RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-210ENST00000482499 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
CMC1-210ENST00000482499 NLRP6P59044 892 aa12.95□□□□□ -0.34
CMC1-210ENST00000482499 PKD2Q13563 968 aa12.95□□□□□ -0.34
CMC1-210ENST00000482499 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
CMC1-210ENST00000482499 STK25O00506 426 aa12.93□□□□□ -0.34
CMC1-210ENST00000482499 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
CMC1-210ENST00000482499 RGL2O15211 777 aa12.92□□□□□ -0.34
CMC1-210ENST00000482499 ERBB3P21860 1342 aa12.9□□□□□ -0.34
CMC1-210ENST00000482499 RIMBP2O15034 1052 aa12.9□□□□□ -0.34
CMC1-210ENST00000482499 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
CMC1-210ENST00000482499 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
CMC1-210ENST00000482499 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
CMC1-210ENST00000482499 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
CMC1-210ENST00000482499 KHSRPQ92945 711 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■□□□□ 8.5
CMC1-210ENST00000482499 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
CMC1-210ENST00000482499 KIF3CO14782 793 aa12.77□□□□□ -0.37
CMC1-210ENST00000482499 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
CMC1-210ENST00000482499 PPP1R37O75864 691 aa12.73□□□□□ -0.37
CMC1-210ENST00000482499 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
CMC1-210ENST00000482499 NUDT7P0C024 238 aa12.64□□□□□ -0.39
CMC1-210ENST00000482499 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
CMC1-210ENST00000482499 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
CMC1-210ENST00000482499 SLC34A2O95436 690 aa12.6□□□□□ -0.39
CMC1-210ENST00000482499 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
CMC1-210ENST00000482499 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
CMC1-210ENST00000482499 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
CMC1-210ENST00000482499 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
CMC1-210ENST00000482499 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
CMC1-210ENST00000482499 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
CMC1-210ENST00000482499 LSM11P83369 360 aaKnown RBP eCLIP12.53□□□□□ -0.4
CMC1-210ENST00000482499 POTEEQ6S8J3 1075 aa12.52□□□□□ -0.41
CMC1-210ENST00000482499 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
CMC1-210ENST00000482499 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
CMC1-210ENST00000482499 FOXK1P85037 733 aa12.48□□□□□ -0.41
CMC1-210ENST00000482499 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
CMC1-210ENST00000482499 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
CMC1-210ENST00000482499 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
CMC1-210ENST00000482499 PBX2P40425 430 aa12.46□□□□□ -0.41
CMC1-210ENST00000482499 PTGER2P43116 358 aa12.46□□□□□ -0.41
CMC1-210ENST00000482499 DSG2Q14126 1118 aa12.46□□□□□ -0.41
CMC1-210ENST00000482499 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
CMC1-210ENST00000482499 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
CMC1-210ENST00000482499 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
CMC1-210ENST00000482499 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
CMC1-210ENST00000482499 PSEN2P49810 448 aa12.34□□□□□ -0.43
CMC1-210ENST00000482499 TBC1D12O60347 775 aa12.33□□□□□ -0.44
CMC1-210ENST00000482499 ADGRD1Q6QNK2 874 aa12.33□□□□□ -0.44
CMC1-210ENST00000482499 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
CMC1-210ENST00000482499 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
CMC1-210ENST00000482499 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
CMC1-210ENST00000482499 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
CMC1-210ENST00000482499 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
CMC1-210ENST00000482499 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
CMC1-210ENST00000482499 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
CMC1-210ENST00000482499 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
CMC1-210ENST00000482499 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
CMC1-210ENST00000482499 TK2O00142 265 aa12.25□□□□□ -0.45
CMC1-210ENST00000482499 HRO43593 1189 aa12.25□□□□□ -0.45
CMC1-210ENST00000482499 PDE4AP27815 886 aa12.23□□□□□ -0.45
CMC1-210ENST00000482499 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
CMC1-210ENST00000482499 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
CMC1-210ENST00000482499 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
CMC1-210ENST00000482499 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
CMC1-210ENST00000482499 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
CMC1-210ENST00000482499 FOSBP53539 338 aa12.15□□□□□ -0.46
CMC1-210ENST00000482499 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
CMC1-210ENST00000482499 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
CMC1-210ENST00000482499 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
CMC1-210ENST00000482499 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
CMC1-210ENST00000482499 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
CMC1-210ENST00000482499 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
CMC1-210ENST00000482499 EVI5O60447 810 aa12.13□□□□□ -0.47
CMC1-210ENST00000482499 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
CMC1-210ENST00000482499 MFSD10Q14728 455 aa12.11□□□□□ -0.47
CMC1-210ENST00000482499 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
CMC1-210ENST00000482499 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
CMC1-210ENST00000482499 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
CMC1-210ENST00000482499 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
CMC1-210ENST00000482499 MAP3K9P80192 1104 aa12.08□□□□□ -0.48
CMC1-210ENST00000482499 PTPREP23469 700 aa12.07□□□□□ -0.48
CMC1-210ENST00000482499 ADAM33Q9BZ11 813 aa12.07□□□□□ -0.48
CMC1-210ENST00000482499 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
CMC1-210ENST00000482499 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
CMC1-210ENST00000482499 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
CMC1-210ENST00000482499 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
CMC1-210ENST00000482499 PTPN5P54829 565 aa12.02□□□□□ -0.49
CMC1-210ENST00000482499 PCDHGA10Q9Y5H3 936 aa12□□□□□ -0.49
CMC1-210ENST00000482499 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.49
CMC1-210ENST00000482499 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
CMC1-210ENST00000482499 GOLGA8CPA6NN73 597 aa11.93□□□□□ -0.5
CMC1-210ENST00000482499 COL9A1P20849 921 aa11.93□□□□□ -0.5
CMC1-210ENST00000482499 PROX2Q3B8N5 592 aa11.93□□□□□ -0.5
CMC1-210ENST00000482499 WNT2BQ93097 391 aa11.93□□□□□ -0.5
CMC1-210ENST00000482499 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
CMC1-210ENST00000482499 CAMK2BQ13554 666 aa11.92□□□□□ -0.5
CMC1-210ENST00000482499 TYW1BQ6NUM6 668 aa11.91□□□□□ -0.5
CMC1-210ENST00000482499 DPYSL4O14531 572 aa11.9□□□□□ -0.5
CMC1-210ENST00000482499 PHF14O94880 888 aa11.9□□□□□ -0.5
CMC1-210ENST00000482499 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
CMC1-210ENST00000482499 FBXW7Q969H0 707 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 1000.3 ms