RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 CDK11AQ9UQ88 783 aaPredicted RBP14.28□□□□□ -0.12
POLR1A-207ENST00000483538 SUPT6HQ7KZ85 1726 aaKnown RBP14.27□□□□□ -0.12
POLR1A-207ENST00000483538 SAMD9LQ8IVG5 1584 aa14.27□□□□□ -0.12
POLR1A-207ENST00000483538 ABCC1P33527 1531 aa14.27□□□□□ -0.12
POLR1A-207ENST00000483538 AKNAQ7Z591 1439 aa14.27□□□□□ -0.12
POLR1A-207ENST00000483538 PHLDB1Q86UU1 1377 aa14.26□□□□□ -0.13
POLR1A-207ENST00000483538 SIGLEC1Q9BZZ2 1709 aa14.26□□□□□ -0.13
POLR1A-207ENST00000483538 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
POLR1A-207ENST00000483538 ARHGEF40Q8TER5 1519 aa14.25□□□□□ -0.13
POLR1A-207ENST00000483538 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
POLR1A-207ENST00000483538 LRRC9Q6ZRR7 1453 aa14.25□□□□□ -0.13
POLR1A-207ENST00000483538 KDM5CP41229 1560 aa14.24□□□□□ -0.13
POLR1A-207ENST00000483538 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
POLR1A-207ENST00000483538 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
POLR1A-207ENST00000483538 ARHGEF12Q9NZN5 1544 aa14.23□□□□□ -0.13
POLR1A-207ENST00000483538 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
POLR1A-207ENST00000483538 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
POLR1A-207ENST00000483538 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
POLR1A-207ENST00000483538 SYCP2Q9BX26 1530 aa14.2□□□□□ -0.14
POLR1A-207ENST00000483538 SCAPERQ9BY12 1400 aa14.19□□□□□ -0.14
POLR1A-207ENST00000483538 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
POLR1A-207ENST00000483538 ZFYVE16Q7Z3T8 1539 aa14.17□□□□□ -0.14
POLR1A-207ENST00000483538 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
POLR1A-207ENST00000483538 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
POLR1A-207ENST00000483538 YEATS2Q9ULM3 1422 aa14.16□□□□□ -0.14
POLR1A-207ENST00000483538 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
POLR1A-207ENST00000483538 ZNF518AQ6AHZ1 1483 aa14.16□□□□□ -0.14
POLR1A-207ENST00000483538 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
POLR1A-207ENST00000483538 INO80Q9ULG1 1556 aaPredicted RBP14.15□□□□□ -0.14
POLR1A-207ENST00000483538 DIP2CQ9Y2E4 1556 aa14.15□□□□□ -0.14
POLR1A-207ENST00000483538 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
POLR1A-207ENST00000483538 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
POLR1A-207ENST00000483538 MAGI2Q86UL8 1455 aa14.13□□□□□ -0.15
POLR1A-207ENST00000483538 BCORL1Q5H9F3 1711 aa14.12□□□□□ -0.15
POLR1A-207ENST00000483538 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
POLR1A-207ENST00000483538 ADAMTSL3P82987 1691 aa14.11□□□□□ -0.15
POLR1A-207ENST00000483538 MBD5Q9P267 1494 aa14.11□□□□□ -0.15
POLR1A-207ENST00000483538 REREQ9P2R6 1566 aa14.1□□□□□ -0.15
POLR1A-207ENST00000483538 KIAA1107Q9UPP5 1409 aa14.1□□□□□ -0.15
POLR1A-207ENST00000483538 PLEKHH2Q8IVE3 1493 aa14.1□□□□□ -0.15
POLR1A-207ENST00000483538 MLH3Q9UHC1 1453 aa14.1□□□□□ -0.15
POLR1A-207ENST00000483538 KDM4FA0A1W2PPD8 638 aa14.09□□□□□ -0.15
POLR1A-207ENST00000483538 ADGBQ8N7X0 1667 aa14.09□□□□□ -0.15
POLR1A-207ENST00000483538 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
POLR1A-207ENST00000483538 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
POLR1A-207ENST00000483538 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.15
POLR1A-207ENST00000483538 CROCC2H7BZ55 1655 aa14.08□□□□□ -0.16
POLR1A-207ENST00000483538 ATP7AQ04656 1500 aa14.08□□□□□ -0.16
POLR1A-207ENST00000483538 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
POLR1A-207ENST00000483538 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
POLR1A-207ENST00000483538 PLXNC1O60486 1568 aa14.07□□□□□ -0.16
POLR1A-207ENST00000483538 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
POLR1A-207ENST00000483538 PTPN23Q9H3S7 1636 aa14.06□□□□□ -0.16
POLR1A-207ENST00000483538 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
POLR1A-207ENST00000483538 C9orf84Q5VXU9 1444 aa14.05□□□□□ -0.16
POLR1A-207ENST00000483538 ATP10AO60312 1499 aa14.05□□□□□ -0.16
POLR1A-207ENST00000483538 MIA2Q96PC5 1412 aa14.04□□□□□ -0.16
POLR1A-207ENST00000483538 FER1L4A9Z1Z3 1794 aa14.04□□□□□ -0.16
POLR1A-207ENST00000483538 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR1A-207ENST00000483538 CCDC141Q6ZP82 1450 aa14.03□□□□□ -0.16
POLR1A-207ENST00000483538 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
POLR1A-207ENST00000483538 RIMS1Q86UR5 1692 aaKnown RBP14.02□□□□□ -0.16
POLR1A-207ENST00000483538 TCOF1Q13428 1488 aaKnown RBP14.02□□□□□ -0.16
POLR1A-207ENST00000483538 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
POLR1A-207ENST00000483538 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
POLR1A-207ENST00000483538 AGLP35573 1532 aa14□□□□□ -0.17
POLR1A-207ENST00000483538 APLP2Q06481 763 aa13.97□□□□□ -0.17
POLR1A-207ENST00000483538 RTEL1-TNFRSF6BF6WH68 1400 aa13.97□□□□□ -0.17
POLR1A-207ENST00000483538 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
POLR1A-207ENST00000483538 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
POLR1A-207ENST00000483538 A2MP01023 1474 aa13.94□□□□□ -0.18
POLR1A-207ENST00000483538 PTPRMP28827 1452 aa13.94□□□□□ -0.18
POLR1A-207ENST00000483538 ABCC5O15440 1437 aa13.94□□□□□ -0.18
POLR1A-207ENST00000483538 C3P01024 1663 aa13.92□□□□□ -0.18
POLR1A-207ENST00000483538 DAPK1P53355 1430 aa13.92□□□□□ -0.18
POLR1A-207ENST00000483538 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
POLR1A-207ENST00000483538 MROH1Q8NDA8 1641 aa13.91□□□□□ -0.18
POLR1A-207ENST00000483538 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
POLR1A-207ENST00000483538 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
POLR1A-207ENST00000483538 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
POLR1A-207ENST00000483538 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
POLR1A-207ENST00000483538 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
POLR1A-207ENST00000483538 DEPDC5O75140 1603 aa13.87□□□□□ -0.19
POLR1A-207ENST00000483538 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
POLR1A-207ENST00000483538 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
POLR1A-207ENST00000483538 MLECQ14165 292 aa13.86□□□□□ -0.19
POLR1A-207ENST00000483538 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
POLR1A-207ENST00000483538 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
POLR1A-207ENST00000483538 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
POLR1A-207ENST00000483538 DHX29Q7Z478 1369 aaKnown RBP13.85□□□□□ -0.19
POLR1A-207ENST00000483538 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
POLR1A-207ENST00000483538 CEP152O94986 1710 aa13.84□□□□□ -0.19
POLR1A-207ENST00000483538 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
POLR1A-207ENST00000483538 PREX1Q8TCU6 1659 aa13.83□□□□□ -0.2
POLR1A-207ENST00000483538 PRDM15P57071 1507 aaPredicted RBP13.83□□□□□ -0.2
POLR1A-207ENST00000483538 KDM5DQ9BY66 1539 aa13.82□□□□□ -0.2
POLR1A-207ENST00000483538 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
POLR1A-207ENST00000483538 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
POLR1A-207ENST00000483538 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
POLR1A-207ENST00000483538 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms