RNA–Protein interactions for RNA: ENST00000483770.1

PABPC4-214, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-214ENST00000483770 PTPRMP28827 1452 aa14.8□□□□□ -0.04
PABPC4-214ENST00000483770 TROQ12816 1431 aaPredicted RBP14.79□□□□□ -0.04
PABPC4-214ENST00000483770 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
PABPC4-214ENST00000483770 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
PABPC4-214ENST00000483770 EFCAB2Q5VUJ9 269 aa14.78□□□□□ -0.04
PABPC4-214ENST00000483770 CDC42BPBQ9Y5S2 1711 aa14.78□□□□□ -0.04
PABPC4-214ENST00000483770 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
PABPC4-214ENST00000483770 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
PABPC4-214ENST00000483770 AFAP1Q8N556 730 aa14.76□□□□□ -0.05
PABPC4-214ENST00000483770 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
PABPC4-214ENST00000483770 MYT1LQ9UL68 1186 aa14.75□□□□□ -0.05
PABPC4-214ENST00000483770 ZMYM4Q5VZL5 1548 aa14.75□□□□□ -0.05
PABPC4-214ENST00000483770 CLIP1P30622 1438 aa14.75□□□□□ -0.05
PABPC4-214ENST00000483770 POGZQ7Z3K3 1410 aa14.75□□□□□ -0.05
PABPC4-214ENST00000483770 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
PABPC4-214ENST00000483770 CDC42BPAQ5VT25 1732 aa14.71□□□□□ -0.05
PABPC4-214ENST00000483770 ZNF777Q9ULD5 760 aaPredicted RBP14.7□□□□□ -0.06
PABPC4-214ENST00000483770 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 ARHGEF12Q9NZN5 1544 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 FER1L4A9Z1Z3 1794 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 ATP10AO60312 1499 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 MAGI2Q86UL8 1455 aa14.69□□□□□ -0.06
PABPC4-214ENST00000483770 HSPA2P54652 639 aa14.68□□□□□ -0.06
PABPC4-214ENST00000483770 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
PABPC4-214ENST00000483770 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
PABPC4-214ENST00000483770 CEBPAP49715 358 aaPredicted RBP14.67□□□□□ -0.06
PABPC4-214ENST00000483770 ZNF518AQ6AHZ1 1483 aa14.66□□□□□ -0.06
PABPC4-214ENST00000483770 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
PABPC4-214ENST00000483770 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
PABPC4-214ENST00000483770 C9orf84Q5VXU9 1444 aa14.65□□□□□ -0.06
PABPC4-214ENST00000483770 KDM5CP41229 1560 aa14.64□□□□□ -0.07
PABPC4-214ENST00000483770 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
PABPC4-214ENST00000483770 HNRNPMP52272 730 aaKnown RBP eCLIP14.64□□□□□ -0.07
PABPC4-214ENST00000483770 DIP2CQ9Y2E4 1556 aa14.64□□□□□ -0.07
PABPC4-214ENST00000483770 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
PABPC4-214ENST00000483770 ABCC1P33527 1531 aa14.63□□□□□ -0.07
PABPC4-214ENST00000483770 GPATCH8Q9UKJ3 1502 aaKnown RBP14.61□□□□□ -0.07
PABPC4-214ENST00000483770 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
PABPC4-214ENST00000483770 KIDINS220Q9ULH0 1771 aa14.61□□□□□ -0.07
PABPC4-214ENST00000483770 CEP162Q5TB80 1403 aa14.6□□□□□ -0.07
PABPC4-214ENST00000483770 SYCP2Q9BX26 1530 aa14.59□□□□□ -0.07
PABPC4-214ENST00000483770 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
PABPC4-214ENST00000483770 MLH3Q9UHC1 1453 aa14.58□□□□□ -0.08
PABPC4-214ENST00000483770 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.08
PABPC4-214ENST00000483770 ZNF644Q9H582 1327 aaPredicted RBP14.58□□□□□ -0.08
PABPC4-214ENST00000483770 CCNB3Q8WWL7 1395 aa14.58□□□□□ -0.08
PABPC4-214ENST00000483770 SUPT6HQ7KZ85 1726 aaKnown RBP14.56□□□□□ -0.08
PABPC4-214ENST00000483770 SPAG9O60271 1321 aaKnown RBP14.54□□□□□ -0.08
PABPC4-214ENST00000483770 C3P01024 1663 aa14.53□□□□□ -0.08
PABPC4-214ENST00000483770 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
PABPC4-214ENST00000483770 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.09
PABPC4-214ENST00000483770 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
PABPC4-214ENST00000483770 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
PABPC4-214ENST00000483770 SETD1BQ9UPS6 1966 aaKnown RBP14.51□□□□□ -0.09
PABPC4-214ENST00000483770 AGLP35573 1532 aa14.5□□□□□ -0.09
PABPC4-214ENST00000483770 EHBP1L1Q8N3D4 1523 aa14.5□□□□□ -0.09
PABPC4-214ENST00000483770 ATP7AQ04656 1500 aa14.49□□□□□ -0.09
PABPC4-214ENST00000483770 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
PABPC4-214ENST00000483770 GGT6Q6P531 493 aa14.47□□□□□ -0.09
PABPC4-214ENST00000483770 KIAA1107Q9UPP5 1409 aa14.47□□□□□ -0.09
PABPC4-214ENST00000483770 INO80Q9ULG1 1556 aaPredicted RBP14.47□□□□□ -0.09
PABPC4-214ENST00000483770 FBXO41Q8TF61 875 aa14.46□□□□□ -0.09
PABPC4-214ENST00000483770 CLTCQ00610 1675 aaKnown RBP14.46□□□□□ -0.1
PABPC4-214ENST00000483770 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
PABPC4-214ENST00000483770 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
PABPC4-214ENST00000483770 UHRF1BP1Q6BDS2 1440 aa14.45□□□□□ -0.1
PABPC4-214ENST00000483770 A2MP01023 1474 aa14.44□□□□□ -0.1
PABPC4-214ENST00000483770 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
PABPC4-214ENST00000483770 KANK4Q5T7N3 995 aaPredicted RBP14.44□□□□□ -0.1
PABPC4-214ENST00000483770 ZMYM3Q14202 1370 aa14.42□□□□□ -0.1
PABPC4-214ENST00000483770 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
PABPC4-214ENST00000483770 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
PABPC4-214ENST00000483770 PLXNC1O60486 1568 aa14.41□□□□□ -0.1
PABPC4-214ENST00000483770 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
PABPC4-214ENST00000483770 CERKQ8TCT0 537 aa14.4□□□□□ -0.1
PABPC4-214ENST00000483770 CNTLNQ9NXG0 1405 aa14.39□□□□□ -0.11
PABPC4-214ENST00000483770 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
PABPC4-214ENST00000483770 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
PABPC4-214ENST00000483770 KIF3BO15066 747 aa14.37□□□□□ -0.11
PABPC4-214ENST00000483770 CCDC141Q6ZP82 1450 aa14.36□□□□□ -0.11
PABPC4-214ENST00000483770 NCKAP5LQ9HCH0 1330 aa14.36□□□□□ -0.11
PABPC4-214ENST00000483770 DHX29Q7Z478 1369 aaKnown RBP14.35□□□□□ -0.11
PABPC4-214ENST00000483770 RTEL1-TNFRSF6BF6WH68 1400 aa14.35□□□□□ -0.11
PABPC4-214ENST00000483770 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
PABPC4-214ENST00000483770 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.11
PABPC4-214ENST00000483770 PTPRKQ15262 1439 aa14.33□□□□□ -0.11
PABPC4-214ENST00000483770 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
PABPC4-214ENST00000483770 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.12
PABPC4-214ENST00000483770 TSPY4P0CV99 314 aa14.32□□□□□ -0.12
PABPC4-214ENST00000483770 TSPY10P0CW01 314 aa14.32□□□□□ -0.12
PABPC4-214ENST00000483770 NPATQ14207 1427 aa14.32□□□□□ -0.12
PABPC4-214ENST00000483770 MYO3AQ8NEV4 1616 aa14.31□□□□□ -0.12
PABPC4-214ENST00000483770 NCOA1Q15788 1441 aa14.31□□□□□ -0.12
PABPC4-214ENST00000483770 RSPH4AQ5TD94 716 aa14.3□□□□□ -0.12
PABPC4-214ENST00000483770 ARHGEF5Q12774 1597 aa14.3□□□□□ -0.12
PABPC4-214ENST00000483770 PTPRTO14522 1441 aa14.28□□□□□ -0.12
PABPC4-214ENST00000483770 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
PABPC4-214ENST00000483770 WASHC2CQ9Y4E1 1318 aa14.28□□□□□ -0.12
PABPC4-214ENST00000483770 CEP170BQ9Y4F5 1589 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms