RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
PTPN18-212ENST00000483617 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
PTPN18-212ENST00000483617 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
PTPN18-212ENST00000483617 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
PTPN18-212ENST00000483617 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
PTPN18-212ENST00000483617 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
PTPN18-212ENST00000483617 HECW2Q9P2P5 1572 aa17.84■□□□□ 0.45
PTPN18-212ENST00000483617 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
PTPN18-212ENST00000483617 YEATS2Q9ULM3 1422 aa17.83■□□□□ 0.45
PTPN18-212ENST00000483617 ARID4BQ4LE39 1312 aaPredicted RBP17.82■□□□□ 0.44
PTPN18-212ENST00000483617 PREX2Q70Z35 1606 aa17.82■□□□□ 0.44
PTPN18-212ENST00000483617 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
PTPN18-212ENST00000483617 PTPRMP28827 1452 aa17.82■□□□□ 0.44
PTPN18-212ENST00000483617 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
PTPN18-212ENST00000483617 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
PTPN18-212ENST00000483617 KDM5CP41229 1560 aa17.79■□□□□ 0.44
PTPN18-212ENST00000483617 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
PTPN18-212ENST00000483617 ABCC1P33527 1531 aa17.77■□□□□ 0.43
PTPN18-212ENST00000483617 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
PTPN18-212ENST00000483617 C9orf84Q5VXU9 1444 aa17.75■□□□□ 0.43
PTPN18-212ENST00000483617 RIMS1Q86UR5 1692 aaKnown RBP17.75■□□□□ 0.43
PTPN18-212ENST00000483617 ATP10AO60312 1499 aa17.74■□□□□ 0.43
PTPN18-212ENST00000483617 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
PTPN18-212ENST00000483617 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
PTPN18-212ENST00000483617 APLP2Q06481 763 aa17.73■□□□□ 0.43
PTPN18-212ENST00000483617 ARHGEF12Q9NZN5 1544 aa17.71■□□□□ 0.43
PTPN18-212ENST00000483617 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
PTPN18-212ENST00000483617 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
PTPN18-212ENST00000483617 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
PTPN18-212ENST00000483617 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
PTPN18-212ENST00000483617 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
PTPN18-212ENST00000483617 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
PTPN18-212ENST00000483617 MTUS2Q5JR59 1369 aa17.68■□□□□ 0.42
PTPN18-212ENST00000483617 SAMD9LQ8IVG5 1584 aa17.68■□□□□ 0.42
PTPN18-212ENST00000483617 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
PTPN18-212ENST00000483617 ABCA6Q8N139 1617 aa17.68■□□□□ 0.42
PTPN18-212ENST00000483617 EHBP1L1Q8N3D4 1523 aa17.67■□□□□ 0.42
PTPN18-212ENST00000483617 MLECQ14165 292 aa17.66■□□□□ 0.42
PTPN18-212ENST00000483617 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
PTPN18-212ENST00000483617 SYCP2Q9BX26 1530 aa17.66■□□□□ 0.42
PTPN18-212ENST00000483617 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.41
PTPN18-212ENST00000483617 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
PTPN18-212ENST00000483617 ZNF777Q9ULD5 760 aaPredicted RBP17.63■□□□□ 0.41
PTPN18-212ENST00000483617 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
PTPN18-212ENST00000483617 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
PTPN18-212ENST00000483617 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
PTPN18-212ENST00000483617 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
PTPN18-212ENST00000483617 KIAA1107Q9UPP5 1409 aa17.6■□□□□ 0.41
PTPN18-212ENST00000483617 AGLP35573 1532 aa17.6■□□□□ 0.41
PTPN18-212ENST00000483617 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
PTPN18-212ENST00000483617 INO80Q9ULG1 1556 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-212ENST00000483617 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
PTPN18-212ENST00000483617 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
PTPN18-212ENST00000483617 HNRNPMP52272 730 aaKnown RBP eCLIP17.55■□□□□ 0.42e-8■■■■■ 35.4
PTPN18-212ENST00000483617 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
PTPN18-212ENST00000483617 NCOA2Q15596 1464 aa17.53■□□□□ 0.4
PTPN18-212ENST00000483617 PREX1Q8TCU6 1659 aa17.52■□□□□ 0.39
PTPN18-212ENST00000483617 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
PTPN18-212ENST00000483617 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
PTPN18-212ENST00000483617 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
PTPN18-212ENST00000483617 CEBPAP49715 358 aaPredicted RBP17.49■□□□□ 0.39
PTPN18-212ENST00000483617 HSPA2P54652 639 aa17.49■□□□□ 0.39
PTPN18-212ENST00000483617 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
PTPN18-212ENST00000483617 C3P01024 1663 aa17.48■□□□□ 0.39
PTPN18-212ENST00000483617 MAP3K1Q13233 1512 aa17.48■□□□□ 0.39
PTPN18-212ENST00000483617 A2MP01023 1474 aa17.48■□□□□ 0.39
PTPN18-212ENST00000483617 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
PTPN18-212ENST00000483617 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
PTPN18-212ENST00000483617 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
PTPN18-212ENST00000483617 ADGBQ8N7X0 1667 aa17.46■□□□□ 0.39
PTPN18-212ENST00000483617 ILDR1Q86SU0 546 aaPredicted RBP17.46■□□□□ 0.39
PTPN18-212ENST00000483617 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
PTPN18-212ENST00000483617 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
PTPN18-212ENST00000483617 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
PTPN18-212ENST00000483617 MROH2AA6NES4 1674 aa17.44■□□□□ 0.38
PTPN18-212ENST00000483617 UHRF1BP1Q6BDS2 1440 aa17.44■□□□□ 0.38
PTPN18-212ENST00000483617 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
PTPN18-212ENST00000483617 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
PTPN18-212ENST00000483617 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
PTPN18-212ENST00000483617 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
PTPN18-212ENST00000483617 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
PTPN18-212ENST00000483617 RSPH4AQ5TD94 716 aa17.38■□□□□ 0.37
PTPN18-212ENST00000483617 DHX29Q7Z478 1369 aaKnown RBP17.37■□□□□ 0.37
PTPN18-212ENST00000483617 NPATQ14207 1427 aa17.37■□□□□ 0.37
PTPN18-212ENST00000483617 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
PTPN18-212ENST00000483617 MYOM3Q5VTT5 1437 aa17.36■□□□□ 0.37
PTPN18-212ENST00000483617 GGT6Q6P531 493 aa17.35■□□□□ 0.37
PTPN18-212ENST00000483617 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
PTPN18-212ENST00000483617 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
PTPN18-212ENST00000483617 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
PTPN18-212ENST00000483617 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
PTPN18-212ENST00000483617 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
PTPN18-212ENST00000483617 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
PTPN18-212ENST00000483617 MYO3AQ8NEV4 1616 aa17.31■□□□□ 0.36
PTPN18-212ENST00000483617 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
PTPN18-212ENST00000483617 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
PTPN18-212ENST00000483617 FBXO41Q8TF61 875 aa17.3■□□□□ 0.36
PTPN18-212ENST00000483617 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
PTPN18-212ENST00000483617 ZNF142P52746 1687 aaPredicted RBP17.29■□□□□ 0.36
PTPN18-212ENST00000483617 KIF3BO15066 747 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms