RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 NUP153P49790 1475 aaKnown RBP21.07■□□□□ 0.96
COL21A1-209ENST00000482933 EHMT2Q96KQ7 1210 aa21.06■□□□□ 0.96
COL21A1-209ENST00000482933 ATXN8OSP0DMR3 200 aa21.04■□□□□ 0.96
COL21A1-209ENST00000482933 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
COL21A1-209ENST00000482933 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
COL21A1-209ENST00000482933 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
COL21A1-209ENST00000482933 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
COL21A1-209ENST00000482933 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
COL21A1-209ENST00000482933 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.95
COL21A1-209ENST00000482933 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
COL21A1-209ENST00000482933 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
COL21A1-209ENST00000482933 ZBTB12Q9Y330 459 aaPredicted RBP20.93■□□□□ 0.94
COL21A1-209ENST00000482933 NEO1Q92859 1461 aa20.92■□□□□ 0.94
COL21A1-209ENST00000482933 ADGRL1O94910 1474 aa20.9■□□□□ 0.94
COL21A1-209ENST00000482933 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.94
COL21A1-209ENST00000482933 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
COL21A1-209ENST00000482933 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
COL21A1-209ENST00000482933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL21A1-209ENST00000482933 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
COL21A1-209ENST00000482933 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
COL21A1-209ENST00000482933 CFAP74Q9C0B2 1584 aa20.81■□□□□ 0.92
COL21A1-209ENST00000482933 FANCAO15360 1455 aa20.8■□□□□ 0.92
COL21A1-209ENST00000482933 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
COL21A1-209ENST00000482933 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
COL21A1-209ENST00000482933 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.91
COL21A1-209ENST00000482933 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
COL21A1-209ENST00000482933 PLCH2O75038 1416 aa20.74■□□□□ 0.91
COL21A1-209ENST00000482933 CLIP1P30622 1438 aa20.73■□□□□ 0.91
COL21A1-209ENST00000482933 TROQ12816 1431 aaPredicted RBP20.73■□□□□ 0.91
COL21A1-209ENST00000482933 CASKIN1Q8WXD9 1431 aa20.73■□□□□ 0.91
COL21A1-209ENST00000482933 CCDC18Q5T9S5 1454 aa20.71■□□□□ 0.91
COL21A1-209ENST00000482933 KIF14Q15058 1648 aa20.71■□□□□ 0.91
COL21A1-209ENST00000482933 RICTORQ6R327 1708 aa20.71■□□□□ 0.91
COL21A1-209ENST00000482933 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
COL21A1-209ENST00000482933 PCF11O94913 1555 aaKnown RBP20.69■□□□□ 0.9
COL21A1-209ENST00000482933 MYO5CQ9NQX4 1742 aa20.69■□□□□ 0.9
COL21A1-209ENST00000482933 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
COL21A1-209ENST00000482933 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
COL21A1-209ENST00000482933 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
COL21A1-209ENST00000482933 ZMYM4Q5VZL5 1548 aa20.65■□□□□ 0.9
COL21A1-209ENST00000482933 ARHGEF40Q8TER5 1519 aa20.65■□□□□ 0.9
COL21A1-209ENST00000482933 ARID4BQ4LE39 1312 aaPredicted RBP20.65■□□□□ 0.9
COL21A1-209ENST00000482933 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
COL21A1-209ENST00000482933 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
COL21A1-209ENST00000482933 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
COL21A1-209ENST00000482933 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
COL21A1-209ENST00000482933 ZFYVE16Q7Z3T8 1539 aa20.6■□□□□ 0.89
COL21A1-209ENST00000482933 BCORL1Q5H9F3 1711 aa20.59■□□□□ 0.89
COL21A1-209ENST00000482933 YEATS2Q9ULM3 1422 aa20.57■□□□□ 0.88
COL21A1-209ENST00000482933 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
COL21A1-209ENST00000482933 PTPRMP28827 1452 aa20.55■□□□□ 0.88
COL21A1-209ENST00000482933 ZNF518AQ6AHZ1 1483 aa20.55■□□□□ 0.88
COL21A1-209ENST00000482933 POTEHQ6S545 545 aa20.53■□□□□ 0.88
COL21A1-209ENST00000482933 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
COL21A1-209ENST00000482933 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
COL21A1-209ENST00000482933 CEP162Q5TB80 1403 aa20.52■□□□□ 0.88
COL21A1-209ENST00000482933 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
COL21A1-209ENST00000482933 ATP10AO60312 1499 aa20.5■□□□□ 0.87
COL21A1-209ENST00000482933 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
COL21A1-209ENST00000482933 KDM5CP41229 1560 aa20.49■□□□□ 0.87
COL21A1-209ENST00000482933 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
COL21A1-209ENST00000482933 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
COL21A1-209ENST00000482933 CDC42BPAQ5VT25 1732 aa20.48■□□□□ 0.87
COL21A1-209ENST00000482933 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
COL21A1-209ENST00000482933 ABCC1P33527 1531 aa20.47■□□□□ 0.87
COL21A1-209ENST00000482933 AKT1S1Q96B36 256 aa20.46■□□□□ 0.87
COL21A1-209ENST00000482933 SIGLEC1Q9BZZ2 1709 aa20.45■□□□□ 0.87
COL21A1-209ENST00000482933 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
COL21A1-209ENST00000482933 MLECQ14165 292 aa20.44■□□□□ 0.86
COL21A1-209ENST00000482933 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
COL21A1-209ENST00000482933 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
COL21A1-209ENST00000482933 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
COL21A1-209ENST00000482933 ZNF777Q9ULD5 760 aaPredicted RBP20.43■□□□□ 0.86
COL21A1-209ENST00000482933 TRAPPC8Q9Y2L5 1435 aa20.42■□□□□ 0.86
COL21A1-209ENST00000482933 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
COL21A1-209ENST00000482933 CCNB3Q8WWL7 1395 aa20.42■□□□□ 0.86
COL21A1-209ENST00000482933 CFDP1Q9UEE9 299 aaPredicted RBP20.4■□□□□ 0.86
COL21A1-209ENST00000482933 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
COL21A1-209ENST00000482933 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
COL21A1-209ENST00000482933 DIP2CQ9Y2E4 1556 aa20.39■□□□□ 0.85
COL21A1-209ENST00000482933 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
COL21A1-209ENST00000482933 SAMD9LQ8IVG5 1584 aa20.38■□□□□ 0.85
COL21A1-209ENST00000482933 REREQ9P2R6 1566 aa20.38■□□□□ 0.85
COL21A1-209ENST00000482933 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
COL21A1-209ENST00000482933 ABCA6Q8N139 1617 aa20.36■□□□□ 0.85
COL21A1-209ENST00000482933 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
COL21A1-209ENST00000482933 SYCP2Q9BX26 1530 aa20.35■□□□□ 0.85
COL21A1-209ENST00000482933 HNRNPMP52272 730 aaKnown RBP eCLIP20.34■□□□□ 0.85
COL21A1-209ENST00000482933 KIDINS220Q9ULH0 1771 aa20.34■□□□□ 0.85
COL21A1-209ENST00000482933 SPAG9O60271 1321 aaKnown RBP20.32■□□□□ 0.84
COL21A1-209ENST00000482933 AGLP35573 1532 aa20.32■□□□□ 0.84
COL21A1-209ENST00000482933 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
COL21A1-209ENST00000482933 LMTK3Q96Q04 1460 aa20.31■□□□□ 0.84
COL21A1-209ENST00000482933 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
COL21A1-209ENST00000482933 CHRDL2Q6WN34 429 aa20.28■□□□□ 0.84
COL21A1-209ENST00000482933 SUPT6HQ7KZ85 1726 aaKnown RBP20.28■□□□□ 0.84
COL21A1-209ENST00000482933 ESF1Q9H501 851 aaKnown RBP20.27■□□□□ 0.84
COL21A1-209ENST00000482933 ATP7AQ04656 1500 aa20.26■□□□□ 0.83
COL21A1-209ENST00000482933 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
COL21A1-209ENST00000482933 ZNF644Q9H582 1327 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms