RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 GPR153Q6NV75 609 aa13.48□□□□□ -0.25
RC3H1-205ENST00000484867 NLRP6P59044 892 aa13.47□□□□□ -0.25
RC3H1-205ENST00000484867 ERBB3P21860 1342 aa13.46□□□□□ -0.25
RC3H1-205ENST00000484867 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
RC3H1-205ENST00000484867 MFRPQ9BY79 579 aa13.45□□□□□ -0.26
RC3H1-205ENST00000484867 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
RC3H1-205ENST00000484867 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
RC3H1-205ENST00000484867 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
RC3H1-205ENST00000484867 PKD2Q13563 968 aa13.4□□□□□ -0.26
RC3H1-205ENST00000484867 KIF3CO14782 793 aa13.38□□□□□ -0.27
RC3H1-205ENST00000484867 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
RC3H1-205ENST00000484867 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
RC3H1-205ENST00000484867 STK25O00506 426 aa13.35□□□□□ -0.27
RC3H1-205ENST00000484867 RGL2O15211 777 aa13.34□□□□□ -0.27
RC3H1-205ENST00000484867 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
RC3H1-205ENST00000484867 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
RC3H1-205ENST00000484867 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
RC3H1-205ENST00000484867 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
RC3H1-205ENST00000484867 SLC34A2O95436 690 aa13.22□□□□□ -0.29
RC3H1-205ENST00000484867 PPP1R37O75864 691 aa13.21□□□□□ -0.29
RC3H1-205ENST00000484867 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
RC3H1-205ENST00000484867 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
RC3H1-205ENST00000484867 NUDT7P0C024 238 aa13.15□□□□□ -0.3
RC3H1-205ENST00000484867 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
RC3H1-205ENST00000484867 PTGER2P43116 358 aa13.13□□□□□ -0.31
RC3H1-205ENST00000484867 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
RC3H1-205ENST00000484867 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
RC3H1-205ENST00000484867 LSM11P83369 360 aaKnown RBP eCLIP13.12□□□□□ -0.31
RC3H1-205ENST00000484867 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
RC3H1-205ENST00000484867 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
RC3H1-205ENST00000484867 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
RC3H1-205ENST00000484867 PBX2P40425 430 aa13.08□□□□□ -0.32
RC3H1-205ENST00000484867 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
RC3H1-205ENST00000484867 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
RC3H1-205ENST00000484867 FOXK1P85037 733 aa13.02□□□□□ -0.33
RC3H1-205ENST00000484867 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
RC3H1-205ENST00000484867 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
RC3H1-205ENST00000484867 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
RC3H1-205ENST00000484867 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
RC3H1-205ENST00000484867 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
RC3H1-205ENST00000484867 DSG2Q14126 1118 aa12.95□□□□□ -0.34
RC3H1-205ENST00000484867 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
RC3H1-205ENST00000484867 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
RC3H1-205ENST00000484867 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
RC3H1-205ENST00000484867 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
RC3H1-205ENST00000484867 TK2O00142 265 aa12.86□□□□□ -0.35
RC3H1-205ENST00000484867 HRO43593 1189 aa12.86□□□□□ -0.35
RC3H1-205ENST00000484867 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
RC3H1-205ENST00000484867 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
RC3H1-205ENST00000484867 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
RC3H1-205ENST00000484867 PSEN2P49810 448 aa12.84□□□□□ -0.35
RC3H1-205ENST00000484867 TBC1D12O60347 775 aa12.81□□□□□ -0.36
RC3H1-205ENST00000484867 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
RC3H1-205ENST00000484867 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
RC3H1-205ENST00000484867 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
RC3H1-205ENST00000484867 RYDENQ9NUL5 291 aaKnown RBP12.76□□□□□ -0.37
RC3H1-205ENST00000484867 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
RC3H1-205ENST00000484867 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
RC3H1-205ENST00000484867 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
RC3H1-205ENST00000484867 KCNK17Q96T54 332 aa12.71□□□□□ -0.37
RC3H1-205ENST00000484867 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
RC3H1-205ENST00000484867 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.37
RC3H1-205ENST00000484867 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
RC3H1-205ENST00000484867 FOSBP53539 338 aa12.69□□□□□ -0.38
RC3H1-205ENST00000484867 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
RC3H1-205ENST00000484867 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
RC3H1-205ENST00000484867 PDE4AP27815 886 aa12.67□□□□□ -0.38
RC3H1-205ENST00000484867 ZNF454Q8N9F8 522 aa12.66□□□□□ -0.38
RC3H1-205ENST00000484867 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
RC3H1-205ENST00000484867 MFSD10Q14728 455 aa12.63□□□□□ -0.39
RC3H1-205ENST00000484867 KCTD12Q96CX2 325 aaKnown RBP12.63□□□□□ -0.39
RC3H1-205ENST00000484867 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
RC3H1-205ENST00000484867 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
RC3H1-205ENST00000484867 EVI5O60447 810 aa12.59□□□□□ -0.39
RC3H1-205ENST00000484867 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
RC3H1-205ENST00000484867 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
RC3H1-205ENST00000484867 PTPREP23469 700 aa12.56□□□□□ -0.4
RC3H1-205ENST00000484867 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
RC3H1-205ENST00000484867 ADAM33Q9BZ11 813 aa12.56□□□□□ -0.4
RC3H1-205ENST00000484867 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
RC3H1-205ENST00000484867 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
RC3H1-205ENST00000484867 ZDHHC16Q969W1 377 aa12.54□□□□□ -0.4
RC3H1-205ENST00000484867 CADPS2Q86UW7 1296 aa12.52□□□□□ -0.41
RC3H1-205ENST00000484867 THSD4Q6ZMP0 1018 aa12.5□□□□□ -0.41
RC3H1-205ENST00000484867 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
RC3H1-205ENST00000484867 PTPN5P54829 565 aa12.48□□□□□ -0.41
RC3H1-205ENST00000484867 MAP3K9P80192 1104 aa12.48□□□□□ -0.41
RC3H1-205ENST00000484867 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
RC3H1-205ENST00000484867 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
RC3H1-205ENST00000484867 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
RC3H1-205ENST00000484867 CAMK2BQ13554 666 aa12.43□□□□□ -0.42
RC3H1-205ENST00000484867 WNT2BQ93097 391 aa12.43□□□□□ -0.42
RC3H1-205ENST00000484867 COL9A1P20849 921 aa12.42□□□□□ -0.42
RC3H1-205ENST00000484867 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
RC3H1-205ENST00000484867 PHF14O94880 888 aa12.39□□□□□ -0.43
RC3H1-205ENST00000484867 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
RC3H1-205ENST00000484867 RABGEF1Q9UJ41 708 aa12.39□□□□□ -0.43
RC3H1-205ENST00000484867 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
RC3H1-205ENST00000484867 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
RC3H1-205ENST00000484867 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms