0 1328 aaKnown RBP30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms