RNA–Protein interactions for RNA: ENST00000484700.1

GYPC-206, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 5

Gene GYPC, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-206ENST00000484700 ZFYVE16Q7Z3T8 1539 aa29.25■■■□□ 2.27
GYPC-206ENST00000484700 PCF11O94913 1555 aaKnown RBP29.24■■■□□ 2.27
GYPC-206ENST00000484700 POGZQ7Z3K3 1410 aa29.24■■■□□ 2.27
GYPC-206ENST00000484700 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
GYPC-206ENST00000484700 PTPRMP28827 1452 aa29.22■■■□□ 2.27
GYPC-206ENST00000484700 ARHGAP5Q13017 1502 aa29.21■■■□□ 2.27
GYPC-206ENST00000484700 LRRIQ1Q96JM4 1722 aa29.21■■■□□ 2.27
GYPC-206ENST00000484700 FYCO1Q9BQS8 1478 aa29.2■■■□□ 2.26
GYPC-206ENST00000484700 YEATS2Q9ULM3 1422 aa29.19■■■□□ 2.26
GYPC-206ENST00000484700 MADDQ8WXG6 1647 aa29.14■■■□□ 2.26
GYPC-206ENST00000484700 ZNF518AQ6AHZ1 1483 aa29.13■■■□□ 2.25
GYPC-206ENST00000484700 MYT1LQ9UL68 1186 aa29.11■■■□□ 2.25
GYPC-206ENST00000484700 ATP10AO60312 1499 aa29.1■■■□□ 2.25
GYPC-206ENST00000484700 AFAP1Q8N556 730 aa29.08■■■□□ 2.25
GYPC-206ENST00000484700 MLECQ14165 292 aa29.07■■■□□ 2.24
GYPC-206ENST00000484700 C9orf84Q5VXU9 1444 aa29.06■■■□□ 2.24
GYPC-206ENST00000484700 PREX2Q70Z35 1606 aa29.05■■■□□ 2.24
GYPC-206ENST00000484700 CDC42BPBQ9Y5S2 1711 aa29.04■■■□□ 2.24
GYPC-206ENST00000484700 RIMS1Q86UR5 1692 aaKnown RBP29.04■■■□□ 2.24
GYPC-206ENST00000484700 KDM5CP41229 1560 aa29.01■■■□□ 2.24
GYPC-206ENST00000484700 PLPPR3Q6T4P5 718 aa29■■■□□ 2.23
GYPC-206ENST00000484700 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
GYPC-206ENST00000484700 ZNF777Q9ULD5 760 aaPredicted RBP28.97■■■□□ 2.23
GYPC-206ENST00000484700 ABCC1P33527 1531 aa28.97■■■□□ 2.23
GYPC-206ENST00000484700 MTUS2Q5JR59 1369 aa28.96■■■□□ 2.23
GYPC-206ENST00000484700 MLH3Q9UHC1 1453 aa28.96■■■□□ 2.23
GYPC-206ENST00000484700 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
GYPC-206ENST00000484700 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
GYPC-206ENST00000484700 CDC42BPAQ5VT25 1732 aa28.94■■■□□ 2.22
GYPC-206ENST00000484700 ARHGEF12Q9NZN5 1544 aa28.93■■■□□ 2.22
GYPC-206ENST00000484700 GPATCH8Q9UKJ3 1502 aaKnown RBP28.92■■■□□ 2.22
GYPC-206ENST00000484700 FER1L4A9Z1Z3 1794 aa28.92■■■□□ 2.22
GYPC-206ENST00000484700 CCNB3Q8WWL7 1395 aa28.91■■■□□ 2.22
GYPC-206ENST00000484700 ITSN2Q9NZM3 1697 aa28.9■■■□□ 2.22
GYPC-206ENST00000484700 CFDP1Q9UEE9 299 aaPredicted RBP28.9■■■□□ 2.22
GYPC-206ENST00000484700 DIP2CQ9Y2E4 1556 aa28.89■■■□□ 2.22
GYPC-206ENST00000484700 LMTK3Q96Q04 1460 aa28.89■■■□□ 2.22
GYPC-206ENST00000484700 ILDR1Q86SU0 546 aaPredicted RBP28.87■■■□□ 2.21
GYPC-206ENST00000484700 REREQ9P2R6 1566 aa28.87■■■□□ 2.21
GYPC-206ENST00000484700 PLEKHH2Q8IVE3 1493 aa28.85■■■□□ 2.21
GYPC-206ENST00000484700 ABCA6Q8N139 1617 aa28.84■■■□□ 2.21
GYPC-206ENST00000484700 HNRNPMP52272 730 aaKnown RBP eCLIP28.83■■■□□ 2.211e-8■■■■■ 30.5
GYPC-206ENST00000484700 SPAG9O60271 1321 aaKnown RBP28.83■■■□□ 2.21
GYPC-206ENST00000484700 SAMD9LQ8IVG5 1584 aa28.83■■■□□ 2.21
GYPC-206ENST00000484700 ESF1Q9H501 851 aaKnown RBP28.82■■■□□ 2.2
GYPC-206ENST00000484700 KIAA1107Q9UPP5 1409 aa28.82■■■□□ 2.2
GYPC-206ENST00000484700 SYCP2Q9BX26 1530 aa28.81■■■□□ 2.2
GYPC-206ENST00000484700 EHBP1L1Q8N3D4 1523 aa28.8■■■□□ 2.2
GYPC-206ENST00000484700 AGLP35573 1532 aa28.79■■■□□ 2.2
GYPC-206ENST00000484700 HSPA2P54652 639 aa28.78■■■□□ 2.2
GYPC-206ENST00000484700 KIDINS220Q9ULH0 1771 aa28.78■■■□□ 2.2
GYPC-206ENST00000484700 CEBPAP49715 358 aaPredicted RBP28.77■■■□□ 2.2
GYPC-206ENST00000484700 LOC105371045A0A1W2PR82 267 aa28.74■■■□□ 2.19
GYPC-206ENST00000484700 TIAM1Q13009 1591 aa28.7■■■□□ 2.18
GYPC-206ENST00000484700 ATP7AQ04656 1500 aa28.69■■■□□ 2.18
GYPC-206ENST00000484700 CNTLNQ9NXG0 1405 aa28.68■■■□□ 2.18
GYPC-206ENST00000484700 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
GYPC-206ENST00000484700 PREX1Q8TCU6 1659 aa28.66■■■□□ 2.18
GYPC-206ENST00000484700 UHRF1BP1Q6BDS2 1440 aa28.64■■■□□ 2.18
GYPC-206ENST00000484700 VPS8Q8N3P4 1428 aa28.64■■■□□ 2.18
GYPC-206ENST00000484700 NCOA2Q15596 1464 aa28.63■■■□□ 2.17
GYPC-206ENST00000484700 SUPT6HQ7KZ85 1726 aaKnown RBP28.63■■■□□ 2.17
GYPC-206ENST00000484700 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
GYPC-206ENST00000484700 A2MP01023 1474 aa28.62■■■□□ 2.17
GYPC-206ENST00000484700 SETD1BQ9UPS6 1966 aaKnown RBP28.61■■■□□ 2.17
GYPC-206ENST00000484700 FBXO41Q8TF61 875 aa28.59■■■□□ 2.17
GYPC-206ENST00000484700 MBD5Q9P267 1494 aa28.59■■■□□ 2.17
GYPC-206ENST00000484700 C3P01024 1663 aa28.58■■■□□ 2.17
GYPC-206ENST00000484700 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
GYPC-206ENST00000484700 RTEL1-TNFRSF6BF6WH68 1400 aa28.56■■■□□ 2.16
GYPC-206ENST00000484700 DMRT2Q9Y5R5 561 aa28.55■■■□□ 2.16
GYPC-206ENST00000484700 PLXNC1O60486 1568 aa28.54■■■□□ 2.16
GYPC-206ENST00000484700 GGT6Q6P531 493 aa28.54■■■□□ 2.16
GYPC-206ENST00000484700 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
GYPC-206ENST00000484700 ADGBQ8N7X0 1667 aa28.52■■■□□ 2.16
GYPC-206ENST00000484700 PPP6R1Q9UPN7 881 aa28.52■■■□□ 2.16
GYPC-206ENST00000484700 CAMSAP2Q08AD1 1489 aa28.52■■■□□ 2.16
GYPC-206ENST00000484700 ZMYM3Q14202 1370 aa28.51■■■□□ 2.16
GYPC-206ENST00000484700 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
GYPC-206ENST00000484700 MROH2AA6NES4 1674 aa28.5■■■□□ 2.15
GYPC-206ENST00000484700 NPATQ14207 1427 aa28.49■■■□□ 2.15
GYPC-206ENST00000484700 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
GYPC-206ENST00000484700 TSPY4P0CV99 314 aa28.47■■■□□ 2.15
GYPC-206ENST00000484700 TSPY10P0CW01 314 aa28.47■■■□□ 2.15
GYPC-206ENST00000484700 DHX29Q7Z478 1369 aaKnown RBP28.47■■■□□ 2.15
GYPC-206ENST00000484700 APLP2Q06481 763 aa28.44■■■□□ 2.14
GYPC-206ENST00000484700 CLTCQ00610 1675 aaKnown RBP28.42■■■□□ 2.14
GYPC-206ENST00000484700 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
GYPC-206ENST00000484700 KIF3BO15066 747 aa28.4■■■□□ 2.14
GYPC-206ENST00000484700 CERKQ8TCT0 537 aa28.4■■■□□ 2.14
GYPC-206ENST00000484700 ARHGEF5Q12774 1597 aa28.4■■■□□ 2.14
GYPC-206ENST00000484700 STRCQ7RTU9 1775 aa28.38■■■□□ 2.13
GYPC-206ENST00000484700 PTPRTO14522 1441 aa28.35■■■□□ 2.13
GYPC-206ENST00000484700 PTPRKQ15262 1439 aa28.35■■■□□ 2.13
GYPC-206ENST00000484700 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
GYPC-206ENST00000484700 MIA2Q96PC5 1412 aa28.35■■■□□ 2.13
GYPC-206ENST00000484700 NCOA1Q15788 1441 aa28.32■■■□□ 2.12
GYPC-206ENST00000484700 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
GYPC-206ENST00000484700 FAM135AQ9P2D6 1515 aa28.28■■■□□ 2.12
GYPC-206ENST00000484700 CAMSAP1Q5T5Y3 1602 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms