RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 CD109Q6YHK3 1445 aa10.06□□□□□ -0.8
NCL-209ENST00000484328 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
NCL-209ENST00000484328 TEX14Q8IWB6 1497 aa10.05□□□□□ -0.8
NCL-209ENST00000484328 NEO1Q92859 1461 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 PHLDB1Q86UU1 1377 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 ABCC1P33527 1531 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 ARHGAP5Q13017 1502 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 FAM69CQ0P6D2 419 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 FANCAO15360 1455 aa10.04□□□□□ -0.8
NCL-209ENST00000484328 MSH5O43196 834 aa10.03□□□□□ -0.8
NCL-209ENST00000484328 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
NCL-209ENST00000484328 MIA2Q96PC5 1412 aa10.03□□□□□ -0.8
NCL-209ENST00000484328 PTPN23Q9H3S7 1636 aa10.03□□□□□ -0.8
NCL-209ENST00000484328 TCOF1Q13428 1488 aaKnown RBP10.03□□□□□ -0.8
NCL-209ENST00000484328 CCNB3Q8WWL7 1395 aa10.02□□□□□ -0.8
NCL-209ENST00000484328 RICTORQ6R327 1708 aa10.02□□□□□ -0.8
NCL-209ENST00000484328 FGD6Q6ZV73 1430 aa10.02□□□□□ -0.81
NCL-209ENST00000484328 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
NCL-209ENST00000484328 CAMSAP2Q08AD1 1489 aa10.01□□□□□ -0.81
NCL-209ENST00000484328 CROCC2H7BZ55 1655 aa10.01□□□□□ -0.81
NCL-209ENST00000484328 ARHGEF5Q12774 1597 aa10.01□□□□□ -0.81
NCL-209ENST00000484328 KDM5CP41229 1560 aa10□□□□□ -0.81
NCL-209ENST00000484328 RRBP1Q9P2E9 1410 aaKnown RBP9.99□□□□□ -0.81
NCL-209ENST00000484328 PLEKHH2Q8IVE3 1493 aa9.99□□□□□ -0.81
NCL-209ENST00000484328 SYCP2Q9BX26 1530 aa9.99□□□□□ -0.81
NCL-209ENST00000484328 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
NCL-209ENST00000484328 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
NCL-209ENST00000484328 ADGRL1O94910 1474 aa9.98□□□□□ -0.81
NCL-209ENST00000484328 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
NCL-209ENST00000484328 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
NCL-209ENST00000484328 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
NCL-209ENST00000484328 KDM6BO15054 1643 aa9.97□□□□□ -0.81
NCL-209ENST00000484328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.97□□□□□ -0.81
NCL-209ENST00000484328 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
NCL-209ENST00000484328 MBD5Q9P267 1494 aa9.97□□□□□ -0.81
NCL-209ENST00000484328 INO80Q9ULG1 1556 aaPredicted RBP9.97□□□□□ -0.81
NCL-209ENST00000484328 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
NCL-209ENST00000484328 MAST1Q9Y2H9 1570 aa9.96□□□□□ -0.82
NCL-209ENST00000484328 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
NCL-209ENST00000484328 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
NCL-209ENST00000484328 ZNF518AQ6AHZ1 1483 aa9.95□□□□□ -0.82
NCL-209ENST00000484328 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
NCL-209ENST00000484328 SHANK2Q9UPX8 1470 aa9.95□□□□□ -0.82
NCL-209ENST00000484328 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
NCL-209ENST00000484328 ADGBQ8N7X0 1667 aa9.94□□□□□ -0.82
NCL-209ENST00000484328 ZFYVE16Q7Z3T8 1539 aa9.94□□□□□ -0.82
NCL-209ENST00000484328 DENND4BO75064 1496 aaPredicted RBP9.94□□□□□ -0.82
NCL-209ENST00000484328 CCDC141Q6ZP82 1450 aa9.94□□□□□ -0.82
NCL-209ENST00000484328 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
NCL-209ENST00000484328 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
NCL-209ENST00000484328 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
NCL-209ENST00000484328 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
NCL-209ENST00000484328 ARHGEF40Q8TER5 1519 aa9.92□□□□□ -0.82
NCL-209ENST00000484328 TRAPPC8Q9Y2L5 1435 aa9.92□□□□□ -0.82
NCL-209ENST00000484328 ZNF644Q9H582 1327 aaPredicted RBP9.92□□□□□ -0.82
NCL-209ENST00000484328 DAPK1P53355 1430 aa9.91□□□□□ -0.82
NCL-209ENST00000484328 ABCA6Q8N139 1617 aa9.91□□□□□ -0.82
NCL-209ENST00000484328 ATP7AQ04656 1500 aa9.91□□□□□ -0.82
NCL-209ENST00000484328 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
NCL-209ENST00000484328 ABCC5O15440 1437 aa9.9□□□□□ -0.82
NCL-209ENST00000484328 ADGRL2O95490 1459 aa9.9□□□□□ -0.83
NCL-209ENST00000484328 MAGI2Q86UL8 1455 aa9.9□□□□□ -0.83
NCL-209ENST00000484328 REREQ9P2R6 1566 aa9.89□□□□□ -0.83
NCL-209ENST00000484328 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
NCL-209ENST00000484328 RTEL1-TNFRSF6BF6WH68 1400 aa9.89□□□□□ -0.83
NCL-209ENST00000484328 GCC2Q8IWJ2 1684 aa9.88□□□□□ -0.83
NCL-209ENST00000484328 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
NCL-209ENST00000484328 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
NCL-209ENST00000484328 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
NCL-209ENST00000484328 C9orf84Q5VXU9 1444 aa9.87□□□□□ -0.83
NCL-209ENST00000484328 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
NCL-209ENST00000484328 SIGLEC1Q9BZZ2 1709 aa9.86□□□□□ -0.83
NCL-209ENST00000484328 EIF2AK4Q9P2K8 1649 aaKnown RBP9.85□□□□□ -0.83
NCL-209ENST00000484328 HNRNPMP52272 730 aaKnown RBP eCLIP9.85□□□□□ -0.83
NCL-209ENST00000484328 YEATS2Q9ULM3 1422 aa9.84□□□□□ -0.83
NCL-209ENST00000484328 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
NCL-209ENST00000484328 ROCK1Q13464 1354 aa9.84□□□□□ -0.83
NCL-209ENST00000484328 FAM50AQ14320 339 aaKnown RBP9.83□□□□□ -0.84
NCL-209ENST00000484328 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
NCL-209ENST00000484328 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
NCL-209ENST00000484328 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
NCL-209ENST00000484328 DEPDC5O75140 1603 aa9.82□□□□□ -0.84
NCL-209ENST00000484328 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
NCL-209ENST00000484328 AGLP35573 1532 aa9.82□□□□□ -0.84
NCL-209ENST00000484328 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
NCL-209ENST00000484328 HFM1A2PYH4 1435 aa9.81□□□□□ -0.84
NCL-209ENST00000484328 ERBINQ96RT1 1412 aa9.81□□□□□ -0.84
NCL-209ENST00000484328 ATP10AO60312 1499 aa9.8□□□□□ -0.84
NCL-209ENST00000484328 A2MP01023 1474 aa9.8□□□□□ -0.84
NCL-209ENST00000484328 ANKRD30AQ9BXX3 1397 aa9.8□□□□□ -0.84
NCL-209ENST00000484328 MROH1Q8NDA8 1641 aa9.8□□□□□ -0.84
NCL-209ENST00000484328 UNC13BO14795 1591 aa9.8□□□□□ -0.84
NCL-209ENST00000484328 KIF15Q9NS87 1388 aa9.79□□□□□ -0.84
NCL-209ENST00000484328 PRDM15P57071 1507 aaPredicted RBP9.78□□□□□ -0.84
NCL-209ENST00000484328 TSPY4P0CV99 314 aa9.78□□□□□ -0.84
NCL-209ENST00000484328 TSPY10P0CW01 314 aa9.78□□□□□ -0.84
NCL-209ENST00000484328 NAIPQ13075 1403 aa9.78□□□□□ -0.84
NCL-209ENST00000484328 FAM135AQ9P2D6 1515 aa9.77□□□□□ -0.84
NCL-209ENST00000484328 ZC3H13Q5T200 1668 aaKnown RBP9.77□□□□□ -0.85
NCL-209ENST00000484328 DHX29Q7Z478 1369 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms