RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 PHF8Q9UPP1 1060 aa14.34□□□□□ -0.11
RGPD6-209ENST00000480894 GPR153Q6NV75 609 aa14.31□□□□□ -0.12
RGPD6-209ENST00000480894 ZNF687Q8N1G0 1237 aa14.27□□□□□ -0.13
RGPD6-209ENST00000480894 RNF166Q96A37 237 aaPredicted RBP14.26□□□□□ -0.13
RGPD6-209ENST00000480894 NLRP6P59044 892 aa14.2□□□□□ -0.14
RGPD6-209ENST00000480894 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
RGPD6-209ENST00000480894 ARSIQ5FYB1 569 aa14.19□□□□□ -0.14
RGPD6-209ENST00000480894 FBXO22Q8NEZ5 403 aa14.19□□□□□ -0.14
RGPD6-209ENST00000480894 BCL11BQ9C0K0 894 aaPredicted RBP14.17□□□□□ -0.14
RGPD6-209ENST00000480894 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.15
RGPD6-209ENST00000480894 TAOK2Q9UL54 1235 aa14.13□□□□□ -0.15
RGPD6-209ENST00000480894 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
RGPD6-209ENST00000480894 PTGER2P43116 358 aa14.12□□□□□ -0.15
RGPD6-209ENST00000480894 STK24Q9Y6E0 443 aa14.11□□□□□ -0.15
RGPD6-209ENST00000480894 MFRPQ9BY79 579 aa14.1□□□□□ -0.15
RGPD6-209ENST00000480894 KIF3CO14782 793 aa14.07□□□□□ -0.16
RGPD6-209ENST00000480894 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
RGPD6-209ENST00000480894 C2orf72A6NCS6 295 aa14.04□□□□□ -0.16
RGPD6-209ENST00000480894 STK25O00506 426 aa14.03□□□□□ -0.16
RGPD6-209ENST00000480894 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.17
RGPD6-209ENST00000480894 NUDT7P0C024 238 aa13.99□□□□□ -0.17
RGPD6-209ENST00000480894 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
RGPD6-209ENST00000480894 SLC34A2O95436 690 aa13.96□□□□□ -0.17
RGPD6-209ENST00000480894 PBX2P40425 430 aa13.95□□□□□ -0.18
RGPD6-209ENST00000480894 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
RGPD6-209ENST00000480894 PCDHGA4Q9Y5G9 962 aa13.94□□□□□ -0.18
RGPD6-209ENST00000480894 POTEEQ6S8J3 1075 aa13.92□□□□□ -0.18
RGPD6-209ENST00000480894 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
RGPD6-209ENST00000480894 RGL2O15211 777 aa13.88□□□□□ -0.19
RGPD6-209ENST00000480894 AXIN2Q9Y2T1 843 aa13.88□□□□□ -0.19
RGPD6-209ENST00000480894 PKD2Q13563 968 aa13.85□□□□□ -0.19
RGPD6-209ENST00000480894 PPP1R37O75864 691 aa13.83□□□□□ -0.2
RGPD6-209ENST00000480894 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
RGPD6-209ENST00000480894 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
RGPD6-209ENST00000480894 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
RGPD6-209ENST00000480894 ADGRD1Q6QNK2 874 aa13.77□□□□□ -0.21
RGPD6-209ENST00000480894 PTCD2Q8WV60 388 aaKnown RBP13.74□□□□□ -0.21
RGPD6-209ENST00000480894 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
RGPD6-209ENST00000480894 PLA2G2EQ9NZK7 142 aa13.72□□□□□ -0.21
RGPD6-209ENST00000480894 FOXK1P85037 733 aa13.7□□□□□ -0.22
RGPD6-209ENST00000480894 TK2O00142 265 aa13.69□□□□□ -0.22
RGPD6-209ENST00000480894 DMRTA1Q5VZB9 504 aa13.68□□□□□ -0.22
RGPD6-209ENST00000480894 PLPP6Q8IY26 295 aa13.68□□□□□ -0.22
RGPD6-209ENST00000480894 HRO43593 1189 aa13.67□□□□□ -0.22
RGPD6-209ENST00000480894 PSEN2P49810 448 aa13.66□□□□□ -0.22
RGPD6-209ENST00000480894 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
RGPD6-209ENST00000480894 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
RGPD6-209ENST00000480894 DSG2Q14126 1118 aa13.62□□□□□ -0.23
RGPD6-209ENST00000480894 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
RGPD6-209ENST00000480894 TBC1D12O60347 775 aa13.59□□□□□ -0.23
RGPD6-209ENST00000480894 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
RGPD6-209ENST00000480894 KCNK17Q96T54 332 aa13.54□□□□□ -0.24
RGPD6-209ENST00000480894 KCNH8Q96L42 1107 aa13.51□□□□□ -0.25
RGPD6-209ENST00000480894 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
RGPD6-209ENST00000480894 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
RGPD6-209ENST00000480894 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
RGPD6-209ENST00000480894 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
RGPD6-209ENST00000480894 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
RGPD6-209ENST00000480894 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
RGPD6-209ENST00000480894 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
RGPD6-209ENST00000480894 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
RGPD6-209ENST00000480894 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
RGPD6-209ENST00000480894 BCL2L12Q9HB09 334 aa13.43□□□□□ -0.26
RGPD6-209ENST00000480894 SLC4A5Q9BY07 1137 aa13.42□□□□□ -0.26
RGPD6-209ENST00000480894 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
RGPD6-209ENST00000480894 FOSBP53539 338 aa13.39□□□□□ -0.27
RGPD6-209ENST00000480894 PTPN5P54829 565 aa13.39□□□□□ -0.27
RGPD6-209ENST00000480894 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
RGPD6-209ENST00000480894 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
RGPD6-209ENST00000480894 PTPREP23469 700 aa13.35□□□□□ -0.27
RGPD6-209ENST00000480894 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
RGPD6-209ENST00000480894 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
RGPD6-209ENST00000480894 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
RGPD6-209ENST00000480894 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
RGPD6-209ENST00000480894 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
RGPD6-209ENST00000480894 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
RGPD6-209ENST00000480894 PDE4AP27815 886 aa13.3□□□□□ -0.28
RGPD6-209ENST00000480894 GOLGA8CPA6NN73 597 aa13.28□□□□□ -0.28
RGPD6-209ENST00000480894 EVI5O60447 810 aa13.28□□□□□ -0.28
RGPD6-209ENST00000480894 RGS20O76081 388 aa13.28□□□□□ -0.28
RGPD6-209ENST00000480894 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
RGPD6-209ENST00000480894 WNT2BQ93097 391 aa13.28□□□□□ -0.28
RGPD6-209ENST00000480894 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
RGPD6-209ENST00000480894 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
RGPD6-209ENST00000480894 A0A0G2JS52 829 aa13.23□□□□□ -0.29
RGPD6-209ENST00000480894 NBPF3Q9H094 633 aa13.23□□□□□ -0.29
RGPD6-209ENST00000480894 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
RGPD6-209ENST00000480894 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
RGPD6-209ENST00000480894 GTPBP6O43824 516 aaPredicted RBP13.17□□□□□ -0.3
RGPD6-209ENST00000480894 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
RGPD6-209ENST00000480894 MFSD10Q14728 455 aa13.17□□□□□ -0.3
RGPD6-209ENST00000480894 PPP1R3GB7ZBB8 358 aa13.16□□□□□ -0.3
RGPD6-209ENST00000480894 IRX2Q9BZI1 471 aaPredicted RBP13.16□□□□□ -0.3
RGPD6-209ENST00000480894 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
RGPD6-209ENST00000480894 RABGEF1Q9UJ41 708 aa13.14□□□□□ -0.31
RGPD6-209ENST00000480894 PCDHGA10Q9Y5H3 936 aa13.14□□□□□ -0.31
RGPD6-209ENST00000480894 PROX2Q3B8N5 592 aa13.12□□□□□ -0.31
RGPD6-209ENST00000480894 COL9A1P20849 921 aa13.11□□□□□ -0.31
RGPD6-209ENST00000480894 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
RGPD6-209ENST00000480894 ITGBL1O95965 494 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms