RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 BCORL1Q5H9F3 1711 aa32.24■■■□□ 2.75
HPS4-213ENST00000483631 SCAPERQ9BY12 1400 aa32.24■■■□□ 2.75
HPS4-213ENST00000483631 POGZQ7Z3K3 1410 aa32.23■■■□□ 2.75
HPS4-213ENST00000483631 ZFYVE16Q7Z3T8 1539 aa32.21■■■□□ 2.75
HPS4-213ENST00000483631 HECW2Q9P2P5 1572 aa32.16■■■□□ 2.74
HPS4-213ENST00000483631 ARHGAP5Q13017 1502 aa32.16■■■□□ 2.74
HPS4-213ENST00000483631 ARID4BQ4LE39 1312 aaPredicted RBP32.15■■■□□ 2.74
HPS4-213ENST00000483631 PTPRMP28827 1452 aa32.14■■■□□ 2.74
HPS4-213ENST00000483631 CDC42BPBQ9Y5S2 1711 aa32.13■■■□□ 2.73
HPS4-213ENST00000483631 YEATS2Q9ULM3 1422 aa32.12■■■□□ 2.73
HPS4-213ENST00000483631 PREX2Q70Z35 1606 aa32.11■■■□□ 2.73
HPS4-213ENST00000483631 ZNF518AQ6AHZ1 1483 aa32.11■■■□□ 2.73
HPS4-213ENST00000483631 MADDQ8WXG6 1647 aa32.1■■■□□ 2.73
HPS4-213ENST00000483631 KDM5CP41229 1560 aa32.07■■■□□ 2.72
HPS4-213ENST00000483631 ILDR1Q86SU0 546 aaPredicted RBP32.06■■■□□ 2.72
HPS4-213ENST00000483631 ATP10AO60312 1499 aa32.03■■■□□ 2.72
HPS4-213ENST00000483631 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
HPS4-213ENST00000483631 SIGLEC1Q9BZZ2 1709 aa32.02■■■□□ 2.72
HPS4-213ENST00000483631 C9orf84Q5VXU9 1444 aa32■■■□□ 2.71
HPS4-213ENST00000483631 ABCC1P33527 1531 aa32■■■□□ 2.71
HPS4-213ENST00000483631 RIMS1Q86UR5 1692 aaKnown RBP31.98■■■□□ 2.71
HPS4-213ENST00000483631 CEP162Q5TB80 1403 aa31.96■■■□□ 2.71
HPS4-213ENST00000483631 MLH3Q9UHC1 1453 aa31.96■■■□□ 2.71
HPS4-213ENST00000483631 ITSN2Q9NZM3 1697 aa31.95■■■□□ 2.71
HPS4-213ENST00000483631 AFAP1Q8N556 730 aa31.95■■■□□ 2.71
HPS4-213ENST00000483631 REREQ9P2R6 1566 aa31.93■■■□□ 2.7
HPS4-213ENST00000483631 ARHGEF12Q9NZN5 1544 aa31.9■■■□□ 2.7
HPS4-213ENST00000483631 GPATCH8Q9UKJ3 1502 aaKnown RBP31.9■■■□□ 2.7
HPS4-213ENST00000483631 FER1L4A9Z1Z3 1794 aa31.9■■■□□ 2.7
HPS4-213ENST00000483631 DIP2CQ9Y2E4 1556 aa31.89■■■□□ 2.7
HPS4-213ENST00000483631 MTUS2Q5JR59 1369 aa31.88■■■□□ 2.69
HPS4-213ENST00000483631 TRAPPC8Q9Y2L5 1435 aa31.88■■■□□ 2.69
HPS4-213ENST00000483631 SAMD9LQ8IVG5 1584 aa31.84■■■□□ 2.69
HPS4-213ENST00000483631 ABCA6Q8N139 1617 aa31.83■■■□□ 2.69
HPS4-213ENST00000483631 EHBP1L1Q8N3D4 1523 aa31.83■■■□□ 2.69
HPS4-213ENST00000483631 PLEKHH2Q8IVE3 1493 aa31.82■■■□□ 2.68
HPS4-213ENST00000483631 CCNB3Q8WWL7 1395 aa31.81■■■□□ 2.68
HPS4-213ENST00000483631 MLECQ14165 292 aa31.81■■■□□ 2.68
HPS4-213ENST00000483631 MYT1LQ9UL68 1186 aa31.81■■■□□ 2.68
HPS4-213ENST00000483631 KIAA1107Q9UPP5 1409 aa31.81■■■□□ 2.68
HPS4-213ENST00000483631 AGLP35573 1532 aa31.8■■■□□ 2.68
HPS4-213ENST00000483631 KIDINS220Q9ULH0 1771 aa31.8■■■□□ 2.68
HPS4-213ENST00000483631 LMTK3Q96Q04 1460 aa31.79■■■□□ 2.68
HPS4-213ENST00000483631 SYCP2Q9BX26 1530 aa31.77■■■□□ 2.68
HPS4-213ENST00000483631 CFDP1Q9UEE9 299 aaPredicted RBP31.77■■■□□ 2.68
HPS4-213ENST00000483631 ZNF777Q9ULD5 760 aaPredicted RBP31.75■■■□□ 2.67
HPS4-213ENST00000483631 TIAM1Q13009 1591 aa31.73■■■□□ 2.67
HPS4-213ENST00000483631 SPAG9O60271 1321 aaKnown RBP31.67■■■□□ 2.66
HPS4-213ENST00000483631 VPS8Q8N3P4 1428 aa31.66■■■□□ 2.66
HPS4-213ENST00000483631 HNRNPMP52272 730 aaKnown RBP eCLIP31.66■■■□□ 2.66
HPS4-213ENST00000483631 INO80Q9ULG1 1556 aaPredicted RBP31.65■■■□□ 2.66
HPS4-213ENST00000483631 SETD1BQ9UPS6 1966 aaKnown RBP31.65■■■□□ 2.66
HPS4-213ENST00000483631 SUPT6HQ7KZ85 1726 aaKnown RBP31.65■■■□□ 2.66
HPS4-213ENST00000483631 ATP7AQ04656 1500 aa31.65■■■□□ 2.66
HPS4-213ENST00000483631 LOC105371045A0A1W2PR82 267 aa31.63■■■□□ 2.65
HPS4-213ENST00000483631 PREX1Q8TCU6 1659 aa31.62■■■□□ 2.65
HPS4-213ENST00000483631 PLPPR3Q6T4P5 718 aa31.6■■■□□ 2.65
HPS4-213ENST00000483631 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
HPS4-213ENST00000483631 CNTLNQ9NXG0 1405 aa31.58■■■□□ 2.65
HPS4-213ENST00000483631 MBD5Q9P267 1494 aa31.58■■■□□ 2.65
HPS4-213ENST00000483631 PLXNC1O60486 1568 aa31.56■■■□□ 2.64
HPS4-213ENST00000483631 MAP3K1Q13233 1512 aa31.56■■■□□ 2.64
HPS4-213ENST00000483631 ESF1Q9H501 851 aaKnown RBP31.55■■■□□ 2.64
HPS4-213ENST00000483631 C3P01024 1663 aa31.54■■■□□ 2.64
HPS4-213ENST00000483631 RTEL1-TNFRSF6BF6WH68 1400 aa31.53■■■□□ 2.64
HPS4-213ENST00000483631 CEBPAP49715 358 aaPredicted RBP31.53■■■□□ 2.64
HPS4-213ENST00000483631 ADGBQ8N7X0 1667 aa31.53■■■□□ 2.64
HPS4-213ENST00000483631 A2MP01023 1474 aa31.52■■■□□ 2.64
HPS4-213ENST00000483631 ZNF644Q9H582 1327 aaPredicted RBP31.52■■■□□ 2.64
HPS4-213ENST00000483631 LRRC9Q6ZRR7 1453 aa31.52■■■□□ 2.64
HPS4-213ENST00000483631 HSPA2P54652 639 aa31.51■■■□□ 2.63
HPS4-213ENST00000483631 MROH2AA6NES4 1674 aa31.51■■■□□ 2.63
HPS4-213ENST00000483631 RSPH4AQ5TD94 716 aa31.5■■■□□ 2.63
HPS4-213ENST00000483631 UHRF1BP1Q6BDS2 1440 aa31.48■■■□□ 2.63
HPS4-213ENST00000483631 CAMSAP2Q08AD1 1489 aa31.46■■■□□ 2.63
HPS4-213ENST00000483631 CCDC141Q6ZP82 1450 aa31.46■■■□□ 2.63
HPS4-213ENST00000483631 PPP6R1Q9UPN7 881 aa31.42■■■□□ 2.62
HPS4-213ENST00000483631 ARHGEF5Q12774 1597 aa31.41■■■□□ 2.62
HPS4-213ENST00000483631 NPATQ14207 1427 aa31.4■■■□□ 2.62
HPS4-213ENST00000483631 DHX29Q7Z478 1369 aaKnown RBP31.37■■■□□ 2.61
HPS4-213ENST00000483631 ZMYM3Q14202 1370 aa31.36■■■□□ 2.61
HPS4-213ENST00000483631 CLTCQ00610 1675 aaKnown RBP31.34■■■□□ 2.61
HPS4-213ENST00000483631 MIA2Q96PC5 1412 aa31.32■■■□□ 2.61
HPS4-213ENST00000483631 STRCQ7RTU9 1775 aa31.31■■■□□ 2.6
HPS4-213ENST00000483631 KANK4Q5T7N3 995 aaPredicted RBP31.31■■■□□ 2.6
HPS4-213ENST00000483631 DMRT2Q9Y5R5 561 aa31.31■■■□□ 2.6
HPS4-213ENST00000483631 GGT6Q6P531 493 aa31.3■■■□□ 2.6
HPS4-213ENST00000483631 FBXO41Q8TF61 875 aa31.3■■■□□ 2.6
HPS4-213ENST00000483631 FAM135AQ9P2D6 1515 aa31.29■■■□□ 2.6
HPS4-213ENST00000483631 MYOM3Q5VTT5 1437 aa31.29■■■□□ 2.6
HPS4-213ENST00000483631 TSPY4P0CV99 314 aa31.28■■■□□ 2.6
HPS4-213ENST00000483631 TSPY10P0CW01 314 aa31.28■■■□□ 2.6
HPS4-213ENST00000483631 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.6
HPS4-213ENST00000483631 APLP2Q06481 763 aa31.23■■■□□ 2.59
HPS4-213ENST00000483631 PTPRKQ15262 1439 aa31.23■■■□□ 2.59
HPS4-213ENST00000483631 ZNF142P52746 1687 aaPredicted RBP31.19■■■□□ 2.58
HPS4-213ENST00000483631 PTPRTO14522 1441 aa31.19■■■□□ 2.58
HPS4-213ENST00000483631 KIF3BO15066 747 aa31.19■■■□□ 2.58
HPS4-213ENST00000483631 MYO3AQ8NEV4 1616 aa31.16■■■□□ 2.58
HPS4-213ENST00000483631 NCOA1Q15788 1441 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms