RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
CACNA1C-225ENST00000480911 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
CACNA1C-225ENST00000480911 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-225ENST00000480911 CDCA8Q53HL2 280 aa12.02□□□□□ -0.49
CACNA1C-225ENST00000480911 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
CACNA1C-225ENST00000480911 PLCB2Q00722 1185 aa12□□□□□ -0.49
CACNA1C-225ENST00000480911 USP35Q9P2H5 1018 aa11.99□□□□□ -0.49
CACNA1C-225ENST00000480911 PRXQ9BXM0 1461 aa11.99□□□□□ -0.49
CACNA1C-225ENST00000480911 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
CACNA1C-225ENST00000480911 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
CACNA1C-225ENST00000480911 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
CACNA1C-225ENST00000480911 JPH4Q96JJ6 628 aa11.98□□□□□ -0.49
CACNA1C-225ENST00000480911 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-225ENST00000480911 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
CACNA1C-225ENST00000480911 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
CACNA1C-225ENST00000480911 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
CACNA1C-225ENST00000480911 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
CACNA1C-225ENST00000480911 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
CACNA1C-225ENST00000480911 NCAPD3P42695 1498 aa11.96□□□□□ -0.49
CACNA1C-225ENST00000480911 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
CACNA1C-225ENST00000480911 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-225ENST00000480911 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
CACNA1C-225ENST00000480911 KANK4Q5T7N3 995 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-225ENST00000480911 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
CACNA1C-225ENST00000480911 TCERG1O14776 1098 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-225ENST00000480911 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-225ENST00000480911 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-225ENST00000480911 GOLGA6L6A8MZA4 724 aa11.94□□□□□ -0.5
CACNA1C-225ENST00000480911 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-225ENST00000480911 BECN1Q14457 450 aa11.93□□□□□ -0.5
CACNA1C-225ENST00000480911 RALBP1Q15311 655 aa11.93□□□□□ -0.5
CACNA1C-225ENST00000480911 GOLGA6L22H0YM25 854 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 RGL3Q3MIN7 710 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 CUX1P39880 1505 aa11.92□□□□□ -0.5
CACNA1C-225ENST00000480911 ZBED9Q6R2W3 1325 aa11.91□□□□□ -0.5
CACNA1C-225ENST00000480911 PTPRGP23470 1445 aa11.91□□□□□ -0.5
CACNA1C-225ENST00000480911 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
CACNA1C-225ENST00000480911 FGD1P98174 961 aa11.9□□□□□ -0.5
CACNA1C-225ENST00000480911 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
CACNA1C-225ENST00000480911 EFCAB5A4FU69 1503 aa11.89□□□□□ -0.51
CACNA1C-225ENST00000480911 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
CACNA1C-225ENST00000480911 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
CACNA1C-225ENST00000480911 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
CACNA1C-225ENST00000480911 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-225ENST00000480911 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
CACNA1C-225ENST00000480911 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
CACNA1C-225ENST00000480911 L1TD1Q5T7N2 865 aaKnown RBP11.87□□□□□ -0.51
CACNA1C-225ENST00000480911 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
CACNA1C-225ENST00000480911 MS4A1P11836 297 aa11.87□□□□□ -0.51
CACNA1C-225ENST00000480911 MSH5O43196 834 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 WDR43Q15061 677 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 NRDCO43847 1150 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 NUDCQ9Y266 331 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 EVA1CP58658 441 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
CACNA1C-225ENST00000480911 SPAG9O60271 1321 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 HSPA5P11021 654 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 CHMP4BQ9H444 224 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 IGF1RP08069 1367 aa11.85□□□□□ -0.51
CACNA1C-225ENST00000480911 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNA1C-225ENST00000480911 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
CACNA1C-225ENST00000480911 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-225ENST00000480911 ATF3P18847 181 aa11.84□□□□□ -0.51
CACNA1C-225ENST00000480911 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
CACNA1C-225ENST00000480911 KIF3BO15066 747 aa11.83□□□□□ -0.52
CACNA1C-225ENST00000480911 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
CACNA1C-225ENST00000480911 CFAP44Q96MT7 982 aa11.83□□□□□ -0.52
CACNA1C-225ENST00000480911 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
CACNA1C-225ENST00000480911 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
CACNA1C-225ENST00000480911 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
CACNA1C-225ENST00000480911 CFTRP13569 1480 aa11.82□□□□□ -0.52
CACNA1C-225ENST00000480911 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
CACNA1C-225ENST00000480911 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
CACNA1C-225ENST00000480911 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
CACNA1C-225ENST00000480911 STK26Q9P289 416 aa11.81□□□□□ -0.52
CACNA1C-225ENST00000480911 SOX12O15370 315 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 HFM1A2PYH4 1435 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 PTMSP20962 102 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 ANKRD30AQ9BXX3 1397 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 AAMPQ13685 434 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
CACNA1C-225ENST00000480911 CALRP27797 417 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 KCNJ4P48050 445 aa11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 OS9Q13438 667 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
CACNA1C-225ENST00000480911 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms