RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 EFCAB2Q5VUJ9 269 aa46.11■■■■■ 4.97
HLA-C-207ENST00000484378 BCORL1Q5H9F3 1711 aa46.11■■■■■ 4.97
HLA-C-207ENST00000484378 POGZQ7Z3K3 1410 aa46.11■■■■■ 4.97
HLA-C-207ENST00000484378 ZFYVE16Q7Z3T8 1539 aa46.1■■■■■ 4.97
HLA-C-207ENST00000484378 FYCO1Q9BQS8 1478 aa46.1■■■■■ 4.97
HLA-C-207ENST00000484378 ARHGAP5Q13017 1502 aa46.07■■■■■ 4.97
HLA-C-207ENST00000484378 MAGI2Q86UL8 1455 aa46.06■■■■■ 4.96
HLA-C-207ENST00000484378 YEATS2Q9ULM3 1422 aa46.03■■■■■ 4.96
HLA-C-207ENST00000484378 PTPRMP28827 1452 aa46■■■■■ 4.95
HLA-C-207ENST00000484378 MADDQ8WXG6 1647 aa45.99■■■■■ 4.95
HLA-C-207ENST00000484378 PREX2Q70Z35 1606 aa45.92■■■■■ 4.94
HLA-C-207ENST00000484378 CDC42BPBQ9Y5S2 1711 aa45.91■■■■■ 4.94
HLA-C-207ENST00000484378 ZNF518AQ6AHZ1 1483 aa45.9■■■■■ 4.94
HLA-C-207ENST00000484378 SIGLEC1Q9BZZ2 1709 aa45.88■■■■■ 4.93
HLA-C-207ENST00000484378 RIMS1Q86UR5 1692 aaKnown RBP45.84■■■■■ 4.93
HLA-C-207ENST00000484378 KDM5CP41229 1560 aa45.81■■■■■ 4.92
HLA-C-207ENST00000484378 ATP10AO60312 1499 aa45.8■■■■■ 4.92
HLA-C-207ENST00000484378 CDC42BPAQ5VT25 1732 aa45.78■■■■■ 4.92
HLA-C-207ENST00000484378 C9orf84Q5VXU9 1444 aa45.77■■■■■ 4.92
HLA-C-207ENST00000484378 ABCC1P33527 1531 aa45.77■■■■■ 4.92
HLA-C-207ENST00000484378 AFAP1Q8N556 730 aa45.76■■■■■ 4.92
HLA-C-207ENST00000484378 CEP162Q5TB80 1403 aa45.73■■■■■ 4.91
HLA-C-207ENST00000484378 MLECQ14165 292 aa45.7■■■■■ 4.91
HLA-C-207ENST00000484378 ITSN2Q9NZM3 1697 aa45.69■■■■■ 4.91
HLA-C-207ENST00000484378 MYT1LQ9UL68 1186 aa45.69■■■■■ 4.9
HLA-C-207ENST00000484378 ARHGEF12Q9NZN5 1544 aa45.67■■■■■ 4.9
HLA-C-207ENST00000484378 FER1L4A9Z1Z3 1794 aa45.66■■■■■ 4.9
HLA-C-207ENST00000484378 TRAPPC8Q9Y2L5 1435 aa45.64■■■■■ 4.9
HLA-C-207ENST00000484378 DIP2CQ9Y2E4 1556 aa45.63■■■■■ 4.9
HLA-C-207ENST00000484378 MTUS2Q5JR59 1369 aa45.62■■■■■ 4.89
HLA-C-207ENST00000484378 MLH3Q9UHC1 1453 aa45.61■■■■■ 4.89
HLA-C-207ENST00000484378 GPATCH8Q9UKJ3 1502 aaKnown RBP45.61■■■■■ 4.89
HLA-C-207ENST00000484378 ABCA6Q8N139 1617 aa45.59■■■■■ 4.89
HLA-C-207ENST00000484378 PLPPR3Q6T4P5 718 aa45.57■■■■■ 4.89
HLA-C-207ENST00000484378 ZNF777Q9ULD5 760 aaPredicted RBP45.57■■■■■ 4.89
HLA-C-207ENST00000484378 SAMD9LQ8IVG5 1584 aa45.57■■■■■ 4.89
HLA-C-207ENST00000484378 REREQ9P2R6 1566 aa45.54■■■■■ 4.88
HLA-C-207ENST00000484378 LMTK3Q96Q04 1460 aa45.53■■■■■ 4.88
HLA-C-207ENST00000484378 CCNB3Q8WWL7 1395 aa45.52■■■■■ 4.88
HLA-C-207ENST00000484378 SYCP2Q9BX26 1530 aa45.51■■■■■ 4.88
HLA-C-207ENST00000484378 EHBP1L1Q8N3D4 1523 aa45.5■■■■■ 4.87
HLA-C-207ENST00000484378 KIDINS220Q9ULH0 1771 aa45.46■■■■■ 4.87
HLA-C-207ENST00000484378 CFDP1Q9UEE9 299 aaPredicted RBP45.45■■■■■ 4.87
HLA-C-207ENST00000484378 PLEKHH2Q8IVE3 1493 aa45.42■■■■■ 4.86
HLA-C-207ENST00000484378 TIAM1Q13009 1591 aa45.39■■■■■ 4.86
HLA-C-207ENST00000484378 AGLP35573 1532 aa45.37■■■■■ 4.85
HLA-C-207ENST00000484378 KIAA1107Q9UPP5 1409 aa45.37■■■■■ 4.85
HLA-C-207ENST00000484378 HNRNPMP52272 730 aaKnown RBP eCLIP45.37■■■■■ 4.85
HLA-C-207ENST00000484378 LOC105371045A0A1W2PR82 267 aa45.35■■■■■ 4.85
HLA-C-207ENST00000484378 SPAG9O60271 1321 aaKnown RBP45.33■■■■■ 4.85
HLA-C-207ENST00000484378 ILDR1Q86SU0 546 aaPredicted RBP45.28■■■■■ 4.84
HLA-C-207ENST00000484378 ATP7AQ04656 1500 aa45.27■■■■■ 4.84
HLA-C-207ENST00000484378 HSPA2P54652 639 aa45.26■■■■■ 4.84
HLA-C-207ENST00000484378 INO80Q9ULG1 1556 aaPredicted RBP45.25■■■■■ 4.83
HLA-C-207ENST00000484378 CEBPAP49715 358 aaPredicted RBP45.25■■■■■ 4.83
HLA-C-207ENST00000484378 VPS8Q8N3P4 1428 aa45.24■■■■■ 4.83
HLA-C-207ENST00000484378 SUPT6HQ7KZ85 1726 aaKnown RBP45.23■■■■■ 4.83
HLA-C-207ENST00000484378 PREX1Q8TCU6 1659 aa45.21■■■■■ 4.83
HLA-C-207ENST00000484378 ESF1Q9H501 851 aaKnown RBP45.2■■■■■ 4.83
HLA-C-207ENST00000484378 ZNF644Q9H582 1327 aaPredicted RBP45.19■■■■■ 4.82
HLA-C-207ENST00000484378 NCOA2Q15596 1464 aa45.18■■■■■ 4.82
HLA-C-207ENST00000484378 C3P01024 1663 aa45.14■■■■■ 4.82
HLA-C-207ENST00000484378 MBD5Q9P267 1494 aa45.1■■■■■ 4.81
HLA-C-207ENST00000484378 PLXNC1O60486 1568 aa45.1■■■■■ 4.81
HLA-C-207ENST00000484378 A2MP01023 1474 aa45.1■■■■■ 4.81
HLA-C-207ENST00000484378 CNTLNQ9NXG0 1405 aa45.09■■■■■ 4.81
HLA-C-207ENST00000484378 UHRF1BP1Q6BDS2 1440 aa45.06■■■■■ 4.8
HLA-C-207ENST00000484378 CAMSAP2Q08AD1 1489 aa45.04■■■■■ 4.8
HLA-C-207ENST00000484378 LRRC9Q6ZRR7 1453 aa45.04■■■■■ 4.8
HLA-C-207ENST00000484378 ADGBQ8N7X0 1667 aa45.03■■■■■ 4.8
HLA-C-207ENST00000484378 SETD1BQ9UPS6 1966 aaKnown RBP45.01■■■■■ 4.8
HLA-C-207ENST00000484378 MROH2AA6NES4 1674 aa44.98■■■■■ 4.79
HLA-C-207ENST00000484378 CCDC141Q6ZP82 1450 aa44.98■■■■■ 4.79
HLA-C-207ENST00000484378 RTEL1-TNFRSF6BF6WH68 1400 aa44.96■■■■■ 4.79
HLA-C-207ENST00000484378 MAP3K1Q13233 1512 aa44.94■■■■■ 4.78
HLA-C-207ENST00000484378 CLTCQ00610 1675 aaKnown RBP44.89■■■■■ 4.78
HLA-C-207ENST00000484378 GGT6Q6P531 493 aa44.87■■■■■ 4.77
HLA-C-207ENST00000484378 ZMYM3Q14202 1370 aa44.85■■■■■ 4.77
HLA-C-207ENST00000484378 RSPH4AQ5TD94 716 aa44.85■■■■■ 4.77
HLA-C-207ENST00000484378 ARHGEF5Q12774 1597 aa44.84■■■■■ 4.77
HLA-C-207ENST00000484378 KANK4Q5T7N3 995 aaPredicted RBP44.83■■■■■ 4.77
HLA-C-207ENST00000484378 NPATQ14207 1427 aa44.83■■■■■ 4.77
HLA-C-207ENST00000484378 FBXO41Q8TF61 875 aa44.81■■■■■ 4.76
HLA-C-207ENST00000484378 DHX29Q7Z478 1369 aaKnown RBP44.81■■■■■ 4.76
HLA-C-207ENST00000484378 STRCQ7RTU9 1775 aa44.79■■■■■ 4.76
HLA-C-207ENST00000484378 PPP6R1Q9UPN7 881 aa44.74■■■■■ 4.75
HLA-C-207ENST00000484378 MYOM3Q5VTT5 1437 aa44.72■■■■■ 4.75
HLA-C-207ENST00000484378 TSPY4P0CV99 314 aa44.71■■■■■ 4.75
HLA-C-207ENST00000484378 TSPY10P0CW01 314 aa44.71■■■■■ 4.75
HLA-C-207ENST00000484378 DMRT2Q9Y5R5 561 aa44.71■■■■■ 4.75
HLA-C-207ENST00000484378 MIA2Q96PC5 1412 aa44.68■■■■■ 4.74
HLA-C-207ENST00000484378 APLP2Q06481 763 aa44.67■■■■■ 4.74
HLA-C-207ENST00000484378 KIF3BO15066 747 aa44.66■■■■■ 4.74
HLA-C-207ENST00000484378 PTPRKQ15262 1439 aa44.66■■■■■ 4.74
HLA-C-207ENST00000484378 MYO3AQ8NEV4 1616 aa44.63■■■■■ 4.73
HLA-C-207ENST00000484378 MAST1Q9Y2H9 1570 aa44.61■■■■■ 4.73
HLA-C-207ENST00000484378 NCOA1Q15788 1441 aa44.59■■■■■ 4.73
HLA-C-207ENST00000484378 KDM5DQ9BY66 1539 aa44.58■■■■■ 4.73
HLA-C-207ENST00000484378 ZNF142P52746 1687 aaPredicted RBP44.58■■■■■ 4.73
HLA-C-207ENST00000484378 FAM135AQ9P2D6 1515 aa44.57■■■■■ 4.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms