RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
RPUSD3-217ENST00000485705 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
RPUSD3-217ENST00000485705 NEO1Q92859 1461 aa24.13■■□□□ 1.45
RPUSD3-217ENST00000485705 COL17A1Q9UMD9 1497 aaPredicted RBP24.13■■□□□ 1.45
RPUSD3-217ENST00000485705 EFCAB2Q5VUJ9 269 aa24.12■■□□□ 1.45
RPUSD3-217ENST00000485705 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
RPUSD3-217ENST00000485705 KDM6BO15054 1643 aa24.11■■□□□ 1.45
RPUSD3-217ENST00000485705 CFAP74Q9C0B2 1584 aa24.11■■□□□ 1.45
RPUSD3-217ENST00000485705 ITSN2Q9NZM3 1697 aa24.1■■□□□ 1.45
RPUSD3-217ENST00000485705 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
RPUSD3-217ENST00000485705 PHLDB1Q86UU1 1377 aa24.07■■□□□ 1.44
RPUSD3-217ENST00000485705 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
RPUSD3-217ENST00000485705 SAMD9LQ8IVG5 1584 aa24.04■■□□□ 1.44
RPUSD3-217ENST00000485705 ADGRL1O94910 1474 aa24.04■■□□□ 1.44
RPUSD3-217ENST00000485705 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-217ENST00000485705 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
RPUSD3-217ENST00000485705 SCAPERQ9BY12 1400 aa24.02■■□□□ 1.44
RPUSD3-217ENST00000485705 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
RPUSD3-217ENST00000485705 ABCC1P33527 1531 aa24■■□□□ 1.43
RPUSD3-217ENST00000485705 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
RPUSD3-217ENST00000485705 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
RPUSD3-217ENST00000485705 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
RPUSD3-217ENST00000485705 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
RPUSD3-217ENST00000485705 SYCP2Q9BX26 1530 aa23.96■■□□□ 1.43
RPUSD3-217ENST00000485705 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.43
RPUSD3-217ENST00000485705 CAMSAP2Q08AD1 1489 aa23.95■■□□□ 1.42
RPUSD3-217ENST00000485705 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
RPUSD3-217ENST00000485705 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
RPUSD3-217ENST00000485705 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
RPUSD3-217ENST00000485705 POGZQ7Z3K3 1410 aa23.93■■□□□ 1.42
RPUSD3-217ENST00000485705 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
RPUSD3-217ENST00000485705 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
RPUSD3-217ENST00000485705 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
RPUSD3-217ENST00000485705 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
RPUSD3-217ENST00000485705 MBD5Q9P267 1494 aa23.89■■□□□ 1.42
RPUSD3-217ENST00000485705 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
RPUSD3-217ENST00000485705 TCOF1Q13428 1488 aaKnown RBP23.86■■□□□ 1.41
RPUSD3-217ENST00000485705 KDM5CP41229 1560 aa23.86■■□□□ 1.41
RPUSD3-217ENST00000485705 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
RPUSD3-217ENST00000485705 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-217ENST00000485705 ARHGEF5Q12774 1597 aa23.82■■□□□ 1.4
RPUSD3-217ENST00000485705 YEATS2Q9ULM3 1422 aa23.81■■□□□ 1.4
RPUSD3-217ENST00000485705 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
RPUSD3-217ENST00000485705 HECW2Q9P2P5 1572 aa23.79■■□□□ 1.4
RPUSD3-217ENST00000485705 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
RPUSD3-217ENST00000485705 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
RPUSD3-217ENST00000485705 MLH3Q9UHC1 1453 aa23.78■■□□□ 1.4
RPUSD3-217ENST00000485705 ZFYVE16Q7Z3T8 1539 aa23.78■■□□□ 1.4
RPUSD3-217ENST00000485705 SPAG9O60271 1321 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-217ENST00000485705 MAGI2Q86UL8 1455 aa23.76■■□□□ 1.39
RPUSD3-217ENST00000485705 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
RPUSD3-217ENST00000485705 ABCC5O15440 1437 aa23.76■■□□□ 1.39
RPUSD3-217ENST00000485705 ARHGEF40Q8TER5 1519 aa23.75■■□□□ 1.39
RPUSD3-217ENST00000485705 RRBP1Q9P2E9 1410 aaKnown RBP23.75■■□□□ 1.39
RPUSD3-217ENST00000485705 INO80Q9ULG1 1556 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-217ENST00000485705 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
RPUSD3-217ENST00000485705 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
RPUSD3-217ENST00000485705 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
RPUSD3-217ENST00000485705 DAPK1P53355 1430 aa23.72■■□□□ 1.39
RPUSD3-217ENST00000485705 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
RPUSD3-217ENST00000485705 DIP2CQ9Y2E4 1556 aa23.71■■□□□ 1.39
RPUSD3-217ENST00000485705 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
RPUSD3-217ENST00000485705 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
RPUSD3-217ENST00000485705 ATP10AO60312 1499 aa23.68■■□□□ 1.38
RPUSD3-217ENST00000485705 RTEL1-TNFRSF6BF6WH68 1400 aa23.68■■□□□ 1.38
RPUSD3-217ENST00000485705 C9orf84Q5VXU9 1444 aa23.68■■□□□ 1.38
RPUSD3-217ENST00000485705 MAST1Q9Y2H9 1570 aa23.68■■□□□ 1.38
RPUSD3-217ENST00000485705 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
RPUSD3-217ENST00000485705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
RPUSD3-217ENST00000485705 PTPRKQ15262 1439 aa23.66■■□□□ 1.38
RPUSD3-217ENST00000485705 SHANK2Q9UPX8 1470 aa23.65■■□□□ 1.38
RPUSD3-217ENST00000485705 ITGAEP38570 1179 aa23.65■■□□□ 1.38
RPUSD3-217ENST00000485705 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
RPUSD3-217ENST00000485705 ADGBQ8N7X0 1667 aa23.64■■□□□ 1.37
RPUSD3-217ENST00000485705 A2MP01023 1474 aa23.59■■□□□ 1.37
RPUSD3-217ENST00000485705 REREQ9P2R6 1566 aa23.59■■□□□ 1.37
RPUSD3-217ENST00000485705 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
RPUSD3-217ENST00000485705 PLXNC1O60486 1568 aa23.58■■□□□ 1.37
RPUSD3-217ENST00000485705 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
RPUSD3-217ENST00000485705 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
RPUSD3-217ENST00000485705 ADGRL2O95490 1459 aa23.55■■□□□ 1.36
RPUSD3-217ENST00000485705 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
RPUSD3-217ENST00000485705 ANKRD30AQ9BXX3 1397 aa23.54■■□□□ 1.36
RPUSD3-217ENST00000485705 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
RPUSD3-217ENST00000485705 MLECQ14165 292 aa23.52■■□□□ 1.36
RPUSD3-217ENST00000485705 AGLP35573 1532 aa23.52■■□□□ 1.36
RPUSD3-217ENST00000485705 BCORL1Q5H9F3 1711 aa23.51■■□□□ 1.35
RPUSD3-217ENST00000485705 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
RPUSD3-217ENST00000485705 ROCK1Q13464 1354 aa23.48■■□□□ 1.35
RPUSD3-217ENST00000485705 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
RPUSD3-217ENST00000485705 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.34
RPUSD3-217ENST00000485705 KIF3BO15066 747 aa23.45■■□□□ 1.34
RPUSD3-217ENST00000485705 GGT6Q6P531 493 aa23.42■■□□□ 1.34
RPUSD3-217ENST00000485705 ERBINQ96RT1 1412 aa23.42■■□□□ 1.34
RPUSD3-217ENST00000485705 EIF2AK4Q9P2K8 1649 aaKnown RBP23.41■■□□□ 1.34
RPUSD3-217ENST00000485705 MADDQ8WXG6 1647 aa23.41■■□□□ 1.34
RPUSD3-217ENST00000485705 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
RPUSD3-217ENST00000485705 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.33
RPUSD3-217ENST00000485705 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
RPUSD3-217ENST00000485705 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms