RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
CTNNB1-213ENST00000482042 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-213ENST00000482042 POTEMA6NI47 508 aa12.58□□□□□ -0.4
CTNNB1-213ENST00000482042 SNPHO15079 494 aa12.58□□□□□ -0.4
CTNNB1-213ENST00000482042 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
CTNNB1-213ENST00000482042 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
CTNNB1-213ENST00000482042 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
CTNNB1-213ENST00000482042 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
CTNNB1-213ENST00000482042 ST18O60284 1047 aa12.52□□□□□ -0.41
CTNNB1-213ENST00000482042 PPP1R37O75864 691 aa12.51□□□□□ -0.41
CTNNB1-213ENST00000482042 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
CTNNB1-213ENST00000482042 HOXB3P14651 431 aaPredicted RBP12.45□□□□□ -0.42
CTNNB1-213ENST00000482042 KIF3CO14782 793 aa12.43□□□□□ -0.42
CTNNB1-213ENST00000482042 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
CTNNB1-213ENST00000482042 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
CTNNB1-213ENST00000482042 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
CTNNB1-213ENST00000482042 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
CTNNB1-213ENST00000482042 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
CTNNB1-213ENST00000482042 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
CTNNB1-213ENST00000482042 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
CTNNB1-213ENST00000482042 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
CTNNB1-213ENST00000482042 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
CTNNB1-213ENST00000482042 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
CTNNB1-213ENST00000482042 ZNF710Q8N1W2 664 aa12.34□□□□□ -0.43
CTNNB1-213ENST00000482042 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
CTNNB1-213ENST00000482042 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
CTNNB1-213ENST00000482042 ZSWIM6Q9HCJ5 1215 aa12.33□□□□□ -0.44
CTNNB1-213ENST00000482042 HOXB1P14653 301 aaPredicted RBP12.32□□□□□ -0.44
CTNNB1-213ENST00000482042 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
CTNNB1-213ENST00000482042 EMP3P54852 163 aa12.3□□□□□ -0.44
CTNNB1-213ENST00000482042 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
CTNNB1-213ENST00000482042 FOXK1P85037 733 aa12.26□□□□□ -0.45
CTNNB1-213ENST00000482042 GPR153Q6NV75 609 aa12.26□□□□□ -0.45
CTNNB1-213ENST00000482042 CECR2Q9BXF3 1484 aa12.26□□□□□ -0.45
CTNNB1-213ENST00000482042 SLC34A2O95436 690 aa12.25□□□□□ -0.45
CTNNB1-213ENST00000482042 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
CTNNB1-213ENST00000482042 CRISPLD2Q9H0B8 497 aa12.25□□□□□ -0.45
CTNNB1-213ENST00000482042 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
CTNNB1-213ENST00000482042 PEG3Q9GZU2 1588 aa12.24□□□□□ -0.45
CTNNB1-213ENST00000482042 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.45
CTNNB1-213ENST00000482042 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
CTNNB1-213ENST00000482042 DSG2Q14126 1118 aa12.2□□□□□ -0.46
CTNNB1-213ENST00000482042 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
CTNNB1-213ENST00000482042 ARSIQ5FYB1 569 aa12.19□□□□□ -0.46
CTNNB1-213ENST00000482042 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
CTNNB1-213ENST00000482042 MROH2BQ7Z745 1585 aa12.19□□□□□ -0.46
CTNNB1-213ENST00000482042 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
CTNNB1-213ENST00000482042 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
CTNNB1-213ENST00000482042 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
CTNNB1-213ENST00000482042 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
CTNNB1-213ENST00000482042 PDE4AP27815 886 aa12.17□□□□□ -0.46
CTNNB1-213ENST00000482042 PCDHGA4Q9Y5G9 962 aa12.17□□□□□ -0.46
CTNNB1-213ENST00000482042 ERBB3P21860 1342 aa12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 WIZO95785 1651 aa12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTNNB1-213ENST00000482042 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
CTNNB1-213ENST00000482042 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
CTNNB1-213ENST00000482042 MFSD10Q14728 455 aa12.12□□□□□ -0.47
CTNNB1-213ENST00000482042 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
CTNNB1-213ENST00000482042 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
CTNNB1-213ENST00000482042 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
CTNNB1-213ENST00000482042 NUDT7P0C024 238 aa12.1□□□□□ -0.47
CTNNB1-213ENST00000482042 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
CTNNB1-213ENST00000482042 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
CTNNB1-213ENST00000482042 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
CTNNB1-213ENST00000482042 RSF1Q96T23 1441 aaPredicted RBP12.08□□□□□ -0.48
CTNNB1-213ENST00000482042 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
CTNNB1-213ENST00000482042 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
CTNNB1-213ENST00000482042 KRTAP3-3Q9BYR6 98 aa12.07□□□□□ -0.48
CTNNB1-213ENST00000482042 KRTAP3-2Q9BYR7 98 aa12.07□□□□□ -0.48
CTNNB1-213ENST00000482042 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
CTNNB1-213ENST00000482042 TBC1D12O60347 775 aa12.04□□□□□ -0.48
CTNNB1-213ENST00000482042 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
CTNNB1-213ENST00000482042 CFAP44Q96MT7 982 aa12.04□□□□□ -0.48
CTNNB1-213ENST00000482042 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
CTNNB1-213ENST00000482042 LHX6Q9UPM6 363 aa12.03□□□□□ -0.48
CTNNB1-213ENST00000482042 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
CTNNB1-213ENST00000482042 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
CTNNB1-213ENST00000482042 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
CTNNB1-213ENST00000482042 CAMK2BQ13554 666 aa11.95□□□□□ -0.5
CTNNB1-213ENST00000482042 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
CTNNB1-213ENST00000482042 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
CTNNB1-213ENST00000482042 PBX2P40425 430 aa11.92□□□□□ -0.5
CTNNB1-213ENST00000482042 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
CTNNB1-213ENST00000482042 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
CTNNB1-213ENST00000482042 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
CTNNB1-213ENST00000482042 EVI5O60447 810 aa11.88□□□□□ -0.51
CTNNB1-213ENST00000482042 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
CTNNB1-213ENST00000482042 MMRN1Q13201 1228 aa11.88□□□□□ -0.51
CTNNB1-213ENST00000482042 PPP4R3BQ5MIZ7 849 aa11.88□□□□□ -0.51
CTNNB1-213ENST00000482042 LSM11P83369 360 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTNNB1-213ENST00000482042 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
CTNNB1-213ENST00000482042 FOSBP53539 338 aa11.83□□□□□ -0.52
CTNNB1-213ENST00000482042 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
CTNNB1-213ENST00000482042 ARHGAP33O14559 1287 aa11.82□□□□□ -0.52
CTNNB1-213ENST00000482042 ZNF454Q8N9F8 522 aa11.82□□□□□ -0.52
CTNNB1-213ENST00000482042 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms