RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 NLRP6P59044 892 aa14.05□□□□□ -0.16
COMMD3-213ENST00000483684 RIMBP2O15034 1052 aa14.03□□□□□ -0.16
COMMD3-213ENST00000483684 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
COMMD3-213ENST00000483684 STK24Q9Y6E0 443 aa14.03□□□□□ -0.16
COMMD3-213ENST00000483684 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
COMMD3-213ENST00000483684 MFRPQ9BY79 579 aa14.01□□□□□ -0.17
COMMD3-213ENST00000483684 PKD2Q13563 968 aa14□□□□□ -0.17
COMMD3-213ENST00000483684 ERBB3P21860 1342 aa13.99□□□□□ -0.17
COMMD3-213ENST00000483684 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
COMMD3-213ENST00000483684 STK25O00506 426 aa13.97□□□□□ -0.17
COMMD3-213ENST00000483684 RGL2O15211 777 aa13.94□□□□□ -0.18
COMMD3-213ENST00000483684 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
COMMD3-213ENST00000483684 KIF3CO14782 793 aa13.9□□□□□ -0.18
COMMD3-213ENST00000483684 ZNF687Q8N1G0 1237 aa13.87□□□□□ -0.19
COMMD3-213ENST00000483684 ARSIQ5FYB1 569 aa13.86□□□□□ -0.19
COMMD3-213ENST00000483684 C2orf72A6NCS6 295 aa13.83□□□□□ -0.2
COMMD3-213ENST00000483684 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
COMMD3-213ENST00000483684 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
COMMD3-213ENST00000483684 PPP1R37O75864 691 aa13.76□□□□□ -0.21
COMMD3-213ENST00000483684 SLC34A2O95436 690 aa13.74□□□□□ -0.21
COMMD3-213ENST00000483684 RNF166Q96A37 237 aaPredicted RBP13.71□□□□□ -0.21
COMMD3-213ENST00000483684 TMC2Q8TDI7 906 aa13.69□□□□□ -0.22
COMMD3-213ENST00000483684 NUDT7P0C024 238 aa13.68□□□□□ -0.22
COMMD3-213ENST00000483684 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
COMMD3-213ENST00000483684 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
COMMD3-213ENST00000483684 HS6ST3Q8IZP7 471 aa13.66□□□□□ -0.22
COMMD3-213ENST00000483684 PTGER2P43116 358 aa13.64□□□□□ -0.23
COMMD3-213ENST00000483684 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
COMMD3-213ENST00000483684 POTEEQ6S8J3 1075 aa13.61□□□□□ -0.23
COMMD3-213ENST00000483684 LSM11P83369 360 aaKnown RBP eCLIP13.6□□□□□ -0.23
COMMD3-213ENST00000483684 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
COMMD3-213ENST00000483684 PBX2P40425 430 aa13.59□□□□□ -0.23
COMMD3-213ENST00000483684 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
COMMD3-213ENST00000483684 FOXK1P85037 733 aa13.57□□□□□ -0.24
COMMD3-213ENST00000483684 PTCD2Q8WV60 388 aaKnown RBP13.57□□□□□ -0.24
COMMD3-213ENST00000483684 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
COMMD3-213ENST00000483684 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-213ENST00000483684 PLPP6Q8IY26 295 aa13.52□□□□□ -0.25
COMMD3-213ENST00000483684 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
COMMD3-213ENST00000483684 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
COMMD3-213ENST00000483684 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-213ENST00000483684 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
COMMD3-213ENST00000483684 DSG2Q14126 1118 aa13.49□□□□□ -0.25
COMMD3-213ENST00000483684 ARHGAP33O14559 1287 aa13.45□□□□□ -0.26
COMMD3-213ENST00000483684 TBC1D12O60347 775 aa13.4□□□□□ -0.26
COMMD3-213ENST00000483684 ADGRD1Q6QNK2 874 aa13.4□□□□□ -0.26
COMMD3-213ENST00000483684 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
COMMD3-213ENST00000483684 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
COMMD3-213ENST00000483684 TK2O00142 265 aa13.36□□□□□ -0.27
COMMD3-213ENST00000483684 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
COMMD3-213ENST00000483684 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
COMMD3-213ENST00000483684 HRO43593 1189 aa13.35□□□□□ -0.27
COMMD3-213ENST00000483684 PSEN2P49810 448 aa13.35□□□□□ -0.27
COMMD3-213ENST00000483684 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
COMMD3-213ENST00000483684 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
COMMD3-213ENST00000483684 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
COMMD3-213ENST00000483684 GTPBP6O43824 516 aaPredicted RBP13.27□□□□□ -0.29
COMMD3-213ENST00000483684 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
COMMD3-213ENST00000483684 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
COMMD3-213ENST00000483684 PDE4AP27815 886 aa13.26□□□□□ -0.29
COMMD3-213ENST00000483684 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
COMMD3-213ENST00000483684 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
COMMD3-213ENST00000483684 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
COMMD3-213ENST00000483684 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
COMMD3-213ENST00000483684 FOSBP53539 338 aa13.19□□□□□ -0.3
COMMD3-213ENST00000483684 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
COMMD3-213ENST00000483684 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
COMMD3-213ENST00000483684 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
COMMD3-213ENST00000483684 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
COMMD3-213ENST00000483684 MFSD10Q14728 455 aa13.17□□□□□ -0.3
COMMD3-213ENST00000483684 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
COMMD3-213ENST00000483684 LARP6Q9BRS8 491 aaKnown RBP13.15□□□□□ -0.3
COMMD3-213ENST00000483684 EVI5O60447 810 aa13.14□□□□□ -0.31
COMMD3-213ENST00000483684 KCTD12Q96CX2 325 aaKnown RBP13.14□□□□□ -0.31
COMMD3-213ENST00000483684 JPH4Q96JJ6 628 aa13.14□□□□□ -0.31
COMMD3-213ENST00000483684 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-213ENST00000483684 PTPREP23469 700 aa13.11□□□□□ -0.31
COMMD3-213ENST00000483684 STAC3Q96MF2 364 aa13.11□□□□□ -0.31
COMMD3-213ENST00000483684 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
COMMD3-213ENST00000483684 EMILIN3Q9NT22 766 aa13.09□□□□□ -0.31
COMMD3-213ENST00000483684 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
COMMD3-213ENST00000483684 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
COMMD3-213ENST00000483684 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
COMMD3-213ENST00000483684 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
COMMD3-213ENST00000483684 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
COMMD3-213ENST00000483684 PCDHGA10Q9Y5H3 936 aa13□□□□□ -0.33
COMMD3-213ENST00000483684 PTPN5P54829 565 aa12.99□□□□□ -0.33
COMMD3-213ENST00000483684 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
COMMD3-213ENST00000483684 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
COMMD3-213ENST00000483684 PPP1R3GB7ZBB8 358 aa12.96□□□□□ -0.33
COMMD3-213ENST00000483684 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
COMMD3-213ENST00000483684 PHF14O94880 888 aa12.94□□□□□ -0.34
COMMD3-213ENST00000483684 WNT2BQ93097 391 aa12.94□□□□□ -0.34
COMMD3-213ENST00000483684 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
COMMD3-213ENST00000483684 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
COMMD3-213ENST00000483684 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
COMMD3-213ENST00000483684 COL9A1P20849 921 aa12.92□□□□□ -0.34
COMMD3-213ENST00000483684 TYW1BQ6NUM6 668 aa12.92□□□□□ -0.34
COMMD3-213ENST00000483684 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
COMMD3-213ENST00000483684 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms