RNA–Protein interactions for RNA: ENST00000485194.1

ATP13A3-208, Transcript of ATPase 13A3, humanhuman

TSL 5

Gene ATP13A3, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-208ENST00000485194 OCEL1Q9H607 264 aa11.67□□□□□ -0.54
ATP13A3-208ENST00000485194 PDE4AP27815 886 aa11.66□□□□□ -0.54
ATP13A3-208ENST00000485194 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
ATP13A3-208ENST00000485194 ILDR1Q86SU0 546 aaPredicted RBP11.64□□□□□ -0.55
ATP13A3-208ENST00000485194 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
ATP13A3-208ENST00000485194 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
ATP13A3-208ENST00000485194 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
ATP13A3-208ENST00000485194 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
ATP13A3-208ENST00000485194 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
ATP13A3-208ENST00000485194 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
ATP13A3-208ENST00000485194 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
ATP13A3-208ENST00000485194 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
ATP13A3-208ENST00000485194 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
ATP13A3-208ENST00000485194 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
ATP13A3-208ENST00000485194 E2F4Q16254 413 aa11.55□□□□□ -0.56
ATP13A3-208ENST00000485194 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
ATP13A3-208ENST00000485194 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
ATP13A3-208ENST00000485194 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
ATP13A3-208ENST00000485194 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
ATP13A3-208ENST00000485194 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
ATP13A3-208ENST00000485194 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
ATP13A3-208ENST00000485194 MFSD10Q14728 455 aa11.49□□□□□ -0.57
ATP13A3-208ENST00000485194 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
ATP13A3-208ENST00000485194 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-208ENST00000485194 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
ATP13A3-208ENST00000485194 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
ATP13A3-208ENST00000485194 DSG2Q14126 1118 aa11.42□□□□□ -0.58
ATP13A3-208ENST00000485194 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
ATP13A3-208ENST00000485194 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
ATP13A3-208ENST00000485194 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
ATP13A3-208ENST00000485194 FOXK1P85037 733 aa11.39□□□□□ -0.59
ATP13A3-208ENST00000485194 PLPP6Q8IY26 295 aa11.39□□□□□ -0.59
ATP13A3-208ENST00000485194 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
ATP13A3-208ENST00000485194 ST18O60284 1047 aa11.36□□□□□ -0.59
ATP13A3-208ENST00000485194 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
ATP13A3-208ENST00000485194 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
ATP13A3-208ENST00000485194 KIF3CO14782 793 aa11.34□□□□□ -0.59
ATP13A3-208ENST00000485194 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
ATP13A3-208ENST00000485194 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
ATP13A3-208ENST00000485194 DPYSL4O14531 572 aa11.31□□□□□ -0.6
ATP13A3-208ENST00000485194 SEMA3EO15041 775 aa11.31□□□□□ -0.6
ATP13A3-208ENST00000485194 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
ATP13A3-208ENST00000485194 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
ATP13A3-208ENST00000485194 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
ATP13A3-208ENST00000485194 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
ATP13A3-208ENST00000485194 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATP13A3-208ENST00000485194 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
ATP13A3-208ENST00000485194 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
ATP13A3-208ENST00000485194 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
ATP13A3-208ENST00000485194 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
ATP13A3-208ENST00000485194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATP13A3-208ENST00000485194 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
ATP13A3-208ENST00000485194 TBC1D12O60347 775 aa11.23□□□□□ -0.61
ATP13A3-208ENST00000485194 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
ATP13A3-208ENST00000485194 PDIA6Q15084 440 aa11.21□□□□□ -0.61
ATP13A3-208ENST00000485194 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
ATP13A3-208ENST00000485194 MLLT3P42568 568 aaPredicted RBP11.17□□□□□ -0.62
ATP13A3-208ENST00000485194 GRXCR2A6NFK2 248 aa11.15□□□□□ -0.62
ATP13A3-208ENST00000485194 EVI5O60447 810 aa11.14□□□□□ -0.63
ATP13A3-208ENST00000485194 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
ATP13A3-208ENST00000485194 SNPHO15079 494 aa11.12□□□□□ -0.63
ATP13A3-208ENST00000485194 SLC34A2O95436 690 aa11.12□□□□□ -0.63
ATP13A3-208ENST00000485194 MARVELD3Q96A59 401 aa11.12□□□□□ -0.63
ATP13A3-208ENST00000485194 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
ATP13A3-208ENST00000485194 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
ATP13A3-208ENST00000485194 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
ATP13A3-208ENST00000485194 DDX12PQ92771 950 aa11.09□□□□□ -0.63
ATP13A3-208ENST00000485194 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
ATP13A3-208ENST00000485194 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
ATP13A3-208ENST00000485194 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
ATP13A3-208ENST00000485194 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
ATP13A3-208ENST00000485194 PTGER2P43116 358 aa11.04□□□□□ -0.64
ATP13A3-208ENST00000485194 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
ATP13A3-208ENST00000485194 ARSIQ5FYB1 569 aa11□□□□□ -0.65
ATP13A3-208ENST00000485194 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
ATP13A3-208ENST00000485194 OSBPP22059 807 aa10.99□□□□□ -0.65
ATP13A3-208ENST00000485194 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
ATP13A3-208ENST00000485194 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
ATP13A3-208ENST00000485194 NUDT7P0C024 238 aa10.98□□□□□ -0.65
ATP13A3-208ENST00000485194 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
ATP13A3-208ENST00000485194 PHF14O94880 888 aa10.97□□□□□ -0.65
ATP13A3-208ENST00000485194 EPAS1Q99814 870 aa10.97□□□□□ -0.65
ATP13A3-208ENST00000485194 ZMYND10O75800 440 aa10.96□□□□□ -0.65
ATP13A3-208ENST00000485194 EMP3P54852 163 aa10.96□□□□□ -0.65
ATP13A3-208ENST00000485194 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.657e-7■□□□□ 10.1
ATP13A3-208ENST00000485194 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
ATP13A3-208ENST00000485194 MAP3K7O43318 606 aa10.95□□□□□ -0.66
ATP13A3-208ENST00000485194 SLC24A3Q9HC58 644 aa10.95□□□□□ -0.66
ATP13A3-208ENST00000485194 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
ATP13A3-208ENST00000485194 TYW1BQ6NUM6 668 aa10.94□□□□□ -0.66
ATP13A3-208ENST00000485194 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
ATP13A3-208ENST00000485194 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
ATP13A3-208ENST00000485194 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
ATP13A3-208ENST00000485194 ZNF454Q8N9F8 522 aa10.93□□□□□ -0.66
ATP13A3-208ENST00000485194 JPH4Q96JJ6 628 aa10.93□□□□□ -0.66
ATP13A3-208ENST00000485194 PCDHGA10Q9Y5H3 936 aa10.93□□□□□ -0.66
ATP13A3-208ENST00000485194 FCHSD2O94868 740 aa10.92□□□□□ -0.66
ATP13A3-208ENST00000485194 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
ATP13A3-208ENST00000485194 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
ATP13A3-208ENST00000485194 HS3ST6Q96QI5 342 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms