RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 CDC42BPAQ5VT25 1732 aa7.28□□□□□ -1.24
HDAC9-224ENST00000483142 U3KPZ7 1027 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-224ENST00000483142 NCOA2Q15596 1464 aa7.27□□□□□ -1.25
HDAC9-224ENST00000483142 CFAP74Q9C0B2 1584 aa7.27□□□□□ -1.25
HDAC9-224ENST00000483142 RANGAP1P46060 587 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-224ENST00000483142 CDC42BPBQ9Y5S2 1711 aa7.25□□□□□ -1.25
HDAC9-224ENST00000483142 TCOF1Q13428 1488 aaKnown RBP7.24□□□□□ -1.25
HDAC9-224ENST00000483142 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
HDAC9-224ENST00000483142 ABCC1P33527 1531 aa7.24□□□□□ -1.25
HDAC9-224ENST00000483142 CYB5RLQ6IPT4 315 aa7.24□□□□□ -1.25
HDAC9-224ENST00000483142 MYOM3Q5VTT5 1437 aa7.23□□□□□ -1.25
HDAC9-224ENST00000483142 MIA2Q96PC5 1412 aa7.23□□□□□ -1.25
HDAC9-224ENST00000483142 NEO1Q92859 1461 aa7.23□□□□□ -1.25
HDAC9-224ENST00000483142 CROCC2H7BZ55 1655 aa7.22□□□□□ -1.25
HDAC9-224ENST00000483142 GPATCH8Q9UKJ3 1502 aaKnown RBP7.22□□□□□ -1.25
HDAC9-224ENST00000483142 SAMD9LQ8IVG5 1584 aa7.22□□□□□ -1.25
HDAC9-224ENST00000483142 RRBP1Q9P2E9 1410 aaKnown RBP7.22□□□□□ -1.25
HDAC9-224ENST00000483142 DCAF8L1A6NGE4 600 aa7.22□□□□□ -1.25
HDAC9-224ENST00000483142 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
HDAC9-224ENST00000483142 ARHGEF5Q12774 1597 aa7.21□□□□□ -1.25
HDAC9-224ENST00000483142 PLCH2O75038 1416 aa7.21□□□□□ -1.25
HDAC9-224ENST00000483142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC9-224ENST00000483142 TEX14Q8IWB6 1497 aa7.21□□□□□ -1.26
HDAC9-224ENST00000483142 ZMYM4Q5VZL5 1548 aa7.21□□□□□ -1.26
HDAC9-224ENST00000483142 PHLDB1Q86UU1 1377 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 KDM5CP41229 1560 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 FRMPD1Q5SYB0 1578 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 PTPN23Q9H3S7 1636 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 FGD6Q6ZV73 1430 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 MAST1Q9Y2H9 1570 aa7.2□□□□□ -1.26
HDAC9-224ENST00000483142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.2□□□□□ -1.26
HDAC9-224ENST00000483142 DNMT1P26358 1616 aaKnown RBP7.19□□□□□ -1.26
HDAC9-224ENST00000483142 CAMSAP2Q08AD1 1489 aa7.19□□□□□ -1.26
HDAC9-224ENST00000483142 PLEKHH2Q8IVE3 1493 aa7.19□□□□□ -1.26
HDAC9-224ENST00000483142 SHANK2Q9UPX8 1470 aa7.19□□□□□ -1.26
HDAC9-224ENST00000483142 RICTORQ6R327 1708 aa7.19□□□□□ -1.26
HDAC9-224ENST00000483142 PLEKHD1A6NEE1 506 aa7.19□□□□□ -1.26
HDAC9-224ENST00000483142 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
HDAC9-224ENST00000483142 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-224ENST00000483142 INO80Q9ULG1 1556 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-224ENST00000483142 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
HDAC9-224ENST00000483142 KIAA1107Q9UPP5 1409 aa7.18□□□□□ -1.26
HDAC9-224ENST00000483142 FANCAO15360 1455 aa7.18□□□□□ -1.26
HDAC9-224ENST00000483142 ARHGAP5Q13017 1502 aa7.18□□□□□ -1.26
HDAC9-224ENST00000483142 CD109Q6YHK3 1445 aa7.18□□□□□ -1.26
HDAC9-224ENST00000483142 SYCP2Q9BX26 1530 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 PLXNC1O60486 1568 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 CCNB3Q8WWL7 1395 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 POGZQ7Z3K3 1410 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 MBD5Q9P267 1494 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 ZFYVE16Q7Z3T8 1539 aa7.17□□□□□ -1.26
HDAC9-224ENST00000483142 AKNAQ7Z591 1439 aa7.16□□□□□ -1.26
HDAC9-224ENST00000483142 ARHGEF40Q8TER5 1519 aa7.16□□□□□ -1.26
HDAC9-224ENST00000483142 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
HDAC9-224ENST00000483142 ARID3CA6NKF2 412 aa7.15□□□□□ -1.26
HDAC9-224ENST00000483142 APLP2Q06481 763 aa7.15□□□□□ -1.26
HDAC9-224ENST00000483142 ADGRL1O94910 1474 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 ADGRL2O95490 1459 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 CCDC141Q6ZP82 1450 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 ARHGEF12Q9NZN5 1544 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 HECW2Q9P2P5 1572 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 REREQ9P2R6 1566 aa7.15□□□□□ -1.27
HDAC9-224ENST00000483142 BCORL1Q5H9F3 1711 aa7.14□□□□□ -1.27
HDAC9-224ENST00000483142 ZNF518AQ6AHZ1 1483 aa7.14□□□□□ -1.27
HDAC9-224ENST00000483142 SAMD1Q6SPF0 538 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-224ENST00000483142 GCC2Q8IWJ2 1684 aa7.14□□□□□ -1.27
HDAC9-224ENST00000483142 TSPOAP1O95153 1857 aa7.13□□□□□ -1.27
HDAC9-224ENST00000483142 KDM6BO15054 1643 aa7.13□□□□□ -1.27
HDAC9-224ENST00000483142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-224ENST00000483142 HNRNPUL2Q1KMD3 747 aaKnown RBP7.13□□□□□ -1.27
HDAC9-224ENST00000483142 ATP7AQ04656 1500 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 MLH3Q9UHC1 1453 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 DAPK1P53355 1430 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 ATP1B4Q9UN42 357 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-224ENST00000483142 KIDINS220Q9ULH0 1771 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 ABCA6Q8N139 1617 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 DIP2CQ9Y2E4 1556 aa7.12□□□□□ -1.27
HDAC9-224ENST00000483142 DENND4BO75064 1496 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-224ENST00000483142 MAGI2Q86UL8 1455 aa7.11□□□□□ -1.27
HDAC9-224ENST00000483142 FKBP8Q14318 412 aa7.11□□□□□ -1.27
HDAC9-224ENST00000483142 EIF2AK4Q9P2K8 1649 aaKnown RBP7.11□□□□□ -1.27
HDAC9-224ENST00000483142 RTEL1-TNFRSF6BF6WH68 1400 aa7.1□□□□□ -1.27
HDAC9-224ENST00000483142 FAM69CQ0P6D2 419 aa7.1□□□□□ -1.27
HDAC9-224ENST00000483142 COL17A1Q9UMD9 1497 aaPredicted RBP7.1□□□□□ -1.27
HDAC9-224ENST00000483142 ABCC5O15440 1437 aa7.1□□□□□ -1.27
HDAC9-224ENST00000483142 TRAPPC8Q9Y2L5 1435 aa7.1□□□□□ -1.27
HDAC9-224ENST00000483142 EFCAB2Q5VUJ9 269 aa7.09□□□□□ -1.27
HDAC9-224ENST00000483142 FAM135AQ9P2D6 1515 aa7.09□□□□□ -1.27
HDAC9-224ENST00000483142 C9orf84Q5VXU9 1444 aa7.09□□□□□ -1.28
HDAC9-224ENST00000483142 SCAPERQ9BY12 1400 aa7.09□□□□□ -1.28
HDAC9-224ENST00000483142 DEPDC5O75140 1603 aa7.09□□□□□ -1.28
HDAC9-224ENST00000483142 ROCK1Q13464 1354 aa7.08□□□□□ -1.28
HDAC9-224ENST00000483142 AGLP35573 1532 aa7.08□□□□□ -1.28
HDAC9-224ENST00000483142 CFDP1Q9UEE9 299 aaPredicted RBP7.08□□□□□ -1.28
HDAC9-224ENST00000483142 PTPRKQ15262 1439 aa7.08□□□□□ -1.28
HDAC9-224ENST00000483142 RNF17Q9BXT8 1623 aaKnown RBP7.08□□□□□ -1.28
HDAC9-224ENST00000483142 POTEDQ86YR6 584 aa7.07□□□□□ -1.28
HDAC9-224ENST00000483142 KCNH8Q96L42 1107 aa7.07□□□□□ -1.28
HDAC9-224ENST00000483142 HFM1A2PYH4 1435 aa7.07□□□□□ -1.28
HDAC9-224ENST00000483142 UNC13BO14795 1591 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms