RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 PLA2G2EQ9NZK7 142 aa13.58□□□□□ -0.24
VPS8-223ENST00000485024 MS4A4AQ96JQ5 239 aa13.57□□□□□ -0.24
VPS8-223ENST00000485024 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
VPS8-223ENST00000485024 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
VPS8-223ENST00000485024 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
VPS8-223ENST00000485024 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
VPS8-223ENST00000485024 SOX12O15370 315 aa13.45□□□□□ -0.26
VPS8-223ENST00000485024 HCSTQ9UBK5 93 aa13.45□□□□□ -0.26
VPS8-223ENST00000485024 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
VPS8-223ENST00000485024 PBX2P40425 430 aa13.44□□□□□ -0.26
VPS8-223ENST00000485024 NUDT7P0C024 238 aa13.4□□□□□ -0.26
VPS8-223ENST00000485024 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
VPS8-223ENST00000485024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
VPS8-223ENST00000485024 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
VPS8-223ENST00000485024 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
VPS8-223ENST00000485024 ADGRD1Q6QNK2 874 aa13.32□□□□□ -0.28
VPS8-223ENST00000485024 RNF25Q96BH1 459 aaPredicted RBP13.32□□□□□ -0.28
VPS8-223ENST00000485024 KIF3CO14782 793 aa13.31□□□□□ -0.28
VPS8-223ENST00000485024 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
VPS8-223ENST00000485024 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
VPS8-223ENST00000485024 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.29
VPS8-223ENST00000485024 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
VPS8-223ENST00000485024 ARHGAP33O14559 1287 aa13.23□□□□□ -0.29
VPS8-223ENST00000485024 HRO43593 1189 aa13.22□□□□□ -0.29
VPS8-223ENST00000485024 NLRP6P59044 892 aa13.22□□□□□ -0.29
VPS8-223ENST00000485024 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
VPS8-223ENST00000485024 SLC34A2O95436 690 aa13.21□□□□□ -0.29
VPS8-223ENST00000485024 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
VPS8-223ENST00000485024 TK2O00142 265 aa13.17□□□□□ -0.3
VPS8-223ENST00000485024 KCTD12Q96CX2 325 aaKnown RBP13.17□□□□□ -0.3
VPS8-223ENST00000485024 PSEN2P49810 448 aa13.15□□□□□ -0.3
VPS8-223ENST00000485024 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
VPS8-223ENST00000485024 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
VPS8-223ENST00000485024 IRX2Q9BZI1 471 aaPredicted RBP13.09□□□□□ -0.31
VPS8-223ENST00000485024 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
VPS8-223ENST00000485024 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
VPS8-223ENST00000485024 RGS20O76081 388 aa13.05□□□□□ -0.32
VPS8-223ENST00000485024 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
VPS8-223ENST00000485024 PTPN5P54829 565 aa13.01□□□□□ -0.33
VPS8-223ENST00000485024 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
VPS8-223ENST00000485024 STK24Q9Y6E0 443 aa13.01□□□□□ -0.33
VPS8-223ENST00000485024 A0A0G2JS52 829 aa12.98□□□□□ -0.33
VPS8-223ENST00000485024 PTCD2Q8WV60 388 aaKnown RBP12.96□□□□□ -0.33
VPS8-223ENST00000485024 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
VPS8-223ENST00000485024 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
VPS8-223ENST00000485024 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
VPS8-223ENST00000485024 VPS9D1Q9Y2B5 631 aa12.93□□□□□ -0.34
VPS8-223ENST00000485024 STK25O00506 426 aa12.88□□□□□ -0.35
VPS8-223ENST00000485024 THSD4Q6ZMP0 1018 aa12.88□□□□□ -0.35
VPS8-223ENST00000485024 PPP1R37O75864 691 aa12.86□□□□□ -0.35
VPS8-223ENST00000485024 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
VPS8-223ENST00000485024 BHMG1C9JSJ3 638 aaPredicted RBP12.81□□□□□ -0.36
VPS8-223ENST00000485024 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
VPS8-223ENST00000485024 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
VPS8-223ENST00000485024 FOXK1P85037 733 aa12.8□□□□□ -0.36
VPS8-223ENST00000485024 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
VPS8-223ENST00000485024 Q6ZNB5 142 aa12.77□□□□□ -0.37
VPS8-223ENST00000485024 WNT2BQ93097 391 aa12.76□□□□□ -0.37
VPS8-223ENST00000485024 DSG2Q14126 1118 aa12.74□□□□□ -0.37
VPS8-223ENST00000485024 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
VPS8-223ENST00000485024 TBC1D12O60347 775 aa12.72□□□□□ -0.37
VPS8-223ENST00000485024 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
VPS8-223ENST00000485024 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
VPS8-223ENST00000485024 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
VPS8-223ENST00000485024 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
VPS8-223ENST00000485024 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
VPS8-223ENST00000485024 LCE2BO14633 110 aa12.68□□□□□ -0.38
VPS8-223ENST00000485024 ITGBL1O95965 494 aaPredicted RBP12.66□□□□□ -0.38
VPS8-223ENST00000485024 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
VPS8-223ENST00000485024 PTPREP23469 700 aa12.63□□□□□ -0.39
VPS8-223ENST00000485024 FOSBP53539 338 aa12.63□□□□□ -0.39
VPS8-223ENST00000485024 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS8-223ENST00000485024 RGL2O15211 777 aa12.58□□□□□ -0.4
VPS8-223ENST00000485024 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
VPS8-223ENST00000485024 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
VPS8-223ENST00000485024 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
VPS8-223ENST00000485024 BCAMP50895 628 aa12.52□□□□□ -0.41
VPS8-223ENST00000485024 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
VPS8-223ENST00000485024 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
VPS8-223ENST00000485024 ANKK1Q8NFD2 765 aa12.5□□□□□ -0.41
VPS8-223ENST00000485024 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
VPS8-223ENST00000485024 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
VPS8-223ENST00000485024 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
VPS8-223ENST00000485024 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
VPS8-223ENST00000485024 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
VPS8-223ENST00000485024 SOWAHBA6NEL2 793 aa12.44□□□□□ -0.42
VPS8-223ENST00000485024 GFRA3O60609 400 aa12.44□□□□□ -0.42
VPS8-223ENST00000485024 KCNC4Q03721 635 aa12.44□□□□□ -0.42
VPS8-223ENST00000485024 PKD2Q13563 968 aa12.43□□□□□ -0.42
VPS8-223ENST00000485024 WBP1LQ9NX94 342 aa12.43□□□□□ -0.42
VPS8-223ENST00000485024 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
VPS8-223ENST00000485024 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
VPS8-223ENST00000485024 EVI5O60447 810 aa12.41□□□□□ -0.42
VPS8-223ENST00000485024 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
VPS8-223ENST00000485024 COL9A1P20849 921 aa12.4□□□□□ -0.42
VPS8-223ENST00000485024 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
VPS8-223ENST00000485024 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
VPS8-223ENST00000485024 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
VPS8-223ENST00000485024 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
VPS8-223ENST00000485024 NRG2O14511 850 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms