RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 RICTORQ6R327 1708 aa32.04■■■□□ 2.72
VPS36-204ENST00000480923 VPS8Q8N3P4 1428 aa32.03■■■□□ 2.72
VPS36-204ENST00000480923 POGZQ7Z3K3 1410 aa32.01■■■□□ 2.72
VPS36-204ENST00000480923 PREX2Q70Z35 1606 aa32■■■□□ 2.71
VPS36-204ENST00000480923 CDC42BPBQ9Y5S2 1711 aa31.97■■■□□ 2.71
VPS36-204ENST00000480923 ZMYM4Q5VZL5 1548 aa31.97■■■□□ 2.71
VPS36-204ENST00000480923 EHBP1L1Q8N3D4 1523 aa31.95■■■□□ 2.71
VPS36-204ENST00000480923 ARHGEF40Q8TER5 1519 aa31.95■■■□□ 2.7
VPS36-204ENST00000480923 CCNB3Q8WWL7 1395 aa31.94■■■□□ 2.7
VPS36-204ENST00000480923 CDC42BPAQ5VT25 1732 aa31.93■■■□□ 2.7
VPS36-204ENST00000480923 ZFYVE16Q7Z3T8 1539 aa31.92■■■□□ 2.7
VPS36-204ENST00000480923 GPATCH8Q9UKJ3 1502 aaKnown RBP31.92■■■□□ 2.7
VPS36-204ENST00000480923 ZNF777Q9ULD5 760 aaPredicted RBP31.92■■■□□ 2.7
VPS36-204ENST00000480923 ARID4BQ4LE39 1312 aaPredicted RBP31.92■■■□□ 2.7
VPS36-204ENST00000480923 MAGI2Q86UL8 1455 aa31.91■■■□□ 2.7
VPS36-204ENST00000480923 ZNF518AQ6AHZ1 1483 aa31.91■■■□□ 2.7
VPS36-204ENST00000480923 YEATS2Q9ULM3 1422 aa31.9■■■□□ 2.7
VPS36-204ENST00000480923 AFAP1Q8N556 730 aa31.89■■■□□ 2.7
VPS36-204ENST00000480923 TIAM1Q13009 1591 aa31.88■■■□□ 2.69
VPS36-204ENST00000480923 ABCC1P33527 1531 aa31.87■■■□□ 2.69
VPS36-204ENST00000480923 CFDP1Q9UEE9 299 aaPredicted RBP31.87■■■□□ 2.69
VPS36-204ENST00000480923 MYT1LQ9UL68 1186 aa31.85■■■□□ 2.69
VPS36-204ENST00000480923 ARHGEF12Q9NZN5 1544 aa31.84■■■□□ 2.69
VPS36-204ENST00000480923 TRAPPC8Q9Y2L5 1435 aa31.82■■■□□ 2.68
VPS36-204ENST00000480923 KDM5CP41229 1560 aa31.81■■■□□ 2.68
VPS36-204ENST00000480923 SAMD9LQ8IVG5 1584 aa31.8■■■□□ 2.68
VPS36-204ENST00000480923 ITSN2Q9NZM3 1697 aa31.79■■■□□ 2.68
VPS36-204ENST00000480923 ATP10AO60312 1499 aa31.77■■■□□ 2.68
VPS36-204ENST00000480923 NCOA2Q15596 1464 aa31.77■■■□□ 2.68
VPS36-204ENST00000480923 LRRC9Q6ZRR7 1453 aa31.77■■■□□ 2.68
VPS36-204ENST00000480923 SUPT6HQ7KZ85 1726 aaKnown RBP31.76■■■□□ 2.67
VPS36-204ENST00000480923 SYCP2Q9BX26 1530 aa31.75■■■□□ 2.67
VPS36-204ENST00000480923 HNRNPMP52272 730 aaKnown RBP eCLIP31.75■■■□□ 2.67
VPS36-204ENST00000480923 HECW2Q9P2P5 1572 aa31.74■■■□□ 2.67
VPS36-204ENST00000480923 PLEKHH2Q8IVE3 1493 aa31.74■■■□□ 2.67
VPS36-204ENST00000480923 MAP3K1Q13233 1512 aa31.74■■■□□ 2.67
VPS36-204ENST00000480923 C9orf84Q5VXU9 1444 aa31.74■■■□□ 2.67
VPS36-204ENST00000480923 APLP2Q06481 763 aa31.73■■■□□ 2.67
VPS36-204ENST00000480923 MLH3Q9UHC1 1453 aa31.72■■■□□ 2.67
VPS36-204ENST00000480923 BCORL1Q5H9F3 1711 aa31.72■■■□□ 2.67
VPS36-204ENST00000480923 KIAA1107Q9UPP5 1409 aa31.72■■■□□ 2.67
VPS36-204ENST00000480923 ADAMTSL3P82987 1691 aa31.71■■■□□ 2.67
VPS36-204ENST00000480923 KANK4Q5T7N3 995 aaPredicted RBP31.71■■■□□ 2.67
VPS36-204ENST00000480923 ZNF644Q9H582 1327 aaPredicted RBP31.69■■■□□ 2.66
VPS36-204ENST00000480923 MLECQ14165 292 aa31.67■■■□□ 2.66
VPS36-204ENST00000480923 SIGLEC1Q9BZZ2 1709 aa31.66■■■□□ 2.66
VPS36-204ENST00000480923 DIP2CQ9Y2E4 1556 aa31.66■■■□□ 2.66
VPS36-204ENST00000480923 SPAG9O60271 1321 aaKnown RBP31.65■■■□□ 2.66
VPS36-204ENST00000480923 MADDQ8WXG6 1647 aa31.64■■■□□ 2.65
VPS36-204ENST00000480923 ABCA6Q8N139 1617 aa31.63■■■□□ 2.65
VPS36-204ENST00000480923 PTPRMP28827 1452 aa31.62■■■□□ 2.65
VPS36-204ENST00000480923 KIDINS220Q9ULH0 1771 aa31.58■■■□□ 2.65
VPS36-204ENST00000480923 REREQ9P2R6 1566 aa31.56■■■□□ 2.64
VPS36-204ENST00000480923 CAMSAP2Q08AD1 1489 aa31.56■■■□□ 2.64
VPS36-204ENST00000480923 MBD5Q9P267 1494 aa31.56■■■□□ 2.64
VPS36-204ENST00000480923 ATP7AQ04656 1500 aa31.54■■■□□ 2.64
VPS36-204ENST00000480923 RIMS1Q86UR5 1692 aaKnown RBP31.53■■■□□ 2.64
VPS36-204ENST00000480923 INO80Q9ULG1 1556 aaPredicted RBP31.5■■■□□ 2.63
VPS36-204ENST00000480923 PLPPR3Q6T4P5 718 aa31.49■■■□□ 2.63
VPS36-204ENST00000480923 MYOM3Q5VTT5 1437 aa31.49■■■□□ 2.63
VPS36-204ENST00000480923 AGLP35573 1532 aa31.48■■■□□ 2.63
VPS36-204ENST00000480923 CCDC141Q6ZP82 1450 aa31.47■■■□□ 2.63
VPS36-204ENST00000480923 RSPH4AQ5TD94 716 aa31.47■■■□□ 2.63
VPS36-204ENST00000480923 FER1L4A9Z1Z3 1794 aa31.45■■■□□ 2.62
VPS36-204ENST00000480923 MIA2Q96PC5 1412 aa31.44■■■□□ 2.62
VPS36-204ENST00000480923 RTEL1-TNFRSF6BF6WH68 1400 aa31.42■■■□□ 2.62
VPS36-204ENST00000480923 A2MP01023 1474 aa31.42■■■□□ 2.62
VPS36-204ENST00000480923 ARHGEF5Q12774 1597 aa31.39■■■□□ 2.61
VPS36-204ENST00000480923 TSPY4P0CV99 314 aa31.38■■■□□ 2.61
VPS36-204ENST00000480923 TSPY10P0CW01 314 aa31.38■■■□□ 2.61
VPS36-204ENST00000480923 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
VPS36-204ENST00000480923 PLXNC1O60486 1568 aa31.34■■■□□ 2.61
VPS36-204ENST00000480923 ADGBQ8N7X0 1667 aa31.32■■■□□ 2.6
VPS36-204ENST00000480923 CEBPAP49715 358 aaPredicted RBP31.32■■■□□ 2.6
VPS36-204ENST00000480923 DHX29Q7Z478 1369 aaKnown RBP31.3■■■□□ 2.6
VPS36-204ENST00000480923 FGD6Q6ZV73 1430 aa31.28■■■□□ 2.6
VPS36-204ENST00000480923 GGT6Q6P531 493 aa31.27■■■□□ 2.6
VPS36-204ENST00000480923 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
VPS36-204ENST00000480923 CNTLNQ9NXG0 1405 aa31.25■■■□□ 2.59
VPS36-204ENST00000480923 MAST1Q9Y2H9 1570 aa31.22■■■□□ 2.59
VPS36-204ENST00000480923 LMTK3Q96Q04 1460 aa31.21■■■□□ 2.59
VPS36-204ENST00000480923 TCOF1Q13428 1488 aaKnown RBP31.21■■■□□ 2.59
VPS36-204ENST00000480923 KIF3BO15066 747 aa31.2■■■□□ 2.59
VPS36-204ENST00000480923 ABCC5O15440 1437 aa31.17■■■□□ 2.58
VPS36-204ENST00000480923 PPP6R1Q9UPN7 881 aa31.16■■■□□ 2.58
VPS36-204ENST00000480923 C3P01024 1663 aa31.15■■■□□ 2.58
VPS36-204ENST00000480923 DAPK1P53355 1430 aa31.15■■■□□ 2.58
VPS36-204ENST00000480923 HSPA2P54652 639 aa31.13■■■□□ 2.57
VPS36-204ENST00000480923 FAM50AQ14320 339 aaKnown RBP31.13■■■□□ 2.57
VPS36-204ENST00000480923 PPARGC1BQ86YN6 1023 aaKnown RBP31.13■■■□□ 2.57
VPS36-204ENST00000480923 ZMYM3Q14202 1370 aa31.13■■■□□ 2.57
VPS36-204ENST00000480923 SHANK2Q9UPX8 1470 aa31.13■■■□□ 2.57
VPS36-204ENST00000480923 MROH2AA6NES4 1674 aa31.1■■■□□ 2.57
VPS36-204ENST00000480923 CLTCQ00610 1675 aaKnown RBP31.1■■■□□ 2.57
VPS36-204ENST00000480923 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
VPS36-204ENST00000480923 CROCC2H7BZ55 1655 aa31.09■■■□□ 2.57
VPS36-204ENST00000480923 UHRF1BP1Q6BDS2 1440 aa31.07■■■□□ 2.57
VPS36-204ENST00000480923 PREX1Q8TCU6 1659 aa31.07■■■□□ 2.56
VPS36-204ENST00000480923 RRP7BPQ9NSQ0 103 aa31.06■■■□□ 2.56
VPS36-204ENST00000480923 CHIC2Q9UKJ5 165 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms