RNA–Protein interactions for RNA: ENST00000482646.5

CREM-233, Transcript of cAMP responsive element modulator, human

TSL 3

Gene CREM, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-233	ENST00000482646	CFAP74	Q9C0B2	1584 aa		34.2	■■■■□ 3.07
CREM-233	ENST00000482646	FANCA	O15360	1455 aa		34.19	■■■■□ 3.06
CREM-233	ENST00000482646	FRMPD1	Q5SYB0	1578 aa		34.19	■■■■□ 3.06
CREM-233	ENST00000482646	MYO5C	Q9NQX4	1742 aa		34.18	■■■■□ 3.06
CREM-233	ENST00000482646	ITSN2	Q9NZM3	1697 aa		34.18	■■■■□ 3.06
CREM-233	ENST00000482646	DENND4B	O75064	1496 aa	Predicted RBP	34.17	■■■■□ 3.06
CREM-233	ENST00000482646	AKNA	Q7Z591	1439 aa		34.17	■■■■□ 3.06
CREM-233	ENST00000482646	PPARGC1B	Q86YN6	1023 aa	Known RBP	34.16	■■■■□ 3.06
CREM-233	ENST00000482646	CDC42BPA	Q5VT25	1732 aa		34.15	■■■■□ 3.06
CREM-233	ENST00000482646	PREX2	Q70Z35	1606 aa		34.12	■■■■□ 3.05
CREM-233	ENST00000482646	ARID4B	Q4LE39	1312 aa	Predicted RBP	34.11	■■■■□ 3.05
CREM-233	ENST00000482646	CCNB3	Q8WWL7	1395 aa		34.09	■■■■□ 3.05
CREM-233	ENST00000482646	ADAMTSL3	P82987	1691 aa		34.08	■■■■□ 3.05
CREM-233	ENST00000482646	RICTOR	Q6R327	1708 aa		34.07	■■■■□ 3.05
CREM-233	ENST00000482646	ARHGEF40	Q8TER5	1519 aa		34.06	■■■■□ 3.04
CREM-233	ENST00000482646	CDC42BPB	Q9Y5S2	1711 aa		34.04	■■■■□ 3.04
CREM-233	ENST00000482646	PLCH2	O75038	1416 aa		34.03	■■■■□ 3.04
CREM-233	ENST00000482646	MYOM3	Q5VTT5	1437 aa		34.03	■■■■□ 3.04
CREM-233	ENST00000482646	PTPRM	P28827	1452 aa		34.02	■■■■□ 3.04
CREM-233	ENST00000482646	BCORL1	Q5H9F3	1711 aa		34.02	■■■■□ 3.04
CREM-233	ENST00000482646	GPATCH8	Q9UKJ3	1502 aa	Known RBP	34.02	■■■■□ 3.04
CREM-233	ENST00000482646	ZMYM4	Q5VZL5	1548 aa		33.99	■■■■□ 3.03
CREM-233	ENST00000482646	ARHGAP5	Q13017	1502 aa		33.98	■■■■□ 3.03
CREM-233	ENST00000482646	MAGI2	Q86UL8	1455 aa		33.95	■■■■□ 3.02
CREM-233	ENST00000482646	ZFYVE16	Q7Z3T8	1539 aa		33.94	■■■■□ 3.02
CREM-233	ENST00000482646	SCAPER	Q9BY12	1400 aa		33.94	■■■■□ 3.02
CREM-233	ENST00000482646	EFCAB2	Q5VUJ9	269 aa		33.93	■■■■□ 3.02
CREM-233	ENST00000482646	MIA2	Q96PC5	1412 aa		33.93	■■■■□ 3.02
CREM-233	ENST00000482646	MADD	Q8WXG6	1647 aa		33.93	■■■■□ 3.02
CREM-233	ENST00000482646	POGZ	Q7Z3K3	1410 aa		33.92	■■■■□ 3.02
CREM-233	ENST00000482646	FGD6	Q6ZV73	1430 aa		33.91	■■■■□ 3.02
CREM-233	ENST00000482646	PTPN23	Q9H3S7	1636 aa		33.89	■■■■□ 3.02
CREM-233	ENST00000482646	ILDR1	Q86SU0	546 aa	Predicted RBP	33.88	■■■■□ 3.01
CREM-233	ENST00000482646	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.88	■■■■□ 3.01
CREM-233	ENST00000482646	YEATS2	Q9ULM3	1422 aa		33.87	■■■■□ 3.01
CREM-233	ENST00000482646	SAMD9L	Q8IVG5	1584 aa		33.85	■■■■□ 3.01
CREM-233	ENST00000482646	CAMSAP2	Q08AD1	1489 aa		33.82	■■■■□ 3
CREM-233	ENST00000482646	RIMS1	Q86UR5	1692 aa	Known RBP	33.81	■■■■□ 3
CREM-233	ENST00000482646	RRBP1	Q9P2E9	1410 aa	Known RBP	33.81	■■■■□ 3
CREM-233	ENST00000482646	TCOF1	Q13428	1488 aa	Known RBP	33.81	■■■■□ 3
CREM-233	ENST00000482646	PLEKHH2	Q8IVE3	1493 aa		33.78	■■■■□ 3
CREM-233	ENST00000482646	ABCC1	P33527	1531 aa		33.78	■■■■□ 3
CREM-233	ENST00000482646	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.76	■■■□□ 2.99
CREM-233	ENST00000482646	ZNF518A	Q6AHZ1	1483 aa		33.76	■■■□□ 2.99
CREM-233	ENST00000482646	ATP10A	O60312	1499 aa		33.75	■■■□□ 2.99
CREM-233	ENST00000482646	MLEC	Q14165	292 aa		33.73	■■■□□ 2.99
CREM-233	ENST00000482646	SIGLEC1	Q9BZZ2	1709 aa		33.73	■■■□□ 2.99
CREM-233	ENST00000482646	C9orf84	Q5VXU9	1444 aa		33.72	■■■□□ 2.99
CREM-233	ENST00000482646	SYCP2	Q9BX26	1530 aa		33.72	■■■□□ 2.99
CREM-233	ENST00000482646	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.69	■■■□□ 2.98
CREM-233	ENST00000482646	KIAA1107	Q9UPP5	1409 aa		33.69	■■■□□ 2.98
CREM-233	ENST00000482646	PLPPR3	Q6T4P5	718 aa		33.68	■■■□□ 2.98
CREM-233	ENST00000482646	ZNF644	Q9H582	1327 aa	Predicted RBP	33.68	■■■□□ 2.98
CREM-233	ENST00000482646	LMTK3	Q96Q04	1460 aa		33.68	■■■□□ 2.98
CREM-233	ENST00000482646	MYT1L	Q9UL68	1186 aa		33.67	■■■□□ 2.98
CREM-233	ENST00000482646	ARHGEF5	Q12774	1597 aa		33.67	■■■□□ 2.98
CREM-233	ENST00000482646	FAM50A	Q14320	339 aa	Known RBP	33.66	■■■□□ 2.98
CREM-233	ENST00000482646	AFAP1	Q8N556	730 aa		33.66	■■■□□ 2.98
CREM-233	ENST00000482646	DNMT1	P26358	1616 aa	Known RBP	33.65	■■■□□ 2.98
CREM-233	ENST00000482646	KDM5C	P41229	1560 aa		33.65	■■■□□ 2.98
CREM-233	ENST00000482646	FER1L4	A9Z1Z3	1794 aa		33.65	■■■□□ 2.98
CREM-233	ENST00000482646	CROCC2	H7BZ55	1655 aa		33.64	■■■□□ 2.98
CREM-233	ENST00000482646	ARHGEF12	Q9NZN5	1544 aa		33.62	■■■□□ 2.97
CREM-233	ENST00000482646	MBD5	Q9P267	1494 aa		33.59	■■■□□ 2.97
CREM-233	ENST00000482646	CCDC141	Q6ZP82	1450 aa		33.58	■■■□□ 2.97
CREM-233	ENST00000482646	DAPK1	P53355	1430 aa		33.54	■■■□□ 2.96
CREM-233	ENST00000482646	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.54	■■■□□ 2.96	2e-6	■■■■□ 19.8
CREM-233	ENST00000482646	MLH3	Q9UHC1	1453 aa		33.54	■■■□□ 2.96
CREM-233	ENST00000482646	RSPH4A	Q5TD94	716 aa		33.53	■■■□□ 2.96
CREM-233	ENST00000482646	TRAPPC8	Q9Y2L5	1435 aa		33.53	■■■□□ 2.96
CREM-233	ENST00000482646	DIP2C	Q9Y2E4	1556 aa		33.52	■■■□□ 2.96
CREM-233	ENST00000482646	SHANK2	Q9UPX8	1470 aa		33.5	■■■□□ 2.95
CREM-233	ENST00000482646	HSPA2	P54652	639 aa		33.5	■■■□□ 2.95
CREM-233	ENST00000482646	ABCC5	O15440	1437 aa		33.5	■■■□□ 2.95
CREM-233	ENST00000482646	RERE	Q9P2R6	1566 aa		33.5	■■■□□ 2.95
CREM-233	ENST00000482646	ADGB	Q8N7X0	1667 aa		33.49	■■■□□ 2.95
CREM-233	ENST00000482646	TRIM26	Q12899	539 aa	Predicted RBP	33.49	■■■□□ 2.95
CREM-233	ENST00000482646	MAST1	Q9Y2H9	1570 aa		33.48	■■■□□ 2.95
CREM-233	ENST00000482646	ABCA6	Q8N139	1617 aa		33.46	■■■□□ 2.95
CREM-233	ENST00000482646	INO80	Q9ULG1	1556 aa	Predicted RBP	33.44	■■■□□ 2.94
CREM-233	ENST00000482646	FBXO41	Q8TF61	875 aa		33.44	■■■□□ 2.94
CREM-233	ENST00000482646	AGL	P35573	1532 aa		33.4	■■■□□ 2.94
CREM-233	ENST00000482646	ITGAE	P38570	1179 aa		33.4	■■■□□ 2.94
CREM-233	ENST00000482646	CEBPA	P49715	358 aa	Predicted RBP	33.4	■■■□□ 2.94
CREM-233	ENST00000482646	ATP7A	Q04656	1500 aa		33.39	■■■□□ 2.94
CREM-233	ENST00000482646	TSPY4	P0CV99	314 aa		33.39	■■■□□ 2.94
CREM-233	ENST00000482646	TSPY10	P0CW01	314 aa		33.39	■■■□□ 2.94
CREM-233	ENST00000482646	ESF1	Q9H501	851 aa	Known RBP	33.39	■■■□□ 2.94
CREM-233	ENST00000482646	PREX1	Q8TCU6	1659 aa		33.38	■■■□□ 2.93
CREM-233	ENST00000482646	KIDINS220	Q9ULH0	1771 aa		33.37	■■■□□ 2.93
CREM-233	ENST00000482646	PTPRK	Q15262	1439 aa		33.36	■■■□□ 2.93
CREM-233	ENST00000482646	SPAG9	O60271	1321 aa	Known RBP	33.36	■■■□□ 2.93
CREM-233	ENST00000482646	PLXNC1	O60486	1568 aa		33.36	■■■□□ 2.93
CREM-233	ENST00000482646	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.36	■■■□□ 2.93
CREM-233	ENST00000482646	ADGRL2	O95490	1459 aa		33.35	■■■□□ 2.93
CREM-233	ENST00000482646	UHRF1BP1	Q6BDS2	1440 aa		33.29	■■■□□ 2.92
CREM-233	ENST00000482646	ROCK1	Q13464	1354 aa		33.29	■■■□□ 2.92
CREM-233	ENST00000482646	ANKRD30A	Q9BXX3	1397 aa		33.29	■■■□□ 2.92
CREM-233	ENST00000482646	CHIC2	Q9UKJ5	165 aa		33.28	■■■□□ 2.92
CREM-233	ENST00000482646	GCC2	Q8IWJ2	1684 aa		33.27	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms