RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
PDCD4-206ENST00000481353 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
PDCD4-206ENST00000481353 TMEM121BQ9BXQ6 578 aaPredicted RBP16.24■□□□□ 0.19
PDCD4-206ENST00000481353 TMEM92Q6UXU6 159 aa16.22■□□□□ 0.19
PDCD4-206ENST00000481353 MICALL2Q8IY33 904 aa16.22■□□□□ 0.19
PDCD4-206ENST00000481353 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
PDCD4-206ENST00000481353 PPP1R37O75864 691 aa16.2■□□□□ 0.18
PDCD4-206ENST00000481353 C3orf67Q6ZVT6 689 aa16.2■□□□□ 0.18
PDCD4-206ENST00000481353 NLRP6P59044 892 aa16.19■□□□□ 0.18
PDCD4-206ENST00000481353 FAM163AQ96GL9 167 aaPredicted RBP16.17■□□□□ 0.18
PDCD4-206ENST00000481353 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
PDCD4-206ENST00000481353 G3V3G9 751 aa16.06■□□□□ 0.16
PDCD4-206ENST00000481353 ST18O60284 1047 aa16.05■□□□□ 0.16
PDCD4-206ENST00000481353 POTEMA6NI47 508 aa16.02■□□□□ 0.16
PDCD4-206ENST00000481353 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
PDCD4-206ENST00000481353 HOXB3P14651 431 aaPredicted RBP16■□□□□ 0.15
PDCD4-206ENST00000481353 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
PDCD4-206ENST00000481353 WDR70Q9NW82 654 aa15.98■□□□□ 0.15
PDCD4-206ENST00000481353 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.15
PDCD4-206ENST00000481353 KIF3CO14782 793 aa15.91■□□□□ 0.14
PDCD4-206ENST00000481353 MARVELD3Q96A59 401 aa15.91■□□□□ 0.14
PDCD4-206ENST00000481353 C2orf72A6NCS6 295 aa15.9■□□□□ 0.14
PDCD4-206ENST00000481353 SNPHO15079 494 aa15.83■□□□□ 0.12
PDCD4-206ENST00000481353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.83■□□□□ 0.12
PDCD4-206ENST00000481353 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
PDCD4-206ENST00000481353 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
PDCD4-206ENST00000481353 LMOD2Q6P5Q4 547 aa15.81■□□□□ 0.12
PDCD4-206ENST00000481353 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
PDCD4-206ENST00000481353 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
PDCD4-206ENST00000481353 KHSRPQ92945 711 aaKnown RBP eCLIP15.76■□□□□ 0.11
PDCD4-206ENST00000481353 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
PDCD4-206ENST00000481353 GTF3C3Q9Y5Q9 886 aa15.73■□□□□ 0.11
PDCD4-206ENST00000481353 E2F4Q16254 413 aa15.72■□□□□ 0.11
PDCD4-206ENST00000481353 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
PDCD4-206ENST00000481353 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
PDCD4-206ENST00000481353 GPR153Q6NV75 609 aa15.71■□□□□ 0.11
PDCD4-206ENST00000481353 TMC2Q8TDI7 906 aa15.71■□□□□ 0.11
PDCD4-206ENST00000481353 HOXB1P14653 301 aaPredicted RBP15.69■□□□□ 0.1
PDCD4-206ENST00000481353 EMP3P54852 163 aa15.69■□□□□ 0.1
PDCD4-206ENST00000481353 DSG2Q14126 1118 aa15.69■□□□□ 0.1
PDCD4-206ENST00000481353 ARSIQ5FYB1 569 aa15.68■□□□□ 0.1
PDCD4-206ENST00000481353 ZNF710Q8N1W2 664 aa15.68■□□□□ 0.1
PDCD4-206ENST00000481353 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
PDCD4-206ENST00000481353 CRISPLD2Q9H0B8 497 aa15.66■□□□□ 0.1
PDCD4-206ENST00000481353 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
PDCD4-206ENST00000481353 FAM205CA6NFA0 338 aa15.65■□□□□ 0.1
PDCD4-206ENST00000481353 CDAN1Q8IWY9 1227 aa15.65■□□□□ 0.1
PDCD4-206ENST00000481353 HS3ST6Q96QI5 342 aa15.63■□□□□ 0.09
PDCD4-206ENST00000481353 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
PDCD4-206ENST00000481353 PLPP6Q8IY26 295 aa15.62■□□□□ 0.09
PDCD4-206ENST00000481353 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
PDCD4-206ENST00000481353 FOXK1P85037 733 aa15.61■□□□□ 0.09
PDCD4-206ENST00000481353 NISCHQ9Y2I1 1504 aa15.59■□□□□ 0.09
PDCD4-206ENST00000481353 SEMA3EO15041 775 aa15.57■□□□□ 0.08
PDCD4-206ENST00000481353 MFSD10Q14728 455 aa15.57■□□□□ 0.08
PDCD4-206ENST00000481353 ZC3H15Q8WU90 426 aaKnown RBP15.57■□□□□ 0.08
PDCD4-206ENST00000481353 PDE4AP27815 886 aa15.56■□□□□ 0.08
PDCD4-206ENST00000481353 PCDHGA4Q9Y5G9 962 aa15.56■□□□□ 0.08
PDCD4-206ENST00000481353 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
PDCD4-206ENST00000481353 ZSWIM6Q9HCJ5 1215 aa15.55■□□□□ 0.08
PDCD4-206ENST00000481353 NUDT7P0C024 238 aa15.54■□□□□ 0.08
PDCD4-206ENST00000481353 ARIH1Q9Y4X5 557 aaPredicted RBP15.54■□□□□ 0.08
PDCD4-206ENST00000481353 SLC34A2O95436 690 aa15.53■□□□□ 0.08
PDCD4-206ENST00000481353 VARS2Q5ST30 1063 aaKnown RBP15.52■□□□□ 0.08
PDCD4-206ENST00000481353 LARP6Q9BRS8 491 aaKnown RBP15.52■□□□□ 0.08
PDCD4-206ENST00000481353 KRTAP3-3Q9BYR6 98 aa15.52■□□□□ 0.08
PDCD4-206ENST00000481353 KRTAP3-2Q9BYR7 98 aa15.52■□□□□ 0.08
PDCD4-206ENST00000481353 PPP1R15BQ5SWA1 713 aa15.51■□□□□ 0.07
PDCD4-206ENST00000481353 ERBB3P21860 1342 aa15.5■□□□□ 0.07
PDCD4-206ENST00000481353 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
PDCD4-206ENST00000481353 KDM4FA0A1W2PPD8 638 aa15.49■□□□□ 0.07
PDCD4-206ENST00000481353 PLSCR2Q9NRY7 297 aa15.48■□□□□ 0.07
PDCD4-206ENST00000481353 SMYD5Q6GMV2 418 aa15.47■□□□□ 0.07
PDCD4-206ENST00000481353 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
PDCD4-206ENST00000481353 PTCD2Q8WV60 388 aaKnown RBP15.46■□□□□ 0.07
PDCD4-206ENST00000481353 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDCD4-206ENST00000481353 CAMK2BQ13554 666 aa15.45■□□□□ 0.06
PDCD4-206ENST00000481353 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
PDCD4-206ENST00000481353 LHX6Q9UPM6 363 aa15.44■□□□□ 0.06
PDCD4-206ENST00000481353 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
PDCD4-206ENST00000481353 OXER1Q8TDS5 423 aa15.41■□□□□ 0.06
PDCD4-206ENST00000481353 SLC24A3Q9HC58 644 aa15.4■□□□□ 0.06
PDCD4-206ENST00000481353 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
PDCD4-206ENST00000481353 ZMYND10O75800 440 aa15.39■□□□□ 0.05
PDCD4-206ENST00000481353 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
PDCD4-206ENST00000481353 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
PDCD4-206ENST00000481353 ZNF687Q8N1G0 1237 aa15.32■□□□□ 0.04
PDCD4-206ENST00000481353 BARGINQ6ZT62 677 aa15.3■□□□□ 0.04
PDCD4-206ENST00000481353 SPNS2Q8IVW8 549 aa15.29■□□□□ 0.04
PDCD4-206ENST00000481353 AXIN2Q9Y2T1 843 aa15.28■□□□□ 0.04
PDCD4-206ENST00000481353 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
PDCD4-206ENST00000481353 MLLT3P42568 568 aaPredicted RBP15.21■□□□□ 0.03
PDCD4-206ENST00000481353 EVI5O60447 810 aa15.2■□□□□ 0.02
PDCD4-206ENST00000481353 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
PDCD4-206ENST00000481353 DPYSL4O14531 572 aa15.19■□□□□ 0.02
PDCD4-206ENST00000481353 TBC1D12O60347 775 aa15.19■□□□□ 0.02
PDCD4-206ENST00000481353 GPIHBP1Q8IV16 184 aa15.19■□□□□ 0.02
PDCD4-206ENST00000481353 MMRN1Q13201 1228 aa15.17■□□□□ 0.02
PDCD4-206ENST00000481353 AK7Q96M32 723 aa15.17■□□□□ 0.02
PDCD4-206ENST00000481353 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms