RNA–Protein interactions for RNA: ENST00000483859.6

SENP6-208, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-208ENST00000483859 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
SENP6-208ENST00000483859 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
SENP6-208ENST00000483859 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
SENP6-208ENST00000483859 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
SENP6-208ENST00000483859 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
SENP6-208ENST00000483859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
SENP6-208ENST00000483859 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
SENP6-208ENST00000483859 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
SENP6-208ENST00000483859 PTGER2P43116 358 aa10.71□□□□□ -0.69
SENP6-208ENST00000483859 NUDT7P0C024 238 aa10.69□□□□□ -0.7
SENP6-208ENST00000483859 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
SENP6-208ENST00000483859 SOX12O15370 315 aa10.68□□□□□ -0.7
SENP6-208ENST00000483859 LHX6Q9UPM6 363 aa10.64□□□□□ -0.71
SENP6-208ENST00000483859 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
SENP6-208ENST00000483859 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
SENP6-208ENST00000483859 FBXO22Q8NEZ5 403 aa10.59□□□□□ -0.71
SENP6-208ENST00000483859 KIF3CO14782 793 aa10.57□□□□□ -0.72
SENP6-208ENST00000483859 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
SENP6-208ENST00000483859 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
SENP6-208ENST00000483859 HCSTQ9UBK5 93 aa10.55□□□□□ -0.72
SENP6-208ENST00000483859 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
SENP6-208ENST00000483859 NLRP6P59044 892 aa10.53□□□□□ -0.72
SENP6-208ENST00000483859 ADGRD1Q6QNK2 874 aa10.53□□□□□ -0.72
SENP6-208ENST00000483859 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
SENP6-208ENST00000483859 PBX2P40425 430 aa10.52□□□□□ -0.73
SENP6-208ENST00000483859 MFRPQ9BY79 579 aa10.52□□□□□ -0.73
SENP6-208ENST00000483859 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
SENP6-208ENST00000483859 PSEN2P49810 448 aa10.5□□□□□ -0.73
SENP6-208ENST00000483859 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
SENP6-208ENST00000483859 KCTD12Q96CX2 325 aaKnown RBP10.47□□□□□ -0.73
SENP6-208ENST00000483859 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
SENP6-208ENST00000483859 HRO43593 1189 aa10.44□□□□□ -0.74
SENP6-208ENST00000483859 SLC34A2O95436 690 aa10.42□□□□□ -0.74
SENP6-208ENST00000483859 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
SENP6-208ENST00000483859 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
SENP6-208ENST00000483859 STK25O00506 426 aa10.38□□□□□ -0.75
SENP6-208ENST00000483859 PPP1R37O75864 691 aa10.38□□□□□ -0.75
SENP6-208ENST00000483859 PTPN5P54829 565 aa10.38□□□□□ -0.75
SENP6-208ENST00000483859 TK2O00142 265 aa10.34□□□□□ -0.75
SENP6-208ENST00000483859 KCNK17Q96T54 332 aa10.31□□□□□ -0.76
SENP6-208ENST00000483859 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
SENP6-208ENST00000483859 PTCD2Q8WV60 388 aaKnown RBP10.28□□□□□ -0.76
SENP6-208ENST00000483859 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
SENP6-208ENST00000483859 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
SENP6-208ENST00000483859 PPP4R3BQ5MIZ7 849 aa10.26□□□□□ -0.77
SENP6-208ENST00000483859 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
SENP6-208ENST00000483859 VPS9D1Q9Y2B5 631 aa10.25□□□□□ -0.77
SENP6-208ENST00000483859 RGL2O15211 777 aa10.21□□□□□ -0.77
SENP6-208ENST00000483859 DSG2Q14126 1118 aa10.21□□□□□ -0.77
SENP6-208ENST00000483859 ECM2O94769 699 aaPredicted RBP10.2□□□□□ -0.78
SENP6-208ENST00000483859 TAOK2Q9UL54 1235 aa10.2□□□□□ -0.78
SENP6-208ENST00000483859 A0A0G2JS52 829 aa10.19□□□□□ -0.78
SENP6-208ENST00000483859 FOXK1P85037 733 aa10.19□□□□□ -0.78
SENP6-208ENST00000483859 THSD4Q6ZMP0 1018 aa10.18□□□□□ -0.78
SENP6-208ENST00000483859 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
SENP6-208ENST00000483859 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
SENP6-208ENST00000483859 BHMG1C9JSJ3 638 aaPredicted RBP10.14□□□□□ -0.79
SENP6-208ENST00000483859 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
SENP6-208ENST00000483859 WNT2BQ93097 391 aa10.13□□□□□ -0.79
SENP6-208ENST00000483859 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
SENP6-208ENST00000483859 TBC1D12O60347 775 aa10.11□□□□□ -0.79
SENP6-208ENST00000483859 RGS20O76081 388 aa10.11□□□□□ -0.79
SENP6-208ENST00000483859 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
SENP6-208ENST00000483859 GOLGA8CPA6NN73 597 aa10.1□□□□□ -0.79
SENP6-208ENST00000483859 PKD2Q13563 968 aa10.09□□□□□ -0.79
SENP6-208ENST00000483859 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
SENP6-208ENST00000483859 Q6ZNB5 142 aa10.08□□□□□ -0.8
SENP6-208ENST00000483859 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
SENP6-208ENST00000483859 MRPL50Q8N5N7 158 aaKnown RBP10.07□□□□□ -0.8
SENP6-208ENST00000483859 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
SENP6-208ENST00000483859 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
SENP6-208ENST00000483859 PTPREP23469 700 aa10.04□□□□□ -0.8
SENP6-208ENST00000483859 FOSBP53539 338 aa10.04□□□□□ -0.8
SENP6-208ENST00000483859 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
SENP6-208ENST00000483859 LCE2BO14633 110 aa10.01□□□□□ -0.81
SENP6-208ENST00000483859 BCAMP50895 628 aa10□□□□□ -0.81
SENP6-208ENST00000483859 PROX2Q3B8N5 592 aa9.99□□□□□ -0.81
SENP6-208ENST00000483859 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
SENP6-208ENST00000483859 PPP1R15BQ5SWA1 713 aa9.94□□□□□ -0.82
SENP6-208ENST00000483859 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
SENP6-208ENST00000483859 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
SENP6-208ENST00000483859 EVI5O60447 810 aa9.93□□□□□ -0.82
SENP6-208ENST00000483859 COL9A1P20849 921 aa9.93□□□□□ -0.82
SENP6-208ENST00000483859 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
SENP6-208ENST00000483859 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
SENP6-208ENST00000483859 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
SENP6-208ENST00000483859 ANKK1Q8NFD2 765 aa9.9□□□□□ -0.82
SENP6-208ENST00000483859 WBP1LQ9NX94 342 aa9.9□□□□□ -0.82
SENP6-208ENST00000483859 NCKAP5LQ9HCH0 1330 aa9.89□□□□□ -0.83
SENP6-208ENST00000483859 NKX1-1Q15270 411 aaPredicted RBP9.88□□□□□ -0.83
SENP6-208ENST00000483859 SOWAHBA6NEL2 793 aa9.86□□□□□ -0.83
SENP6-208ENST00000483859 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
SENP6-208ENST00000483859 SEPT9Q9UHD8 586 aaPredicted RBP9.86□□□□□ -0.83
SENP6-208ENST00000483859 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
SENP6-208ENST00000483859 GFRA3O60609 400 aa9.85□□□□□ -0.83
SENP6-208ENST00000483859 PCDHGA10Q9Y5H3 936 aa9.85□□□□□ -0.83
SENP6-208ENST00000483859 PPP1R3GB7ZBB8 358 aa9.84□□□□□ -0.83
SENP6-208ENST00000483859 KCNC4Q03721 635 aa9.84□□□□□ -0.83
SENP6-208ENST00000483859 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
SENP6-208ENST00000483859 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms