RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 CDC42BPAQ5VT25 1732 aa18.38■□□□□ 0.53
TRAIP-208ENST00000482582 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
TRAIP-208ENST00000482582 PTPRMP28827 1452 aa18.37■□□□□ 0.53
TRAIP-208ENST00000482582 FRMPD1Q5SYB0 1578 aa18.37■□□□□ 0.53
TRAIP-208ENST00000482582 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
TRAIP-208ENST00000482582 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
TRAIP-208ENST00000482582 GPATCH8Q9UKJ3 1502 aaKnown RBP18.35■□□□□ 0.53
TRAIP-208ENST00000482582 PLCH2O75038 1416 aa18.35■□□□□ 0.53
TRAIP-208ENST00000482582 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
TRAIP-208ENST00000482582 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
TRAIP-208ENST00000482582 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
TRAIP-208ENST00000482582 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
TRAIP-208ENST00000482582 PHLDB1Q86UU1 1377 aa18.3■□□□□ 0.52
TRAIP-208ENST00000482582 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
TRAIP-208ENST00000482582 FANCAO15360 1455 aa18.29■□□□□ 0.52
TRAIP-208ENST00000482582 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
TRAIP-208ENST00000482582 NEO1Q92859 1461 aa18.28■□□□□ 0.52
TRAIP-208ENST00000482582 BCORL1Q5H9F3 1711 aa18.28■□□□□ 0.52
TRAIP-208ENST00000482582 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
TRAIP-208ENST00000482582 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
TRAIP-208ENST00000482582 HSPA2P54652 639 aa18.27■□□□□ 0.52
TRAIP-208ENST00000482582 EFCAB2Q5VUJ9 269 aa18.27■□□□□ 0.52
TRAIP-208ENST00000482582 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
TRAIP-208ENST00000482582 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
TRAIP-208ENST00000482582 FBXO41Q8TF61 875 aa18.26■□□□□ 0.51
TRAIP-208ENST00000482582 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
TRAIP-208ENST00000482582 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
TRAIP-208ENST00000482582 ZNF777Q9ULD5 760 aaPredicted RBP18.24■□□□□ 0.51
TRAIP-208ENST00000482582 SAMD9LQ8IVG5 1584 aa18.24■□□□□ 0.51
TRAIP-208ENST00000482582 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
TRAIP-208ENST00000482582 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
TRAIP-208ENST00000482582 LMTK3Q96Q04 1460 aa18.23■□□□□ 0.51
TRAIP-208ENST00000482582 RICTORQ6R327 1708 aa18.21■□□□□ 0.51
TRAIP-208ENST00000482582 MLECQ14165 292 aa18.21■□□□□ 0.51
TRAIP-208ENST00000482582 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
TRAIP-208ENST00000482582 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
TRAIP-208ENST00000482582 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
TRAIP-208ENST00000482582 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
TRAIP-208ENST00000482582 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
TRAIP-208ENST00000482582 SCAPERQ9BY12 1400 aa18.19■□□□□ 0.5
TRAIP-208ENST00000482582 ABCC1P33527 1531 aa18.18■□□□□ 0.5
TRAIP-208ENST00000482582 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
TRAIP-208ENST00000482582 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
TRAIP-208ENST00000482582 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
TRAIP-208ENST00000482582 ARHGEF40Q8TER5 1519 aa18.17■□□□□ 0.5
TRAIP-208ENST00000482582 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
TRAIP-208ENST00000482582 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
TRAIP-208ENST00000482582 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.49
TRAIP-208ENST00000482582 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
TRAIP-208ENST00000482582 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
TRAIP-208ENST00000482582 CEBPAP49715 358 aaPredicted RBP18.13■□□□□ 0.49
TRAIP-208ENST00000482582 AFAP1Q8N556 730 aa18.13■□□□□ 0.49
TRAIP-208ENST00000482582 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
TRAIP-208ENST00000482582 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
TRAIP-208ENST00000482582 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
TRAIP-208ENST00000482582 FAM50AQ14320 339 aaKnown RBP18.09■□□□□ 0.49
TRAIP-208ENST00000482582 ZMYM4Q5VZL5 1548 aa18.08■□□□□ 0.49
TRAIP-208ENST00000482582 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
TRAIP-208ENST00000482582 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.48
TRAIP-208ENST00000482582 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
TRAIP-208ENST00000482582 KDM5CP41229 1560 aa18.07■□□□□ 0.48
TRAIP-208ENST00000482582 CCDC141Q6ZP82 1450 aa18.04■□□□□ 0.48
TRAIP-208ENST00000482582 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
TRAIP-208ENST00000482582 ABCC5O15440 1437 aa18.04■□□□□ 0.48
TRAIP-208ENST00000482582 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
TRAIP-208ENST00000482582 DAPK1P53355 1430 aa18.02■□□□□ 0.48
TRAIP-208ENST00000482582 RSPH4AQ5TD94 716 aa18.02■□□□□ 0.48
TRAIP-208ENST00000482582 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
TRAIP-208ENST00000482582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
TRAIP-208ENST00000482582 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
TRAIP-208ENST00000482582 CROCC2H7BZ55 1655 aa18.01■□□□□ 0.47
TRAIP-208ENST00000482582 ATP10AO60312 1499 aa18.01■□□□□ 0.47
TRAIP-208ENST00000482582 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
TRAIP-208ENST00000482582 PTPRKQ15262 1439 aa18■□□□□ 0.47
TRAIP-208ENST00000482582 FER1L4A9Z1Z3 1794 aa18■□□□□ 0.47
TRAIP-208ENST00000482582 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
TRAIP-208ENST00000482582 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
TRAIP-208ENST00000482582 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
TRAIP-208ENST00000482582 ITGAEP38570 1179 aa17.98■□□□□ 0.47
TRAIP-208ENST00000482582 MAST1Q9Y2H9 1570 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
TRAIP-208ENST00000482582 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
TRAIP-208ENST00000482582 DIP2CQ9Y2E4 1556 aa17.96■□□□□ 0.46
TRAIP-208ENST00000482582 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
TRAIP-208ENST00000482582 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
TRAIP-208ENST00000482582 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
TRAIP-208ENST00000482582 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
TRAIP-208ENST00000482582 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
TRAIP-208ENST00000482582 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
TRAIP-208ENST00000482582 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
TRAIP-208ENST00000482582 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
TRAIP-208ENST00000482582 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
TRAIP-208ENST00000482582 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
TRAIP-208ENST00000482582 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
TRAIP-208ENST00000482582 A2MP01023 1474 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms