RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TEX14Q8IWB6 1497 aa15.94■□□□□ 0.14
SPTLC1-206ENST00000482632 ABCA9Q8IUA7 1624 aa15.94■□□□□ 0.14
SPTLC1-206ENST00000482632 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
SPTLC1-206ENST00000482632 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
SPTLC1-206ENST00000482632 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
SPTLC1-206ENST00000482632 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
SPTLC1-206ENST00000482632 KIF14Q15058 1648 aa15.89■□□□□ 0.13
SPTLC1-206ENST00000482632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.135e-6■■■■□ 19.7
SPTLC1-206ENST00000482632 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
SPTLC1-206ENST00000482632 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
SPTLC1-206ENST00000482632 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
SPTLC1-206ENST00000482632 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
SPTLC1-206ENST00000482632 CFAP74Q9C0B2 1584 aa15.82■□□□□ 0.12
SPTLC1-206ENST00000482632 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
SPTLC1-206ENST00000482632 FANCAO15360 1455 aa15.78■□□□□ 0.12
SPTLC1-206ENST00000482632 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
SPTLC1-206ENST00000482632 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
SPTLC1-206ENST00000482632 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
SPTLC1-206ENST00000482632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.77■□□□□ 0.122e-9■■■■□ 25.4
SPTLC1-206ENST00000482632 NEO1Q92859 1461 aa15.77■□□□□ 0.11
SPTLC1-206ENST00000482632 EHBP1L1Q8N3D4 1523 aa15.76■□□□□ 0.11
SPTLC1-206ENST00000482632 CDC42BPAQ5VT25 1732 aa15.76■□□□□ 0.11
SPTLC1-206ENST00000482632 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
SPTLC1-206ENST00000482632 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
SPTLC1-206ENST00000482632 APLP2Q06481 763 aa15.75■□□□□ 0.11
SPTLC1-206ENST00000482632 PREX2Q70Z35 1606 aa15.75■□□□□ 0.11
SPTLC1-206ENST00000482632 PLCH2O75038 1416 aa15.74■□□□□ 0.11
SPTLC1-206ENST00000482632 AKNAQ7Z591 1439 aa15.74■□□□□ 0.11
SPTLC1-206ENST00000482632 PHLDB1Q86UU1 1377 aa15.73■□□□□ 0.11
SPTLC1-206ENST00000482632 ARAP3Q8WWN8 1544 aa15.73■□□□□ 0.11
SPTLC1-206ENST00000482632 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
SPTLC1-206ENST00000482632 EFCAB2Q5VUJ9 269 aa15.72■□□□□ 0.11
SPTLC1-206ENST00000482632 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
SPTLC1-206ENST00000482632 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
SPTLC1-206ENST00000482632 ZNF777Q9ULD5 760 aaPredicted RBP15.7■□□□□ 0.1
SPTLC1-206ENST00000482632 RICTORQ6R327 1708 aa15.7■□□□□ 0.1
SPTLC1-206ENST00000482632 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
SPTLC1-206ENST00000482632 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
SPTLC1-206ENST00000482632 HECW2Q9P2P5 1572 aa15.69■□□□□ 0.1
SPTLC1-206ENST00000482632 ITSN2Q9NZM3 1697 aa15.69■□□□□ 0.1
SPTLC1-206ENST00000482632 FRMPD1Q5SYB0 1578 aa15.68■□□□□ 0.1
SPTLC1-206ENST00000482632 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
SPTLC1-206ENST00000482632 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
SPTLC1-206ENST00000482632 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
SPTLC1-206ENST00000482632 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
SPTLC1-206ENST00000482632 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
SPTLC1-206ENST00000482632 GPATCH8Q9UKJ3 1502 aaKnown RBP15.63■□□□□ 0.09
SPTLC1-206ENST00000482632 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
SPTLC1-206ENST00000482632 SAMD9LQ8IVG5 1584 aa15.62■□□□□ 0.09
SPTLC1-206ENST00000482632 POGZQ7Z3K3 1410 aa15.62■□□□□ 0.09
SPTLC1-206ENST00000482632 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
SPTLC1-206ENST00000482632 ABCC1P33527 1531 aa15.62■□□□□ 0.09
SPTLC1-206ENST00000482632 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
SPTLC1-206ENST00000482632 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
SPTLC1-206ENST00000482632 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
SPTLC1-206ENST00000482632 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
SPTLC1-206ENST00000482632 ARHGEF40Q8TER5 1519 aa15.59■□□□□ 0.09
SPTLC1-206ENST00000482632 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.09
SPTLC1-206ENST00000482632 ARID4BQ4LE39 1312 aaPredicted RBP15.58■□□□□ 0.08
SPTLC1-206ENST00000482632 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.082e-6■■■■□ 22.2
SPTLC1-206ENST00000482632 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
SPTLC1-206ENST00000482632 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
SPTLC1-206ENST00000482632 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
SPTLC1-206ENST00000482632 PLEKHH2Q8IVE3 1493 aa15.55■□□□□ 0.08
SPTLC1-206ENST00000482632 YEATS2Q9ULM3 1422 aa15.55■□□□□ 0.08
SPTLC1-206ENST00000482632 KDM5CP41229 1560 aa15.54■□□□□ 0.08
SPTLC1-206ENST00000482632 ZNF644Q9H582 1327 aaPredicted RBP15.54■□□□□ 0.08
SPTLC1-206ENST00000482632 CAMSAP2Q08AD1 1489 aa15.53■□□□□ 0.08
SPTLC1-206ENST00000482632 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1-206ENST00000482632 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.08
SPTLC1-206ENST00000482632 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-206ENST00000482632 MYOM3Q5VTT5 1437 aa15.51■□□□□ 0.07
SPTLC1-206ENST00000482632 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
SPTLC1-206ENST00000482632 KIDINS220Q9ULH0 1771 aa15.49■□□□□ 0.07
SPTLC1-206ENST00000482632 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
SPTLC1-206ENST00000482632 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
SPTLC1-206ENST00000482632 DIP2CQ9Y2E4 1556 aa15.49■□□□□ 0.07
SPTLC1-206ENST00000482632 ATP10AO60312 1499 aa15.48■□□□□ 0.07
SPTLC1-206ENST00000482632 C9orf84Q5VXU9 1444 aa15.48■□□□□ 0.07
SPTLC1-206ENST00000482632 SIGLEC1Q9BZZ2 1709 aa15.48■□□□□ 0.07
SPTLC1-206ENST00000482632 PTPN23Q9H3S7 1636 aa15.47■□□□□ 0.07
SPTLC1-206ENST00000482632 MLECQ14165 292 aa15.47■□□□□ 0.07
SPTLC1-206ENST00000482632 BCORL1Q5H9F3 1711 aa15.47■□□□□ 0.07
SPTLC1-206ENST00000482632 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
SPTLC1-206ENST00000482632 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
SPTLC1-206ENST00000482632 CCDC141Q6ZP82 1450 aa15.46■□□□□ 0.06
SPTLC1-206ENST00000482632 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1-206ENST00000482632 MIA2Q96PC5 1412 aa15.44■□□□□ 0.06
SPTLC1-206ENST00000482632 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-206ENST00000482632 MBD5Q9P267 1494 aa15.43■□□□□ 0.06
SPTLC1-206ENST00000482632 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-206ENST00000482632 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
SPTLC1-206ENST00000482632 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
SPTLC1-206ENST00000482632 FER1L4A9Z1Z3 1794 aa15.42■□□□□ 0.06
SPTLC1-206ENST00000482632 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
SPTLC1-206ENST00000482632 ARHGEF5Q12774 1597 aa15.42■□□□□ 0.06
SPTLC1-206ENST00000482632 ADAMTSL3P82987 1691 aa15.41■□□□□ 0.06
SPTLC1-206ENST00000482632 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
SPTLC1-206ENST00000482632 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
SPTLC1-206ENST00000482632 TSPY4P0CV99 314 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms