RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
UBA3-210ENST00000485424 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
UBA3-210ENST00000485424 KIF14Q15058 1648 aa21.98■■□□□ 1.11
UBA3-210ENST00000485424 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
UBA3-210ENST00000485424 ARHGAP35Q9NRY4 1499 aa21.94■■□□□ 1.1
UBA3-210ENST00000485424 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
UBA3-210ENST00000485424 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
UBA3-210ENST00000485424 FMN1Q68DA7 1419 aa21.91■■□□□ 1.1
UBA3-210ENST00000485424 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
UBA3-210ENST00000485424 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
UBA3-210ENST00000485424 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
UBA3-210ENST00000485424 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
UBA3-210ENST00000485424 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.1
UBA3-210ENST00000485424 YEATS2Q9ULM3 1422 aa21.89■■□□□ 1.1
UBA3-210ENST00000485424 PLCH2O75038 1416 aa21.88■■□□□ 1.09
UBA3-210ENST00000485424 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
UBA3-210ENST00000485424 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.09
UBA3-210ENST00000485424 PREX1Q8TCU6 1659 aa21.83■■□□□ 1.09
UBA3-210ENST00000485424 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.08
UBA3-210ENST00000485424 KDM5CP41229 1560 aa21.82■■□□□ 1.08
UBA3-210ENST00000485424 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
UBA3-210ENST00000485424 ARHGAP5Q13017 1502 aa21.8■■□□□ 1.08
UBA3-210ENST00000485424 ARHGEF12Q9NZN5 1544 aa21.8■■□□□ 1.08
UBA3-210ENST00000485424 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
UBA3-210ENST00000485424 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
UBA3-210ENST00000485424 ABCA6Q8N139 1617 aa21.77■■□□□ 1.08
UBA3-210ENST00000485424 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
UBA3-210ENST00000485424 DIP2CQ9Y2E4 1556 aa21.77■■□□□ 1.08
UBA3-210ENST00000485424 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.07
UBA3-210ENST00000485424 ATP10AO60312 1499 aa21.76■■□□□ 1.07
UBA3-210ENST00000485424 CLIP1P30622 1438 aa21.75■■□□□ 1.07
UBA3-210ENST00000485424 SETD1BQ9UPS6 1966 aaKnown RBP21.74■■□□□ 1.07
UBA3-210ENST00000485424 REREQ9P2R6 1566 aa21.73■■□□□ 1.07
UBA3-210ENST00000485424 ABCC1P33527 1531 aa21.72■■□□□ 1.07
UBA3-210ENST00000485424 CDK11AQ9UQ88 783 aaPredicted RBP21.72■■□□□ 1.07
UBA3-210ENST00000485424 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
UBA3-210ENST00000485424 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
UBA3-210ENST00000485424 C3P01024 1663 aa21.71■■□□□ 1.07
UBA3-210ENST00000485424 KIDINS220Q9ULH0 1771 aa21.7■■□□□ 1.06
UBA3-210ENST00000485424 STRCQ7RTU9 1775 aa21.69■■□□□ 1.06
UBA3-210ENST00000485424 MLECQ14165 292 aa21.68■■□□□ 1.06
UBA3-210ENST00000485424 FBXO41Q8TF61 875 aa21.68■■□□□ 1.06
UBA3-210ENST00000485424 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
UBA3-210ENST00000485424 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
UBA3-210ENST00000485424 HSPA2P54652 639 aa21.65■■□□□ 1.06
UBA3-210ENST00000485424 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
UBA3-210ENST00000485424 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
UBA3-210ENST00000485424 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
UBA3-210ENST00000485424 AGLP35573 1532 aa21.59■■□□□ 1.05
UBA3-210ENST00000485424 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.05
UBA3-210ENST00000485424 TRAPPC8Q9Y2L5 1435 aa21.58■■□□□ 1.05
UBA3-210ENST00000485424 MROH2AA6NES4 1674 aa21.58■■□□□ 1.05
UBA3-210ENST00000485424 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
UBA3-210ENST00000485424 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
UBA3-210ENST00000485424 CEBPAP49715 358 aaPredicted RBP21.51■■□□□ 1.03
UBA3-210ENST00000485424 MYT1LQ9UL68 1186 aa21.51■■□□□ 1.03
UBA3-210ENST00000485424 UHRF1BP1Q6BDS2 1440 aa21.5■■□□□ 1.03
UBA3-210ENST00000485424 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
UBA3-210ENST00000485424 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
UBA3-210ENST00000485424 ATP7AQ04656 1500 aa21.48■■□□□ 1.03
UBA3-210ENST00000485424 GPATCH8Q9UKJ3 1502 aaKnown RBP21.48■■□□□ 1.03
UBA3-210ENST00000485424 PLXNC1O60486 1568 aa21.48■■□□□ 1.03
UBA3-210ENST00000485424 ZNF142P52746 1687 aaPredicted RBP21.45■■□□□ 1.02
UBA3-210ENST00000485424 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
UBA3-210ENST00000485424 MYO3AQ8NEV4 1616 aa21.42■■□□□ 1.02
UBA3-210ENST00000485424 CNTLNQ9NXG0 1405 aa21.41■■□□□ 1.02
UBA3-210ENST00000485424 CERKQ8TCT0 537 aa21.41■■□□□ 1.02
UBA3-210ENST00000485424 EHBP1L1Q8N3D4 1523 aa21.4■■□□□ 1.02
UBA3-210ENST00000485424 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
UBA3-210ENST00000485424 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
UBA3-210ENST00000485424 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
UBA3-210ENST00000485424 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
UBA3-210ENST00000485424 CAMSAP1Q5T5Y3 1602 aa21.35■■□□□ 1.01
UBA3-210ENST00000485424 CCNB3Q8WWL7 1395 aa21.35■■□□□ 1.01
UBA3-210ENST00000485424 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
UBA3-210ENST00000485424 PTPRTO14522 1441 aa21.34■■□□□ 1.01
UBA3-210ENST00000485424 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
UBA3-210ENST00000485424 A2MP01023 1474 aa21.33■■□□□ 1.01
UBA3-210ENST00000485424 NPATQ14207 1427 aa21.33■■□□□ 1.01
UBA3-210ENST00000485424 NCOA1Q15788 1441 aa21.33■■□□□ 1.01
UBA3-210ENST00000485424 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 1
UBA3-210ENST00000485424 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
UBA3-210ENST00000485424 LTBP4Q8N2S1 1624 aa21.32■■□□□ 1
UBA3-210ENST00000485424 POLR1AO95602 1720 aaPredicted RBP21.3■■□□□ 1
UBA3-210ENST00000485424 CFDP1Q9UEE9 299 aaPredicted RBP21.3■■□□□ 1
UBA3-210ENST00000485424 CEP170BQ9Y4F5 1589 aaPredicted RBP21.3■■□□□ 1
UBA3-210ENST00000485424 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
UBA3-210ENST00000485424 ZMYM3Q14202 1370 aa21.26■□□□□ 0.99
UBA3-210ENST00000485424 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
UBA3-210ENST00000485424 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
UBA3-210ENST00000485424 IQSEC2Q5JU85 1478 aa21.22■□□□□ 0.99
UBA3-210ENST00000485424 CAMSAP2Q08AD1 1489 aa21.21■□□□□ 0.99
UBA3-210ENST00000485424 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
UBA3-210ENST00000485424 DNMT1P26358 1616 aaKnown RBP21.21■□□□□ 0.99
UBA3-210ENST00000485424 PLA2R1Q13018 1463 aa21.2■□□□□ 0.98
UBA3-210ENST00000485424 RTEL1-TNFRSF6BF6WH68 1400 aa21.2■□□□□ 0.98
UBA3-210ENST00000485424 NCOA2Q15596 1464 aa21.2■□□□□ 0.98
UBA3-210ENST00000485424 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
UBA3-210ENST00000485424 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
UBA3-210ENST00000485424 FAM135AQ9P2D6 1515 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms