RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 BCORL1Q5H9F3 1711 aa17.01■□□□□ 0.31
SSBP1-210ENST00000481508 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
SSBP1-210ENST00000481508 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
SSBP1-210ENST00000481508 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
SSBP1-210ENST00000481508 KIF14Q15058 1648 aa16.99■□□□□ 0.31
SSBP1-210ENST00000481508 TTC37Q6PGP7 1564 aa16.99■□□□□ 0.31
SSBP1-210ENST00000481508 SPATA31D1Q6ZQQ2 1576 aa16.99■□□□□ 0.31
SSBP1-210ENST00000481508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSBP1-210ENST00000481508 CCDC18Q5T9S5 1454 aa16.98■□□□□ 0.31
SSBP1-210ENST00000481508 CD109Q6YHK3 1445 aa16.96■□□□□ 0.3
SSBP1-210ENST00000481508 PLEKHD1A6NEE1 506 aa16.95■□□□□ 0.3
SSBP1-210ENST00000481508 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
SSBP1-210ENST00000481508 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
SSBP1-210ENST00000481508 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
SSBP1-210ENST00000481508 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
SSBP1-210ENST00000481508 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
SSBP1-210ENST00000481508 HSPA2P54652 639 aa16.86■□□□□ 0.29
SSBP1-210ENST00000481508 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-210ENST00000481508 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
SSBP1-210ENST00000481508 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
SSBP1-210ENST00000481508 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
SSBP1-210ENST00000481508 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
SSBP1-210ENST00000481508 ARAP3Q8WWN8 1544 aa16.85■□□□□ 0.29
SSBP1-210ENST00000481508 CERKQ8TCT0 537 aa16.84■□□□□ 0.29
SSBP1-210ENST00000481508 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
SSBP1-210ENST00000481508 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
SSBP1-210ENST00000481508 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
SSBP1-210ENST00000481508 FANCAO15360 1455 aa16.8■□□□□ 0.28
SSBP1-210ENST00000481508 NEO1Q92859 1461 aa16.8■□□□□ 0.28
SSBP1-210ENST00000481508 PLCH2O75038 1416 aa16.8■□□□□ 0.28
SSBP1-210ENST00000481508 FER1L4A9Z1Z3 1794 aa16.79■□□□□ 0.28
SSBP1-210ENST00000481508 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
SSBP1-210ENST00000481508 ARHGEF40Q8TER5 1519 aa16.79■□□□□ 0.28
SSBP1-210ENST00000481508 RICTORQ6R327 1708 aa16.78■□□□□ 0.28
SSBP1-210ENST00000481508 MAP3K1Q13233 1512 aa16.77■□□□□ 0.28
SSBP1-210ENST00000481508 SUPT6HQ7KZ85 1726 aaKnown RBP16.77■□□□□ 0.28
SSBP1-210ENST00000481508 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
SSBP1-210ENST00000481508 STRCQ7RTU9 1775 aa16.77■□□□□ 0.27
SSBP1-210ENST00000481508 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
SSBP1-210ENST00000481508 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
SSBP1-210ENST00000481508 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
SSBP1-210ENST00000481508 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
SSBP1-210ENST00000481508 PREX1Q8TCU6 1659 aa16.73■□□□□ 0.27
SSBP1-210ENST00000481508 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
SSBP1-210ENST00000481508 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
SSBP1-210ENST00000481508 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
SSBP1-210ENST00000481508 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
SSBP1-210ENST00000481508 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
SSBP1-210ENST00000481508 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
SSBP1-210ENST00000481508 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
SSBP1-210ENST00000481508 ABCC1P33527 1531 aa16.7■□□□□ 0.26
SSBP1-210ENST00000481508 ARHGEF12Q9NZN5 1544 aa16.7■□□□□ 0.26
SSBP1-210ENST00000481508 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
SSBP1-210ENST00000481508 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
SSBP1-210ENST00000481508 SCAPERQ9BY12 1400 aa16.69■□□□□ 0.26
SSBP1-210ENST00000481508 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
SSBP1-210ENST00000481508 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
SSBP1-210ENST00000481508 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
SSBP1-210ENST00000481508 ZMYM4Q5VZL5 1548 aa16.65■□□□□ 0.26
SSBP1-210ENST00000481508 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
SSBP1-210ENST00000481508 KDM5CP41229 1560 aa16.64■□□□□ 0.25
SSBP1-210ENST00000481508 TRAPPC8Q9Y2L5 1435 aa16.63■□□□□ 0.25
SSBP1-210ENST00000481508 ZNF777Q9ULD5 760 aaPredicted RBP16.63■□□□□ 0.25
SSBP1-210ENST00000481508 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
SSBP1-210ENST00000481508 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
SSBP1-210ENST00000481508 YEATS2Q9ULM3 1422 aa16.61■□□□□ 0.25
SSBP1-210ENST00000481508 APLP2Q06481 763 aa16.6■□□□□ 0.25
SSBP1-210ENST00000481508 CAMSAP2Q08AD1 1489 aa16.6■□□□□ 0.25
SSBP1-210ENST00000481508 ZFYVE16Q7Z3T8 1539 aa16.6■□□□□ 0.25
SSBP1-210ENST00000481508 AFAP1Q8N556 730 aa16.59■□□□□ 0.25
SSBP1-210ENST00000481508 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
SSBP1-210ENST00000481508 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
SSBP1-210ENST00000481508 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
SSBP1-210ENST00000481508 MYOM3Q5VTT5 1437 aa16.57■□□□□ 0.24
SSBP1-210ENST00000481508 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
SSBP1-210ENST00000481508 MBD5Q9P267 1494 aa16.56■□□□□ 0.24
SSBP1-210ENST00000481508 DIP2CQ9Y2E4 1556 aa16.55■□□□□ 0.24
SSBP1-210ENST00000481508 PLEKHH2Q8IVE3 1493 aa16.55■□□□□ 0.24
SSBP1-210ENST00000481508 KIAA1107Q9UPP5 1409 aa16.55■□□□□ 0.24
SSBP1-210ENST00000481508 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
SSBP1-210ENST00000481508 LTBP4Q8N2S1 1624 aa16.54■□□□□ 0.24
SSBP1-210ENST00000481508 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
SSBP1-210ENST00000481508 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
SSBP1-210ENST00000481508 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
SSBP1-210ENST00000481508 MLECQ14165 292 aa16.52■□□□□ 0.24
SSBP1-210ENST00000481508 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
SSBP1-210ENST00000481508 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
SSBP1-210ENST00000481508 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
SSBP1-210ENST00000481508 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
SSBP1-210ENST00000481508 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
SSBP1-210ENST00000481508 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
SSBP1-210ENST00000481508 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
SSBP1-210ENST00000481508 CROCC2H7BZ55 1655 aa16.48■□□□□ 0.23
SSBP1-210ENST00000481508 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
SSBP1-210ENST00000481508 ATP10AO60312 1499 aa16.48■□□□□ 0.23
SSBP1-210ENST00000481508 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
SSBP1-210ENST00000481508 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
SSBP1-210ENST00000481508 C3P01024 1663 aa16.47■□□□□ 0.23
SSBP1-210ENST00000481508 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-210ENST00000481508 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms