RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 RICTORQ6R327 1708 aa27.78■■■□□ 2.04
SMIM11A-205ENST00000481710 ITSN2Q9NZM3 1697 aa27.78■■■□□ 2.04
SMIM11A-205ENST00000481710 AKNAQ7Z591 1439 aa27.78■■■□□ 2.04
SMIM11A-205ENST00000481710 PHLDB1Q86UU1 1377 aa27.77■■■□□ 2.04
SMIM11A-205ENST00000481710 GPATCH8Q9UKJ3 1502 aaKnown RBP27.74■■■□□ 2.03
SMIM11A-205ENST00000481710 NCOA2Q15596 1464 aa27.74■■■□□ 2.03
SMIM11A-205ENST00000481710 ADGRL1O94910 1474 aa27.72■■■□□ 2.03
SMIM11A-205ENST00000481710 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
SMIM11A-205ENST00000481710 SAMD9LQ8IVG5 1584 aa27.7■■■□□ 2.03
SMIM11A-205ENST00000481710 ABCC1P33527 1531 aa27.69■■■□□ 2.02
SMIM11A-205ENST00000481710 CCNB3Q8WWL7 1395 aa27.69■■■□□ 2.02
SMIM11A-205ENST00000481710 EFCAB2Q5VUJ9 269 aa27.68■■■□□ 2.02
SMIM11A-205ENST00000481710 DENND4BO75064 1496 aaPredicted RBP27.67■■■□□ 2.02
SMIM11A-205ENST00000481710 APLP2Q06481 763 aa27.65■■■□□ 2.02
SMIM11A-205ENST00000481710 SCAPERQ9BY12 1400 aa27.64■■■□□ 2.02
SMIM11A-205ENST00000481710 RAPGEF3O95398 923 aa27.63■■■□□ 2.01
SMIM11A-205ENST00000481710 POGZQ7Z3K3 1410 aa27.62■■■□□ 2.01
SMIM11A-205ENST00000481710 ZMYM4Q5VZL5 1548 aa27.62■■■□□ 2.01
SMIM11A-205ENST00000481710 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
SMIM11A-205ENST00000481710 SYCP2Q9BX26 1530 aa27.59■■■□□ 2.01
SMIM11A-205ENST00000481710 KDM5CP41229 1560 aa27.57■■■□□ 2
SMIM11A-205ENST00000481710 CFDP1Q9UEE9 299 aaPredicted RBP27.56■■■□□ 2
SMIM11A-205ENST00000481710 ARHGEF40Q8TER5 1519 aa27.56■■■□□ 2
SMIM11A-205ENST00000481710 ZNF777Q9ULD5 760 aaPredicted RBP27.55■■■□□ 2
SMIM11A-205ENST00000481710 ZNF518AQ6AHZ1 1483 aa27.55■■■□□ 2
SMIM11A-205ENST00000481710 HECW2Q9P2P5 1572 aa27.52■■■□□ 2
SMIM11A-205ENST00000481710 CAMSAP2Q08AD1 1489 aa27.51■■■□□ 2
SMIM11A-205ENST00000481710 MYOM3Q5VTT5 1437 aa27.51■■□□□ 1.99
SMIM11A-205ENST00000481710 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
SMIM11A-205ENST00000481710 PLEKHH2Q8IVE3 1493 aa27.51■■□□□ 1.99
SMIM11A-205ENST00000481710 ZFYVE16Q7Z3T8 1539 aa27.5■■□□□ 1.99
SMIM11A-205ENST00000481710 ZNF644Q9H582 1327 aaPredicted RBP27.48■■□□□ 1.99
SMIM11A-205ENST00000481710 KIAA1107Q9UPP5 1409 aa27.47■■□□□ 1.99
SMIM11A-205ENST00000481710 YEATS2Q9ULM3 1422 aa27.46■■□□□ 1.99
SMIM11A-205ENST00000481710 KIDINS220Q9ULH0 1771 aa27.45■■□□□ 1.99
SMIM11A-205ENST00000481710 MAGI2Q86UL8 1455 aa27.45■■□□□ 1.99
SMIM11A-205ENST00000481710 SIGLEC1Q9BZZ2 1709 aa27.45■■□□□ 1.99
SMIM11A-205ENST00000481710 ABCA6Q8N139 1617 aa27.45■■□□□ 1.98
SMIM11A-205ENST00000481710 AFAP1Q8N556 730 aa27.44■■□□□ 1.98
SMIM11A-205ENST00000481710 PTPN23Q9H3S7 1636 aa27.43■■□□□ 1.98
SMIM11A-205ENST00000481710 MBD5Q9P267 1494 aa27.43■■□□□ 1.98
SMIM11A-205ENST00000481710 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
SMIM11A-205ENST00000481710 MIA2Q96PC5 1412 aa27.42■■□□□ 1.98
SMIM11A-205ENST00000481710 HNRNPMP52272 730 aaKnown RBP eCLIP27.42■■□□□ 1.98
SMIM11A-205ENST00000481710 DIP2CQ9Y2E4 1556 aa27.42■■□□□ 1.98
SMIM11A-205ENST00000481710 ARHGEF5Q12774 1597 aa27.39■■□□□ 1.98
SMIM11A-205ENST00000481710 MLH3Q9UHC1 1453 aa27.39■■□□□ 1.98
SMIM11A-205ENST00000481710 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
SMIM11A-205ENST00000481710 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
SMIM11A-205ENST00000481710 PPARGC1BQ86YN6 1023 aaKnown RBP27.35■■□□□ 1.97
SMIM11A-205ENST00000481710 CCDC141Q6ZP82 1450 aa27.35■■□□□ 1.97
SMIM11A-205ENST00000481710 CROCC2H7BZ55 1655 aa27.34■■□□□ 1.97
SMIM11A-205ENST00000481710 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
SMIM11A-205ENST00000481710 BCORL1Q5H9F3 1711 aa27.31■■□□□ 1.96
SMIM11A-205ENST00000481710 ATP10AO60312 1499 aa27.31■■□□□ 1.96
SMIM11A-205ENST00000481710 REREQ9P2R6 1566 aa27.31■■□□□ 1.96
SMIM11A-205ENST00000481710 ADGBQ8N7X0 1667 aa27.3■■□□□ 1.96
SMIM11A-205ENST00000481710 C9orf84Q5VXU9 1444 aa27.3■■□□□ 1.96
SMIM11A-205ENST00000481710 SPAG9O60271 1321 aaKnown RBP27.29■■□□□ 1.96
SMIM11A-205ENST00000481710 DNMT1P26358 1616 aaKnown RBP27.28■■□□□ 1.96
SMIM11A-205ENST00000481710 MYT1LQ9UL68 1186 aa27.28■■□□□ 1.96
SMIM11A-205ENST00000481710 MAST1Q9Y2H9 1570 aa27.26■■□□□ 1.96
SMIM11A-205ENST00000481710 ADAMTSL3P82987 1691 aa27.24■■□□□ 1.95
SMIM11A-205ENST00000481710 KDM4FA0A1W2PPD8 638 aa27.22■■□□□ 1.95
SMIM11A-205ENST00000481710 RTEL1-TNFRSF6BF6WH68 1400 aa27.22■■□□□ 1.95
SMIM11A-205ENST00000481710 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
SMIM11A-205ENST00000481710 RSPH4AQ5TD94 716 aa27.19■■□□□ 1.94
SMIM11A-205ENST00000481710 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
SMIM11A-205ENST00000481710 ARID4BQ4LE39 1312 aaPredicted RBP27.18■■□□□ 1.94
SMIM11A-205ENST00000481710 DAPK1P53355 1430 aa27.18■■□□□ 1.94
SMIM11A-205ENST00000481710 ABCC5O15440 1437 aa27.17■■□□□ 1.94
SMIM11A-205ENST00000481710 SHANK2Q9UPX8 1470 aa27.17■■□□□ 1.94
SMIM11A-205ENST00000481710 FER1L4A9Z1Z3 1794 aa27.17■■□□□ 1.94
SMIM11A-205ENST00000481710 AGLP35573 1532 aa27.16■■□□□ 1.94
SMIM11A-205ENST00000481710 A2MP01023 1474 aa27.15■■□□□ 1.94
SMIM11A-205ENST00000481710 RIMS1Q86UR5 1692 aaKnown RBP27.14■■□□□ 1.93
SMIM11A-205ENST00000481710 FAM50AQ14320 339 aaKnown RBP27.12■■□□□ 1.93
SMIM11A-205ENST00000481710 TSPY4P0CV99 314 aa27.11■■□□□ 1.93
SMIM11A-205ENST00000481710 TSPY10P0CW01 314 aa27.11■■□□□ 1.93
SMIM11A-205ENST00000481710 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
SMIM11A-205ENST00000481710 MLECQ14165 292 aa27.06■■□□□ 1.92
SMIM11A-205ENST00000481710 DHX29Q7Z478 1369 aaKnown RBP27.03■■□□□ 1.92
SMIM11A-205ENST00000481710 EIF2AK4Q9P2K8 1649 aaKnown RBP27.02■■□□□ 1.92
SMIM11A-205ENST00000481710 ADGRL2O95490 1459 aa27.01■■□□□ 1.91
SMIM11A-205ENST00000481710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.01■■□□□ 1.91
SMIM11A-205ENST00000481710 DUOX2Q9NRD8 1548 aa27■■□□□ 1.91
SMIM11A-205ENST00000481710 PTPRKQ15262 1439 aa27■■□□□ 1.91
SMIM11A-205ENST00000481710 PTPRMP28827 1452 aa26.99■■□□□ 1.91
SMIM11A-205ENST00000481710 CHIC2Q9UKJ5 165 aa26.98■■□□□ 1.91
SMIM11A-205ENST00000481710 RNF17Q9BXT8 1623 aaKnown RBP26.98■■□□□ 1.91
SMIM11A-205ENST00000481710 KIF15Q9NS87 1388 aa26.97■■□□□ 1.91
SMIM11A-205ENST00000481710 CLTCQ00610 1675 aaKnown RBP26.97■■□□□ 1.91
SMIM11A-205ENST00000481710 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
SMIM11A-205ENST00000481710 NCOA1Q15788 1441 aa26.94■■□□□ 1.9
SMIM11A-205ENST00000481710 MROH2AA6NES4 1674 aa26.94■■□□□ 1.9
SMIM11A-205ENST00000481710 ANKRD30AQ9BXX3 1397 aa26.94■■□□□ 1.9
SMIM11A-205ENST00000481710 C3P01024 1663 aa26.93■■□□□ 1.9
SMIM11A-205ENST00000481710 MROH1Q8NDA8 1641 aa26.92■■□□□ 1.9
SMIM11A-205ENST00000481710 RRP7BPQ9NSQ0 103 aa26.91■■□□□ 1.9
SMIM11A-205ENST00000481710 ERBINQ96RT1 1412 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms