RNA–Protein interactions for RNA: ENST00000482962.5

ARF1-210, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-210ENST00000482962 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.37
ARF1-210ENST00000482962 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
ARF1-210ENST00000482962 EFCAB2Q5VUJ9 269 aa23.61■■□□□ 1.37
ARF1-210ENST00000482962 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
ARF1-210ENST00000482962 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
ARF1-210ENST00000482962 FRMPD1Q5SYB0 1578 aa23.6■■□□□ 1.37
ARF1-210ENST00000482962 RICTORQ6R327 1708 aa23.59■■□□□ 1.37
ARF1-210ENST00000482962 APLP2Q06481 763 aa23.58■■□□□ 1.37
ARF1-210ENST00000482962 CCNB3Q8WWL7 1395 aa23.57■■□□□ 1.36
ARF1-210ENST00000482962 GPATCH8Q9UKJ3 1502 aaKnown RBP23.56■■□□□ 1.36
ARF1-210ENST00000482962 NCOA2Q15596 1464 aa23.55■■□□□ 1.36
ARF1-210ENST00000482962 ABCC1P33527 1531 aa23.54■■□□□ 1.36
ARF1-210ENST00000482962 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
ARF1-210ENST00000482962 POGZQ7Z3K3 1410 aa23.54■■□□□ 1.36
ARF1-210ENST00000482962 SCAPERQ9BY12 1400 aa23.52■■□□□ 1.36
ARF1-210ENST00000482962 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
ARF1-210ENST00000482962 PLEKHH2Q8IVE3 1493 aa23.5■■□□□ 1.35
ARF1-210ENST00000482962 SAMD9LQ8IVG5 1584 aa23.5■■□□□ 1.35
ARF1-210ENST00000482962 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
ARF1-210ENST00000482962 RAPGEF3O95398 923 aa23.48■■□□□ 1.35
ARF1-210ENST00000482962 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
ARF1-210ENST00000482962 KDM5CP41229 1560 aa23.47■■□□□ 1.35
ARF1-210ENST00000482962 CFDP1Q9UEE9 299 aaPredicted RBP23.46■■□□□ 1.35
ARF1-210ENST00000482962 ZFYVE16Q7Z3T8 1539 aa23.44■■□□□ 1.34
ARF1-210ENST00000482962 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
ARF1-210ENST00000482962 HECW2Q9P2P5 1572 aa23.43■■□□□ 1.34
ARF1-210ENST00000482962 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
ARF1-210ENST00000482962 KANK4Q5T7N3 995 aaPredicted RBP23.41■■□□□ 1.34
ARF1-210ENST00000482962 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
ARF1-210ENST00000482962 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
ARF1-210ENST00000482962 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
ARF1-210ENST00000482962 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
ARF1-210ENST00000482962 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
ARF1-210ENST00000482962 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
ARF1-210ENST00000482962 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
ARF1-210ENST00000482962 YEATS2Q9ULM3 1422 aa23.32■■□□□ 1.32
ARF1-210ENST00000482962 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
ARF1-210ENST00000482962 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
ARF1-210ENST00000482962 ARHGEF5Q12774 1597 aa23.3■■□□□ 1.32
ARF1-210ENST00000482962 DIP2CQ9Y2E4 1556 aa23.3■■□□□ 1.32
ARF1-210ENST00000482962 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
ARF1-210ENST00000482962 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
ARF1-210ENST00000482962 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
ARF1-210ENST00000482962 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
ARF1-210ENST00000482962 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
ARF1-210ENST00000482962 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
ARF1-210ENST00000482962 ATP10AO60312 1499 aa23.28■■□□□ 1.32
ARF1-210ENST00000482962 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
ARF1-210ENST00000482962 HNRNPMP52272 730 aaKnown RBP eCLIP23.26■■□□□ 1.317e-7■■■■□ 22.9
ARF1-210ENST00000482962 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
ARF1-210ENST00000482962 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
ARF1-210ENST00000482962 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
ARF1-210ENST00000482962 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
ARF1-210ENST00000482962 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
ARF1-210ENST00000482962 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
ARF1-210ENST00000482962 BCORL1Q5H9F3 1711 aa23.23■■□□□ 1.31
ARF1-210ENST00000482962 ADGBQ8N7X0 1667 aa23.21■■□□□ 1.31
ARF1-210ENST00000482962 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
ARF1-210ENST00000482962 RTEL1-TNFRSF6BF6WH68 1400 aa23.2■■□□□ 1.3
ARF1-210ENST00000482962 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
ARF1-210ENST00000482962 ARID4BQ4LE39 1312 aaPredicted RBP23.19■■□□□ 1.3
ARF1-210ENST00000482962 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
ARF1-210ENST00000482962 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
ARF1-210ENST00000482962 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
ARF1-210ENST00000482962 AGLP35573 1532 aa23.17■■□□□ 1.3
ARF1-210ENST00000482962 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
ARF1-210ENST00000482962 PLXNC1O60486 1568 aa23.15■■□□□ 1.3
ARF1-210ENST00000482962 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
ARF1-210ENST00000482962 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
ARF1-210ENST00000482962 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
ARF1-210ENST00000482962 MADDQ8WXG6 1647 aa23.12■■□□□ 1.29
ARF1-210ENST00000482962 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
ARF1-210ENST00000482962 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
ARF1-210ENST00000482962 A2MP01023 1474 aa23.11■■□□□ 1.29
ARF1-210ENST00000482962 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
ARF1-210ENST00000482962 DAPK1P53355 1430 aa23.08■■□□□ 1.28
ARF1-210ENST00000482962 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
ARF1-210ENST00000482962 ABCC5O15440 1437 aa23.05■■□□□ 1.28
ARF1-210ENST00000482962 EIF2AK4Q9P2K8 1649 aaKnown RBP23.01■■□□□ 1.27
ARF1-210ENST00000482962 PTPRMP28827 1452 aa23.01■■□□□ 1.27
ARF1-210ENST00000482962 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
ARF1-210ENST00000482962 FAM50AQ14320 339 aaKnown RBP23■■□□□ 1.27
ARF1-210ENST00000482962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.277e-9■■□□□ 12.8
ARF1-210ENST00000482962 DUOX2Q9NRD8 1548 aa22.99■■□□□ 1.27
ARF1-210ENST00000482962 MLECQ14165 292 aa22.99■■□□□ 1.27
ARF1-210ENST00000482962 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
ARF1-210ENST00000482962 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
ARF1-210ENST00000482962 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
ARF1-210ENST00000482962 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
ARF1-210ENST00000482962 ADGRL2O95490 1459 aa22.96■■□□□ 1.27
ARF1-210ENST00000482962 MROH2AA6NES4 1674 aa22.95■■□□□ 1.26
ARF1-210ENST00000482962 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
ARF1-210ENST00000482962 KIF15Q9NS87 1388 aa22.94■■□□□ 1.26
ARF1-210ENST00000482962 RNF17Q9BXT8 1623 aaKnown RBP22.93■■□□□ 1.26
ARF1-210ENST00000482962 ERBINQ96RT1 1412 aa22.93■■□□□ 1.26
ARF1-210ENST00000482962 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
ARF1-210ENST00000482962 PPP6R1Q9UPN7 881 aa22.89■■□□□ 1.25
ARF1-210ENST00000482962 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
ARF1-210ENST00000482962 NCOA1Q15788 1441 aa22.89■■□□□ 1.25
ARF1-210ENST00000482962 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms