RNA–Protein interactions for RNA: ENST00000481997.5

ARPC1B-217, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 945 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-217ENST00000481997 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
ARPC1B-217ENST00000481997 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
ARPC1B-217ENST00000481997 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
ARPC1B-217ENST00000481997 WDR7Q9Y4E6 1490 aa22.78■■□□□ 1.24
ARPC1B-217ENST00000481997 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
ARPC1B-217ENST00000481997 CDC42BPAQ5VT25 1732 aa22.74■■□□□ 1.23
ARPC1B-217ENST00000481997 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
ARPC1B-217ENST00000481997 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
ARPC1B-217ENST00000481997 CERKQ8TCT0 537 aa22.71■■□□□ 1.23
ARPC1B-217ENST00000481997 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
ARPC1B-217ENST00000481997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.71■■□□□ 1.23
ARPC1B-217ENST00000481997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.71■■□□□ 1.231e-6■■■■■ 29.5
ARPC1B-217ENST00000481997 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
ARPC1B-217ENST00000481997 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
ARPC1B-217ENST00000481997 TTC37Q6PGP7 1564 aa22.7■■□□□ 1.22
ARPC1B-217ENST00000481997 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
ARPC1B-217ENST00000481997 HRCP23327 699 aa22.69■■□□□ 1.22
ARPC1B-217ENST00000481997 TCOF1Q13428 1488 aaKnown RBP22.67■■□□□ 1.22
ARPC1B-217ENST00000481997 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
ARPC1B-217ENST00000481997 MYO5CQ9NQX4 1742 aa22.67■■□□□ 1.22
ARPC1B-217ENST00000481997 PREX2Q70Z35 1606 aa22.67■■□□□ 1.22
ARPC1B-217ENST00000481997 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
ARPC1B-217ENST00000481997 CFDP1Q9UEE9 299 aaPredicted RBP22.64■■□□□ 1.21
ARPC1B-217ENST00000481997 PTPRMP28827 1452 aa22.64■■□□□ 1.21
ARPC1B-217ENST00000481997 ABCA9Q8IUA7 1624 aa22.64■■□□□ 1.21
ARPC1B-217ENST00000481997 CAMSAP2Q08AD1 1489 aa22.58■■□□□ 1.2
ARPC1B-217ENST00000481997 SPATA31D1Q6ZQQ2 1576 aa22.58■■□□□ 1.2
ARPC1B-217ENST00000481997 PLCH2O75038 1416 aa22.57■■□□□ 1.2
ARPC1B-217ENST00000481997 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
ARPC1B-217ENST00000481997 ARHGAP5Q13017 1502 aa22.57■■□□□ 1.2
ARPC1B-217ENST00000481997 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
ARPC1B-217ENST00000481997 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
ARPC1B-217ENST00000481997 ITGAEP38570 1179 aa22.54■■□□□ 1.2
ARPC1B-217ENST00000481997 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
ARPC1B-217ENST00000481997 SAMD9LQ8IVG5 1584 aa22.52■■□□□ 1.2
ARPC1B-217ENST00000481997 DNMT1P26358 1616 aaKnown RBP22.52■■□□□ 1.2
ARPC1B-217ENST00000481997 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
ARPC1B-217ENST00000481997 PLEKHH2Q8IVE3 1493 aa22.48■■□□□ 1.19
ARPC1B-217ENST00000481997 ADAMTSL3P82987 1691 aa22.47■■□□□ 1.19
ARPC1B-217ENST00000481997 HSPA2P54652 639 aa22.47■■□□□ 1.19
ARPC1B-217ENST00000481997 DAPK1P53355 1430 aa22.47■■□□□ 1.19
ARPC1B-217ENST00000481997 CD109Q6YHK3 1445 aa22.47■■□□□ 1.19
ARPC1B-217ENST00000481997 PTPRKQ15262 1439 aa22.46■■□□□ 1.19
ARPC1B-217ENST00000481997 ARHGEF5Q12774 1597 aa22.46■■□□□ 1.19
ARPC1B-217ENST00000481997 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
ARPC1B-217ENST00000481997 ABCC5O15440 1437 aa22.45■■□□□ 1.18
ARPC1B-217ENST00000481997 FANCAO15360 1455 aa22.44■■□□□ 1.18
ARPC1B-217ENST00000481997 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
ARPC1B-217ENST00000481997 CFAP74Q9C0B2 1584 aa22.42■■□□□ 1.18
ARPC1B-217ENST00000481997 ABCC1P33527 1531 aa22.42■■□□□ 1.18
ARPC1B-217ENST00000481997 SYCP2Q9BX26 1530 aa22.42■■□□□ 1.18
ARPC1B-217ENST00000481997 MBD5Q9P267 1494 aa22.41■■□□□ 1.18
ARPC1B-217ENST00000481997 ARID4BQ4LE39 1312 aaPredicted RBP22.4■■□□□ 1.18
ARPC1B-217ENST00000481997 RSPH4AQ5TD94 716 aa22.4■■□□□ 1.18
ARPC1B-217ENST00000481997 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.17
ARPC1B-217ENST00000481997 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
ARPC1B-217ENST00000481997 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
ARPC1B-217ENST00000481997 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.17
ARPC1B-217ENST00000481997 AKNAQ7Z591 1439 aa22.38■■□□□ 1.17
ARPC1B-217ENST00000481997 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
ARPC1B-217ENST00000481997 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
ARPC1B-217ENST00000481997 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
ARPC1B-217ENST00000481997 SETD5Q9C0A6 1442 aa22.35■■□□□ 1.17
ARPC1B-217ENST00000481997 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
ARPC1B-217ENST00000481997 NEO1Q92859 1461 aa22.34■■□□□ 1.17
ARPC1B-217ENST00000481997 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
ARPC1B-217ENST00000481997 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
ARPC1B-217ENST00000481997 ADGRL2O95490 1459 aa22.33■■□□□ 1.16
ARPC1B-217ENST00000481997 C9orf84Q5VXU9 1444 aa22.32■■□□□ 1.16
ARPC1B-217ENST00000481997 MADDQ8WXG6 1647 aa22.32■■□□□ 1.16
ARPC1B-217ENST00000481997 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
ARPC1B-217ENST00000481997 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
ARPC1B-217ENST00000481997 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
ARPC1B-217ENST00000481997 NAIPQ13075 1403 aa22.31■■□□□ 1.16
ARPC1B-217ENST00000481997 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
ARPC1B-217ENST00000481997 SCAPERQ9BY12 1400 aa22.3■■□□□ 1.16
ARPC1B-217ENST00000481997 TRAPPC8Q9Y2L5 1435 aa22.3■■□□□ 1.16
ARPC1B-217ENST00000481997 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
ARPC1B-217ENST00000481997 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
ARPC1B-217ENST00000481997 RRP7BPQ9NSQ0 103 aa22.29■■□□□ 1.16
ARPC1B-217ENST00000481997 NCOA1Q15788 1441 aa22.28■■□□□ 1.16
ARPC1B-217ENST00000481997 DMRT2Q9Y5R5 561 aa22.23■■□□□ 1.15
ARPC1B-217ENST00000481997 PLXNC1O60486 1568 aa22.23■■□□□ 1.15
ARPC1B-217ENST00000481997 RIMS1Q86UR5 1692 aaKnown RBP22.23■■□□□ 1.15
ARPC1B-217ENST00000481997 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
ARPC1B-217ENST00000481997 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
ARPC1B-217ENST00000481997 AFAP1Q8N556 730 aa22.21■■□□□ 1.15
ARPC1B-217ENST00000481997 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
ARPC1B-217ENST00000481997 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.14
ARPC1B-217ENST00000481997 DENND4BO75064 1496 aaPredicted RBP22.2■■□□□ 1.14
ARPC1B-217ENST00000481997 INO80Q9ULG1 1556 aaPredicted RBP22.2■■□□□ 1.14
ARPC1B-217ENST00000481997 RAPGEF3O95398 923 aa22.19■■□□□ 1.14
ARPC1B-217ENST00000481997 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
ARPC1B-217ENST00000481997 KDM5CP41229 1560 aa22.19■■□□□ 1.14
ARPC1B-217ENST00000481997 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
ARPC1B-217ENST00000481997 RICTORQ6R327 1708 aa22.17■■□□□ 1.14
ARPC1B-217ENST00000481997 ATP7AQ04656 1500 aa22.17■■□□□ 1.14
ARPC1B-217ENST00000481997 ACIN1Q9UKV3 1341 aaKnown RBP22.15■■□□□ 1.14
ARPC1B-217ENST00000481997 CCER1Q8TC90 406 aaPredicted RBP22.15■■□□□ 1.14
ARPC1B-217ENST00000481997 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms