RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.11
CTSA-208ENST00000485627 FGD6Q6ZV73 1430 aa14.32□□□□□ -0.12
CTSA-208ENST00000485627 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
CTSA-208ENST00000485627 GLI2P10070 1586 aa14.31□□□□□ -0.12
CTSA-208ENST00000485627 ITGAEP38570 1179 aa14.31□□□□□ -0.12
CTSA-208ENST00000485627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.3□□□□□ -0.12
CTSA-208ENST00000485627 MIA2Q96PC5 1412 aa14.27□□□□□ -0.12
CTSA-208ENST00000485627 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
CTSA-208ENST00000485627 KIF14Q15058 1648 aa14.25□□□□□ -0.13
CTSA-208ENST00000485627 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
CTSA-208ENST00000485627 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
CTSA-208ENST00000485627 HRCP23327 699 aa14.23□□□□□ -0.13
CTSA-208ENST00000485627 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
CTSA-208ENST00000485627 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
CTSA-208ENST00000485627 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
CTSA-208ENST00000485627 ZCCHC11Q5TAX3 1644 aaKnown RBP14.21□□□□□ -0.13
CTSA-208ENST00000485627 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
CTSA-208ENST00000485627 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
CTSA-208ENST00000485627 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
CTSA-208ENST00000485627 TEX14Q8IWB6 1497 aa14.19□□□□□ -0.14
CTSA-208ENST00000485627 ITSN2Q9NZM3 1697 aa14.19□□□□□ -0.14
CTSA-208ENST00000485627 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
CTSA-208ENST00000485627 ZNF777Q9ULD5 760 aaPredicted RBP14.18□□□□□ -0.14
CTSA-208ENST00000485627 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
CTSA-208ENST00000485627 WDR7Q9Y4E6 1490 aa14.14□□□□□ -0.15
CTSA-208ENST00000485627 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
CTSA-208ENST00000485627 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
CTSA-208ENST00000485627 ZNF644Q9H582 1327 aaPredicted RBP14.13□□□□□ -0.15
CTSA-208ENST00000485627 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
CTSA-208ENST00000485627 RAB3GAP2Q9H2M9 1393 aa14.11□□□□□ -0.15
CTSA-208ENST00000485627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.11□□□□□ -0.15
CTSA-208ENST00000485627 CD109Q6YHK3 1445 aa14.11□□□□□ -0.15
CTSA-208ENST00000485627 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
CTSA-208ENST00000485627 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
CTSA-208ENST00000485627 DAPK1P53355 1430 aa14.09□□□□□ -0.15
CTSA-208ENST00000485627 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
CTSA-208ENST00000485627 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
CTSA-208ENST00000485627 TTC37Q6PGP7 1564 aa14.09□□□□□ -0.15
CTSA-208ENST00000485627 EFCAB2Q5VUJ9 269 aa14.08□□□□□ -0.16
CTSA-208ENST00000485627 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
CTSA-208ENST00000485627 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 ABCC5O15440 1437 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 TSPY4P0CV99 314 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 TSPY10P0CW01 314 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 RSPH4AQ5TD94 716 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
CTSA-208ENST00000485627 PLCH2O75038 1416 aa14.07□□□□□ -0.16
CTSA-208ENST00000485627 PTPRMP28827 1452 aa14.06□□□□□ -0.16
CTSA-208ENST00000485627 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
CTSA-208ENST00000485627 MYO5CQ9NQX4 1742 aa14.05□□□□□ -0.16
CTSA-208ENST00000485627 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
CTSA-208ENST00000485627 AKNAQ7Z591 1439 aa14.05□□□□□ -0.16
CTSA-208ENST00000485627 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
CTSA-208ENST00000485627 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
CTSA-208ENST00000485627 NAIPQ13075 1403 aa14.04□□□□□ -0.16
CTSA-208ENST00000485627 LMTK3Q96Q04 1460 aa14.04□□□□□ -0.16
CTSA-208ENST00000485627 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
CTSA-208ENST00000485627 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
CTSA-208ENST00000485627 ANKRD30AQ9BXX3 1397 aa14.02□□□□□ -0.17
CTSA-208ENST00000485627 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
CTSA-208ENST00000485627 RAPGEF3O95398 923 aa14.02□□□□□ -0.17
CTSA-208ENST00000485627 HSPA2P54652 639 aa14.02□□□□□ -0.17
CTSA-208ENST00000485627 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
CTSA-208ENST00000485627 ARAP3Q8WWN8 1544 aa14.01□□□□□ -0.17
CTSA-208ENST00000485627 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
CTSA-208ENST00000485627 ILDR2Q71H61 639 aa14.01□□□□□ -0.17
CTSA-208ENST00000485627 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
CTSA-208ENST00000485627 SAMD9LQ8IVG5 1584 aa14□□□□□ -0.17
CTSA-208ENST00000485627 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
CTSA-208ENST00000485627 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
CTSA-208ENST00000485627 SHANK2Q9UPX8 1470 aa13.99□□□□□ -0.17
CTSA-208ENST00000485627 C9orf84Q5VXU9 1444 aa13.99□□□□□ -0.17
CTSA-208ENST00000485627 MBD5Q9P267 1494 aa13.99□□□□□ -0.17
CTSA-208ENST00000485627 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
CTSA-208ENST00000485627 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
CTSA-208ENST00000485627 ADGRL2O95490 1459 aa13.98□□□□□ -0.17
CTSA-208ENST00000485627 MADDQ8WXG6 1647 aa13.97□□□□□ -0.17
CTSA-208ENST00000485627 ARID4BQ4LE39 1312 aaPredicted RBP13.97□□□□□ -0.17
CTSA-208ENST00000485627 FANCAO15360 1455 aa13.97□□□□□ -0.17
CTSA-208ENST00000485627 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
CTSA-208ENST00000485627 GCC2Q8IWJ2 1684 aa13.97□□□□□ -0.17
CTSA-208ENST00000485627 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
CTSA-208ENST00000485627 ADGBQ8N7X0 1667 aa13.95□□□□□ -0.18
CTSA-208ENST00000485627 ABCC1P33527 1531 aa13.94□□□□□ -0.18
CTSA-208ENST00000485627 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
CTSA-208ENST00000485627 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
CTSA-208ENST00000485627 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
CTSA-208ENST00000485627 KIF15Q9NS87 1388 aa13.92□□□□□ -0.18
CTSA-208ENST00000485627 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
CTSA-208ENST00000485627 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
CTSA-208ENST00000485627 DISP3Q9P2K9 1392 aa13.91□□□□□ -0.18
CTSA-208ENST00000485627 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
CTSA-208ENST00000485627 RIMS1Q86UR5 1692 aaKnown RBP13.91□□□□□ -0.18
CTSA-208ENST00000485627 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
CTSA-208ENST00000485627 SCAPERQ9BY12 1400 aa13.9□□□□□ -0.18
CTSA-208ENST00000485627 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
CTSA-208ENST00000485627 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
CTSA-208ENST00000485627 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
CTSA-208ENST00000485627 TRAPPC8Q9Y2L5 1435 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms