RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 VARS2Q5ST30 1063 aaKnown RBP8.71□□□□□ -1.02
PRPF38B-205ENST00000485810 BCL11BQ9C0K0 894 aaPredicted RBP8.7□□□□□ -1.02
PRPF38B-205ENST00000485810 MFRPQ9BY79 579 aa8.69□□□□□ -1.02
PRPF38B-205ENST00000485810 ZSWIM6Q9HCJ5 1215 aa8.69□□□□□ -1.02
PRPF38B-205ENST00000485810 NLRP6P59044 892 aa8.67□□□□□ -1.02
PRPF38B-205ENST00000485810 KHSRPQ92945 711 aaKnown RBP eCLIP8.67□□□□□ -1.023e-7■■□□□ 13.1
PRPF38B-205ENST00000485810 RIMBP2O15034 1052 aa8.66□□□□□ -1.02
PRPF38B-205ENST00000485810 ARSIQ5FYB1 569 aa8.66□□□□□ -1.02
PRPF38B-205ENST00000485810 ZNF687Q8N1G0 1237 aa8.66□□□□□ -1.02
PRPF38B-205ENST00000485810 KIF3CO14782 793 aa8.65□□□□□ -1.02
PRPF38B-205ENST00000485810 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
PRPF38B-205ENST00000485810 PKD2Q13563 968 aa8.62□□□□□ -1.03
PRPF38B-205ENST00000485810 C2orf72A6NCS6 295 aa8.61□□□□□ -1.03
PRPF38B-205ENST00000485810 RGL2O15211 777 aa8.61□□□□□ -1.03
PRPF38B-205ENST00000485810 STK25O00506 426 aa8.6□□□□□ -1.03
PRPF38B-205ENST00000485810 ECM2O94769 699 aaPredicted RBP8.6□□□□□ -1.03
PRPF38B-205ENST00000485810 ZNF316A6NFI3 1004 aaPredicted RBP8.59□□□□□ -1.03
PRPF38B-205ENST00000485810 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
PRPF38B-205ENST00000485810 PPP1R37O75864 691 aa8.56□□□□□ -1.04
PRPF38B-205ENST00000485810 TAOK2Q9UL54 1235 aa8.56□□□□□ -1.04
PRPF38B-205ENST00000485810 MYT1LQ9UL68 1186 aa8.56□□□□□ -1.04
PRPF38B-205ENST00000485810 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
PRPF38B-205ENST00000485810 NUDT7P0C024 238 aa8.53□□□□□ -1.04
PRPF38B-205ENST00000485810 SLC34A2O95436 690 aa8.51□□□□□ -1.05
PRPF38B-205ENST00000485810 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
PRPF38B-205ENST00000485810 LSM11P83369 360 aaKnown RBP eCLIP8.5□□□□□ -1.05
PRPF38B-205ENST00000485810 ANKRD13DQ6ZTN6 518 aa8.5□□□□□ -1.05
PRPF38B-205ENST00000485810 PCDHGA4Q9Y5G9 962 aa8.5□□□□□ -1.05
PRPF38B-205ENST00000485810 KDM4FA0A1W2PPD8 638 aa8.48□□□□□ -1.05
PRPF38B-205ENST00000485810 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
PRPF38B-205ENST00000485810 PTGER2P43116 358 aa8.45□□□□□ -1.06
PRPF38B-205ENST00000485810 TMC2Q8TDI7 906 aa8.45□□□□□ -1.06
PRPF38B-205ENST00000485810 PBX2P40425 430 aa8.43□□□□□ -1.06
PRPF38B-205ENST00000485810 PTCD2Q8WV60 388 aaKnown RBP8.41□□□□□ -1.06
PRPF38B-205ENST00000485810 FOXK1P85037 733 aa8.38□□□□□ -1.07
PRPF38B-205ENST00000485810 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
PRPF38B-205ENST00000485810 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
PRPF38B-205ENST00000485810 DSG2Q14126 1118 aa8.37□□□□□ -1.07
PRPF38B-205ENST00000485810 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-205ENST00000485810 DMRTA1Q5VZB9 504 aa8.36□□□□□ -1.07
PRPF38B-205ENST00000485810 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-205ENST00000485810 ARHGAP33O14559 1287 aa8.35□□□□□ -1.07
PRPF38B-205ENST00000485810 PSEN2P49810 448 aa8.35□□□□□ -1.07
PRPF38B-205ENST00000485810 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
PRPF38B-205ENST00000485810 HRO43593 1189 aa8.34□□□□□ -1.07
PRPF38B-205ENST00000485810 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
PRPF38B-205ENST00000485810 PSDA5PKW4 1024 aaPredicted RBP8.31□□□□□ -1.08
PRPF38B-205ENST00000485810 TK2O00142 265 aa8.3□□□□□ -1.08
PRPF38B-205ENST00000485810 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
PRPF38B-205ENST00000485810 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
PRPF38B-205ENST00000485810 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
PRPF38B-205ENST00000485810 HCSTQ9UBK5 93 aa8.26□□□□□ -1.09
PRPF38B-205ENST00000485810 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
PRPF38B-205ENST00000485810 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
PRPF38B-205ENST00000485810 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
PRPF38B-205ENST00000485810 TBC1D12O60347 775 aa8.23□□□□□ -1.09
PRPF38B-205ENST00000485810 UPF1Q92900 1129 aaKnown RBP eCLIP8.23□□□□□ -1.09
PRPF38B-205ENST00000485810 KCNK17Q96T54 332 aa8.22□□□□□ -1.09
PRPF38B-205ENST00000485810 VPS9D1Q9Y2B5 631 aa8.22□□□□□ -1.09
PRPF38B-205ENST00000485810 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
PRPF38B-205ENST00000485810 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
PRPF38B-205ENST00000485810 FOSBP53539 338 aa8.2□□□□□ -1.1
PRPF38B-205ENST00000485810 ANO8Q9HCE9 1232 aaPredicted RBP8.2□□□□□ -1.1
PRPF38B-205ENST00000485810 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
PRPF38B-205ENST00000485810 ZNF454Q8N9F8 522 aa8.19□□□□□ -1.1
PRPF38B-205ENST00000485810 BCL2L12Q9HB09 334 aa8.19□□□□□ -1.1
PRPF38B-205ENST00000485810 BHMG1C9JSJ3 638 aaPredicted RBP8.18□□□□□ -1.1
PRPF38B-205ENST00000485810 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
PRPF38B-205ENST00000485810 ZBED2Q9BTP6 218 aa8.15□□□□□ -1.1
PRPF38B-205ENST00000485810 PDE4AP27815 886 aa8.14□□□□□ -1.11
PRPF38B-205ENST00000485810 EVI5O60447 810 aa8.13□□□□□ -1.11
PRPF38B-205ENST00000485810 ADAM33Q9BZ11 813 aa8.13□□□□□ -1.11
PRPF38B-205ENST00000485810 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
PRPF38B-205ENST00000485810 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
PRPF38B-205ENST00000485810 PTPN5P54829 565 aa8.11□□□□□ -1.11
PRPF38B-205ENST00000485810 MFSD10Q14728 455 aa8.11□□□□□ -1.11
PRPF38B-205ENST00000485810 JPH4Q96JJ6 628 aa8.11□□□□□ -1.11
PRPF38B-205ENST00000485810 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
PRPF38B-205ENST00000485810 SLC24A1O60721 1099 aa8.1□□□□□ -1.11
PRPF38B-205ENST00000485810 PTPREP23469 700 aa8.1□□□□□ -1.11
PRPF38B-205ENST00000485810 THSD4Q6ZMP0 1018 aa8.1□□□□□ -1.11
PRPF38B-205ENST00000485810 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
PRPF38B-205ENST00000485810 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
PRPF38B-205ENST00000485810 ZDHHC16Q969W1 377 aa8.09□□□□□ -1.12
PRPF38B-205ENST00000485810 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
PRPF38B-205ENST00000485810 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
PRPF38B-205ENST00000485810 DCAF8L2P0C7V8 631 aa8.07□□□□□ -1.12
PRPF38B-205ENST00000485810 PCDHGA10Q9Y5H3 936 aa8.07□□□□□ -1.12
PRPF38B-205ENST00000485810 COL9A1P20849 921 aa8.06□□□□□ -1.12
PRPF38B-205ENST00000485810 IFFO2Q5TF58 517 aa8.06□□□□□ -1.12
PRPF38B-205ENST00000485810 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
PRPF38B-205ENST00000485810 PROX2Q3B8N5 592 aa8.04□□□□□ -1.12
PRPF38B-205ENST00000485810 WNT2BQ93097 391 aa8.04□□□□□ -1.12
PRPF38B-205ENST00000485810 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
PRPF38B-205ENST00000485810 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.13
PRPF38B-205ENST00000485810 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
PRPF38B-205ENST00000485810 A0A0G2JS52 829 aa7.99□□□□□ -1.13
PRPF38B-205ENST00000485810 GOLGA8CPA6NN73 597 aa7.99□□□□□ -1.13
PRPF38B-205ENST00000485810 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
PRPF38B-205ENST00000485810 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms