RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 G3V3G9 751 aa14.75□□□□□ -0.05
CBX3-206ENST00000481057 NCKAP5LQ9HCH0 1330 aa14.71□□□□□ -0.05
CBX3-206ENST00000481057 CRISPLD2Q9H0B8 497 aa14.71□□□□□ -0.05
CBX3-206ENST00000481057 PDE4AP27815 886 aa14.66□□□□□ -0.06
CBX3-206ENST00000481057 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
CBX3-206ENST00000481057 MFSD10Q14728 455 aa14.63□□□□□ -0.07
CBX3-206ENST00000481057 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
CBX3-206ENST00000481057 WDR70Q9NW82 654 aa14.63□□□□□ -0.07
CBX3-206ENST00000481057 GPHNQ9NQX3 736 aaPredicted RBP14.62□□□□□ -0.07
CBX3-206ENST00000481057 CUX2O14529 1486 aa14.62□□□□□ -0.07
CBX3-206ENST00000481057 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
CBX3-206ENST00000481057 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
CBX3-206ENST00000481057 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
CBX3-206ENST00000481057 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
CBX3-206ENST00000481057 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
CBX3-206ENST00000481057 KIF3CO14782 793 aa14.58□□□□□ -0.08
CBX3-206ENST00000481057 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
CBX3-206ENST00000481057 C2orf72A6NCS6 295 aa14.56□□□□□ -0.08
CBX3-206ENST00000481057 PPP1R15BQ5SWA1 713 aa14.54□□□□□ -0.08
CBX3-206ENST00000481057 DSG2Q14126 1118 aa14.53□□□□□ -0.08
CBX3-206ENST00000481057 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.53□□□□□ -0.08
CBX3-206ENST00000481057 FOXK1P85037 733 aa14.52□□□□□ -0.09
CBX3-206ENST00000481057 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
CBX3-206ENST00000481057 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
CBX3-206ENST00000481057 E2F4Q16254 413 aa14.5□□□□□ -0.09
CBX3-206ENST00000481057 BICRAQ9NZM4 1560 aa14.48□□□□□ -0.09
CBX3-206ENST00000481057 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
CBX3-206ENST00000481057 CAMK2BQ13554 666 aa14.47□□□□□ -0.09
CBX3-206ENST00000481057 PLPP6Q8IY26 295 aa14.46□□□□□ -0.09
CBX3-206ENST00000481057 MAMSTRQ6ZN01 415 aa14.45□□□□□ -0.1
CBX3-206ENST00000481057 SCUBE2Q9NQ36 999 aa14.44□□□□□ -0.1
CBX3-206ENST00000481057 BCANQ96GW7 911 aa14.41□□□□□ -0.1
CBX3-206ENST00000481057 NACADO15069 1562 aa14.4□□□□□ -0.1
CBX3-206ENST00000481057 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
CBX3-206ENST00000481057 EMILIN3Q9NT22 766 aa14.37□□□□□ -0.11
CBX3-206ENST00000481057 ARIH1Q9Y4X5 557 aaPredicted RBP14.37□□□□□ -0.11
CBX3-206ENST00000481057 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
CBX3-206ENST00000481057 LHX8Q68G74 356 aa14.35□□□□□ -0.11
CBX3-206ENST00000481057 NBR1Q14596 966 aa14.34□□□□□ -0.11
CBX3-206ENST00000481057 OTUD5Q96G74 571 aa14.31□□□□□ -0.12
CBX3-206ENST00000481057 DPYSL4O14531 572 aa14.28□□□□□ -0.12
CBX3-206ENST00000481057 SLC34A2O95436 690 aa14.28□□□□□ -0.12
CBX3-206ENST00000481057 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
CBX3-206ENST00000481057 UPF1Q92900 1129 aaKnown RBP eCLIP14.27□□□□□ -0.13
CBX3-206ENST00000481057 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
CBX3-206ENST00000481057 PTCD2Q8WV60 388 aaKnown RBP14.24□□□□□ -0.13
CBX3-206ENST00000481057 PDIA6Q15084 440 aa14.22□□□□□ -0.13
CBX3-206ENST00000481057 HOXB3P14651 431 aaPredicted RBP14.21□□□□□ -0.13
CBX3-206ENST00000481057 MAP3K9P80192 1104 aa14.21□□□□□ -0.13
CBX3-206ENST00000481057 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
CBX3-206ENST00000481057 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
CBX3-206ENST00000481057 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
CBX3-206ENST00000481057 SEMA3EO15041 775 aa14.18□□□□□ -0.14
CBX3-206ENST00000481057 TBC1D12O60347 775 aa14.16□□□□□ -0.14
CBX3-206ENST00000481057 PCDHGA4Q9Y5G9 962 aa14.16□□□□□ -0.14
CBX3-206ENST00000481057 TESPA1A2RU30 521 aaPredicted RBP14.15□□□□□ -0.14
CBX3-206ENST00000481057 SNPHO15079 494 aa14.13□□□□□ -0.15
CBX3-206ENST00000481057 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
CBX3-206ENST00000481057 EVI5O60447 810 aa14.12□□□□□ -0.15
CBX3-206ENST00000481057 ZSWIM6Q9HCJ5 1215 aa14.12□□□□□ -0.15
CBX3-206ENST00000481057 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
CBX3-206ENST00000481057 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
CBX3-206ENST00000481057 ZNF710Q8N1W2 664 aa14.09□□□□□ -0.15
CBX3-206ENST00000481057 MLLT3P42568 568 aaPredicted RBP14.08□□□□□ -0.16
CBX3-206ENST00000481057 KDM4FA0A1W2PPD8 638 aa14.07□□□□□ -0.16
CBX3-206ENST00000481057 GPR153Q6NV75 609 aa14.07□□□□□ -0.16
CBX3-206ENST00000481057 ARSIQ5FYB1 569 aa14.06□□□□□ -0.16
CBX3-206ENST00000481057 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
CBX3-206ENST00000481057 PTGER2P43116 358 aa14.05□□□□□ -0.16
CBX3-206ENST00000481057 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.169e-6■□□□□ 10.6
CBX3-206ENST00000481057 TULP1O00294 542 aaPredicted RBP14.03□□□□□ -0.16
CBX3-206ENST00000481057 NUDT7P0C024 238 aa14.02□□□□□ -0.17
CBX3-206ENST00000481057 SMYD5Q6GMV2 418 aa14.02□□□□□ -0.17
CBX3-206ENST00000481057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.01□□□□□ -0.17
CBX3-206ENST00000481057 HOXB1P14653 301 aaPredicted RBP14□□□□□ -0.17
CBX3-206ENST00000481057 LMOD2Q6P5Q4 547 aa14□□□□□ -0.17
CBX3-206ENST00000481057 DDX12PQ92771 950 aa14□□□□□ -0.17
CBX3-206ENST00000481057 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
CBX3-206ENST00000481057 PHF14O94880 888 aa13.93□□□□□ -0.18
CBX3-206ENST00000481057 OSBPP22059 807 aa13.93□□□□□ -0.18
CBX3-206ENST00000481057 JPH4Q96JJ6 628 aa13.93□□□□□ -0.18
CBX3-206ENST00000481057 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
CBX3-206ENST00000481057 ST18O60284 1047 aa13.91□□□□□ -0.18
CBX3-206ENST00000481057 FOSBP53539 338 aa13.91□□□□□ -0.18
CBX3-206ENST00000481057 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
CBX3-206ENST00000481057 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
CBX3-206ENST00000481057 EPAS1Q99814 870 aa13.9□□□□□ -0.18
CBX3-206ENST00000481057 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
CBX3-206ENST00000481057 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
CBX3-206ENST00000481057 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
CBX3-206ENST00000481057 ZNF454Q8N9F8 522 aa13.87□□□□□ -0.19
CBX3-206ENST00000481057 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
CBX3-206ENST00000481057 FBXW7Q969H0 707 aa13.85□□□□□ -0.19
CBX3-206ENST00000481057 FAM163AQ96GL9 167 aaPredicted RBP13.85□□□□□ -0.19
CBX3-206ENST00000481057 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
CBX3-206ENST00000481057 GPIHBP1Q8IV16 184 aa13.83□□□□□ -0.2
CBX3-206ENST00000481057 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
CBX3-206ENST00000481057 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
CBX3-206ENST00000481057 PRKCSHP14314 528 aaPredicted RBP13.81□□□□□ -0.2
CBX3-206ENST00000481057 PPP4R3BQ5MIZ7 849 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms