RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CDC42BPAQ5VT25 1732 aa35.43■■■■□ 3.26
SHISA4-203ENST00000481699 ARAP3Q8WWN8 1544 aa35.41■■■■□ 3.26
SHISA4-203ENST00000481699 ZNF777Q9ULD5 760 aaPredicted RBP35.4■■■■□ 3.26
SHISA4-203ENST00000481699 TEX14Q8IWB6 1497 aa35.4■■■■□ 3.26
SHISA4-203ENST00000481699 TSPOAP1O95153 1857 aa35.38■■■■□ 3.25
SHISA4-203ENST00000481699 FANCAO15360 1455 aa35.37■■■■□ 3.25
SHISA4-203ENST00000481699 MIA2Q96PC5 1412 aa35.36■■■■□ 3.25
SHISA4-203ENST00000481699 FGD6Q6ZV73 1430 aa35.34■■■■□ 3.25
SHISA4-203ENST00000481699 CDC42BPBQ9Y5S2 1711 aa35.34■■■■□ 3.25
SHISA4-203ENST00000481699 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
SHISA4-203ENST00000481699 NEO1Q92859 1461 aa35.29■■■■□ 3.24
SHISA4-203ENST00000481699 PPRC1Q5VV67 1664 aaKnown RBP35.27■■■■□ 3.24
SHISA4-203ENST00000481699 AKNAQ7Z591 1439 aa35.26■■■■□ 3.24
SHISA4-203ENST00000481699 FAM50AQ14320 339 aaKnown RBP35.26■■■■□ 3.24
SHISA4-203ENST00000481699 KDM6BO15054 1643 aa35.24■■■■□ 3.23
SHISA4-203ENST00000481699 PLEKHH2Q8IVE3 1493 aa35.24■■■■□ 3.23
SHISA4-203ENST00000481699 PTPN23Q9H3S7 1636 aa35.24■■■■□ 3.23
SHISA4-203ENST00000481699 ZNF644Q9H582 1327 aaPredicted RBP35.23■■■■□ 3.23
SHISA4-203ENST00000481699 CAMSAP2Q08AD1 1489 aa35.22■■■■□ 3.23
SHISA4-203ENST00000481699 ADGRL1O94910 1474 aa35.21■■■■□ 3.23
SHISA4-203ENST00000481699 SAMD9LQ8IVG5 1584 aa35.21■■■■□ 3.23
SHISA4-203ENST00000481699 KDM4FA0A1W2PPD8 638 aa35.2■■■■□ 3.23
SHISA4-203ENST00000481699 RRBP1Q9P2E9 1410 aaKnown RBP35.18■■■■□ 3.22
SHISA4-203ENST00000481699 TCOF1Q13428 1488 aaKnown RBP35.17■■■■□ 3.22
SHISA4-203ENST00000481699 SCAPERQ9BY12 1400 aa35.15■■■■□ 3.22
SHISA4-203ENST00000481699 ABCC1P33527 1531 aa35.15■■■■□ 3.22
SHISA4-203ENST00000481699 KIAA1107Q9UPP5 1409 aa35.15■■■■□ 3.22
SHISA4-203ENST00000481699 HNRNPMP52272 730 aaKnown RBP eCLIP35.14■■■■□ 3.22
SHISA4-203ENST00000481699 SYCP2Q9BX26 1530 aa35.11■■■■□ 3.21
SHISA4-203ENST00000481699 DENND4BO75064 1496 aaPredicted RBP35.09■■■■□ 3.21
SHISA4-203ENST00000481699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.09■■■■□ 3.21
SHISA4-203ENST00000481699 RSPH4AQ5TD94 716 aa35.08■■■■□ 3.21
SHISA4-203ENST00000481699 ARHGEF12Q9NZN5 1544 aa35.04■■■■□ 3.2
SHISA4-203ENST00000481699 ITGAEP38570 1179 aa35.02■■■■□ 3.2
SHISA4-203ENST00000481699 CCDC141Q6ZP82 1450 aa35.02■■■■□ 3.2
SHISA4-203ENST00000481699 MBD5Q9P267 1494 aa35.02■■■■□ 3.2
SHISA4-203ENST00000481699 POGZQ7Z3K3 1410 aa35.01■■■■□ 3.2
SHISA4-203ENST00000481699 ZNF518AQ6AHZ1 1483 aa35.01■■■■□ 3.19
SHISA4-203ENST00000481699 ARHGEF5Q12774 1597 aa35■■■■□ 3.19
SHISA4-203ENST00000481699 TRAPPC8Q9Y2L5 1435 aa35■■■■□ 3.19
SHISA4-203ENST00000481699 RAPGEF3O95398 923 aa35■■■■□ 3.19
SHISA4-203ENST00000481699 TSPY4P0CV99 314 aa35■■■■□ 3.19
SHISA4-203ENST00000481699 TSPY10P0CW01 314 aa35■■■■□ 3.19
SHISA4-203ENST00000481699 MYT1LQ9UL68 1186 aa34.99■■■■□ 3.19
SHISA4-203ENST00000481699 AFAP1Q8N556 730 aa34.98■■■■□ 3.19
SHISA4-203ENST00000481699 DAPK1P53355 1430 aa34.97■■■■□ 3.19
SHISA4-203ENST00000481699 DNMT1P26358 1616 aaKnown RBP34.95■■■■□ 3.19
SHISA4-203ENST00000481699 TRIM26Q12899 539 aaPredicted RBP34.95■■■■□ 3.19
SHISA4-203ENST00000481699 ABCC5O15440 1437 aa34.94■■■■□ 3.18
SHISA4-203ENST00000481699 SPAG9O60271 1321 aaKnown RBP34.93■■■■□ 3.18
SHISA4-203ENST00000481699 COL17A1Q9UMD9 1497 aaPredicted RBP34.92■■■■□ 3.18
SHISA4-203ENST00000481699 ILDR1Q86SU0 546 aaPredicted RBP34.9■■■■□ 3.18
SHISA4-203ENST00000481699 RICTORQ6R327 1708 aa34.89■■■■□ 3.18
SHISA4-203ENST00000481699 C9orf84Q5VXU9 1444 aa34.87■■■■□ 3.17
SHISA4-203ENST00000481699 SHANK2Q9UPX8 1470 aa34.86■■■■□ 3.17
SHISA4-203ENST00000481699 CHIC2Q9UKJ5 165 aa34.86■■■■□ 3.17
SHISA4-203ENST00000481699 KDM5CP41229 1560 aa34.86■■■■□ 3.17
SHISA4-203ENST00000481699 FRMPD1Q5SYB0 1578 aa34.86■■■■□ 3.17
SHISA4-203ENST00000481699 CROCC2H7BZ55 1655 aa34.84■■■■□ 3.17
SHISA4-203ENST00000481699 HECW2Q9P2P5 1572 aa34.81■■■■□ 3.16
SHISA4-203ENST00000481699 ZMYM4Q5VZL5 1548 aa34.81■■■■□ 3.16
SHISA4-203ENST00000481699 MLH3Q9UHC1 1453 aa34.8■■■■□ 3.16
SHISA4-203ENST00000481699 RTEL1-TNFRSF6BF6WH68 1400 aa34.8■■■■□ 3.16
SHISA4-203ENST00000481699 MAST1Q9Y2H9 1570 aa34.79■■■■□ 3.16
SHISA4-203ENST00000481699 MAGI2Q86UL8 1455 aa34.78■■■■□ 3.16
SHISA4-203ENST00000481699 ANKRD30AQ9BXX3 1397 aa34.78■■■■□ 3.16
SHISA4-203ENST00000481699 ATP7AQ04656 1500 aa34.78■■■■□ 3.16
SHISA4-203ENST00000481699 PTPRKQ15262 1439 aa34.78■■■■□ 3.16
SHISA4-203ENST00000481699 ZFYVE16Q7Z3T8 1539 aa34.76■■■■□ 3.16
SHISA4-203ENST00000481699 INO80Q9ULG1 1556 aaPredicted RBP34.75■■■■□ 3.15
SHISA4-203ENST00000481699 ADGBQ8N7X0 1667 aa34.71■■■■□ 3.15
SHISA4-203ENST00000481699 RRP7BPQ9NSQ0 103 aa34.71■■■■□ 3.15
SHISA4-203ENST00000481699 ROCK1Q13464 1354 aa34.71■■■■□ 3.15
SHISA4-203ENST00000481699 ADGRL2O95490 1459 aa34.7■■■■□ 3.15
SHISA4-203ENST00000481699 KIDINS220Q9ULH0 1771 aa34.69■■■■□ 3.14
SHISA4-203ENST00000481699 NCOA1Q15788 1441 aa34.67■■■■□ 3.14
SHISA4-203ENST00000481699 YEATS2Q9ULM3 1422 aa34.67■■■■□ 3.14
SHISA4-203ENST00000481699 KIF15Q9NS87 1388 aa34.67■■■■□ 3.14
SHISA4-203ENST00000481699 PLXNC1O60486 1568 aa34.66■■■■□ 3.14
SHISA4-203ENST00000481699 ARHGEF40Q8TER5 1519 aa34.63■■■■□ 3.13
SHISA4-203ENST00000481699 ABCA6Q8N139 1617 aa34.62■■■■□ 3.13
SHISA4-203ENST00000481699 PCGF6Q9BYE7 350 aa34.61■■■■□ 3.13
SHISA4-203ENST00000481699 DIP2CQ9Y2E4 1556 aa34.61■■■■□ 3.13
SHISA4-203ENST00000481699 ATP10AO60312 1499 aa34.6■■■■□ 3.13
SHISA4-203ENST00000481699 A2MP01023 1474 aa34.58■■■■□ 3.13
SHISA4-203ENST00000481699 DUOX2Q9NRD8 1548 aa34.57■■■■□ 3.12
SHISA4-203ENST00000481699 HFM1A2PYH4 1435 aa34.55■■■■□ 3.12
SHISA4-203ENST00000481699 DHX29Q7Z478 1369 aaKnown RBP34.55■■■■□ 3.12
SHISA4-203ENST00000481699 NAIPQ13075 1403 aa34.51■■■■□ 3.12
SHISA4-203ENST00000481699 ANKRD50Q9ULJ7 1429 aa34.5■■■■□ 3.11
SHISA4-203ENST00000481699 ERBINQ96RT1 1412 aa34.49■■■■□ 3.11
SHISA4-203ENST00000481699 ARID4BQ4LE39 1312 aaPredicted RBP34.48■■■■□ 3.11
SHISA4-203ENST00000481699 SETD5Q9C0A6 1442 aa34.47■■■■□ 3.11
SHISA4-203ENST00000481699 GCC2Q8IWJ2 1684 aa34.47■■■■□ 3.11
SHISA4-203ENST00000481699 REREQ9P2R6 1566 aa34.46■■■■□ 3.11
SHISA4-203ENST00000481699 KIF3BO15066 747 aa34.43■■■■□ 3.1
SHISA4-203ENST00000481699 EIF2AK4Q9P2K8 1649 aaKnown RBP34.38■■■■□ 3.09
SHISA4-203ENST00000481699 AGLP35573 1532 aa34.37■■■■□ 3.09
SHISA4-203ENST00000481699 RAB3GAP2Q9H2M9 1393 aa34.36■■■■□ 3.09
SHISA4-203ENST00000481699 ACIN1Q9UKV3 1341 aaKnown RBP34.32■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms