RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 MLECQ14165 292 aa27.66■■■□□ 2.02
LSG1-208ENST00000480853 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
LSG1-208ENST00000480853 ZMYM4Q5VZL5 1548 aa27.66■■■□□ 2.02
LSG1-208ENST00000480853 PLPPR3Q6T4P5 718 aa27.65■■■□□ 2.02
LSG1-208ENST00000480853 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
LSG1-208ENST00000480853 CASKIN1Q8WXD9 1431 aa27.65■■■□□ 2.02
LSG1-208ENST00000480853 ZFYVE16Q7Z3T8 1539 aa27.64■■■□□ 2.02
LSG1-208ENST00000480853 POGZQ7Z3K3 1410 aa27.64■■■□□ 2.02
LSG1-208ENST00000480853 PCF11O94913 1555 aaKnown RBP27.64■■■□□ 2.01
LSG1-208ENST00000480853 AFAP1Q8N556 730 aa27.63■■■□□ 2.01
LSG1-208ENST00000480853 CLIP1P30622 1438 aa27.6■■■□□ 2.01
LSG1-208ENST00000480853 RIMS1Q86UR5 1692 aaKnown RBP27.59■■■□□ 2.01
LSG1-208ENST00000480853 MAGI2Q86UL8 1455 aa27.59■■■□□ 2.01
LSG1-208ENST00000480853 ARHGAP5Q13017 1502 aa27.59■■■□□ 2.01
LSG1-208ENST00000480853 CDC42BPBQ9Y5S2 1711 aa27.56■■■□□ 2
LSG1-208ENST00000480853 ATP10AO60312 1499 aa27.53■■■□□ 2
LSG1-208ENST00000480853 CCDC18Q5T9S5 1454 aa27.52■■■□□ 2
LSG1-208ENST00000480853 MYT1LQ9UL68 1186 aa27.52■■■□□ 2
LSG1-208ENST00000480853 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
LSG1-208ENST00000480853 FYCO1Q9BQS8 1478 aa27.47■■□□□ 1.99
LSG1-208ENST00000480853 TRAPPC8Q9Y2L5 1435 aa27.47■■□□□ 1.99
LSG1-208ENST00000480853 ZNF518AQ6AHZ1 1483 aa27.46■■□□□ 1.99
LSG1-208ENST00000480853 HSPA2P54652 639 aa27.46■■□□□ 1.99
LSG1-208ENST00000480853 C9orf84Q5VXU9 1444 aa27.46■■□□□ 1.99
LSG1-208ENST00000480853 LMTK3Q96Q04 1460 aa27.45■■□□□ 1.99
LSG1-208ENST00000480853 ZNF777Q9ULD5 760 aaPredicted RBP27.45■■□□□ 1.98
LSG1-208ENST00000480853 CEBPAP49715 358 aaPredicted RBP27.44■■□□□ 1.98
LSG1-208ENST00000480853 PREX2Q70Z35 1606 aa27.43■■□□□ 1.98
LSG1-208ENST00000480853 KDM5CP41229 1560 aa27.43■■□□□ 1.98
LSG1-208ENST00000480853 CDC42BPAQ5VT25 1732 aa27.42■■□□□ 1.98
LSG1-208ENST00000480853 FER1L4A9Z1Z3 1794 aa27.41■■□□□ 1.98
LSG1-208ENST00000480853 ABCC1P33527 1531 aa27.38■■□□□ 1.97
LSG1-208ENST00000480853 HNRNPMP52272 730 aaKnown RBP eCLIP27.37■■□□□ 1.97
LSG1-208ENST00000480853 DIP2CQ9Y2E4 1556 aa27.37■■□□□ 1.97
LSG1-208ENST00000480853 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
LSG1-208ENST00000480853 MLH3Q9UHC1 1453 aa27.36■■□□□ 1.97
LSG1-208ENST00000480853 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
LSG1-208ENST00000480853 ABCA6Q8N139 1617 aa27.34■■□□□ 1.97
LSG1-208ENST00000480853 LOC105371045A0A1W2PR82 267 aa27.32■■□□□ 1.96
LSG1-208ENST00000480853 SAMD9LQ8IVG5 1584 aa27.31■■□□□ 1.96
LSG1-208ENST00000480853 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
LSG1-208ENST00000480853 CFDP1Q9UEE9 299 aaPredicted RBP27.29■■□□□ 1.96
LSG1-208ENST00000480853 CEP162Q5TB80 1403 aa27.28■■□□□ 1.96
LSG1-208ENST00000480853 MTUS2Q5JR59 1369 aa27.28■■□□□ 1.96
LSG1-208ENST00000480853 CCNB3Q8WWL7 1395 aa27.26■■□□□ 1.95
LSG1-208ENST00000480853 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.95
LSG1-208ENST00000480853 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
LSG1-208ENST00000480853 REREQ9P2R6 1566 aa27.23■■□□□ 1.95
LSG1-208ENST00000480853 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
LSG1-208ENST00000480853 AGLP35573 1532 aa27.2■■□□□ 1.94
LSG1-208ENST00000480853 FBXO41Q8TF61 875 aa27.18■■□□□ 1.94
LSG1-208ENST00000480853 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
LSG1-208ENST00000480853 SETD1BQ9UPS6 1966 aaKnown RBP27.17■■□□□ 1.94
LSG1-208ENST00000480853 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
LSG1-208ENST00000480853 C3P01024 1663 aa27.14■■□□□ 1.93
LSG1-208ENST00000480853 PREX1Q8TCU6 1659 aa27.14■■□□□ 1.93
LSG1-208ENST00000480853 TIAM1Q13009 1591 aa27.14■■□□□ 1.93
LSG1-208ENST00000480853 SUPT6HQ7KZ85 1726 aaKnown RBP27.12■■□□□ 1.93
LSG1-208ENST00000480853 PLEKHH2Q8IVE3 1493 aa27.11■■□□□ 1.93
LSG1-208ENST00000480853 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
LSG1-208ENST00000480853 ATP7AQ04656 1500 aa27.1■■□□□ 1.93
LSG1-208ENST00000480853 MBD5Q9P267 1494 aa27.07■■□□□ 1.92
LSG1-208ENST00000480853 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
LSG1-208ENST00000480853 GGT6Q6P531 493 aa27.06■■□□□ 1.92
LSG1-208ENST00000480853 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
LSG1-208ENST00000480853 STRCQ7RTU9 1775 aa27.05■■□□□ 1.92
LSG1-208ENST00000480853 A2MP01023 1474 aa27.05■■□□□ 1.92
LSG1-208ENST00000480853 ZMYM3Q14202 1370 aa27.04■■□□□ 1.92
LSG1-208ENST00000480853 NCOA2Q15596 1464 aa27.03■■□□□ 1.92
LSG1-208ENST00000480853 CNTLNQ9NXG0 1405 aa27.01■■□□□ 1.91
LSG1-208ENST00000480853 CERKQ8TCT0 537 aa27.01■■□□□ 1.91
LSG1-208ENST00000480853 KANK4Q5T7N3 995 aaPredicted RBP26.99■■□□□ 1.91
LSG1-208ENST00000480853 PLXNC1O60486 1568 aa26.99■■□□□ 1.91
LSG1-208ENST00000480853 VPS8Q8N3P4 1428 aa26.96■■□□□ 1.91
LSG1-208ENST00000480853 CLTCQ00610 1675 aaKnown RBP26.95■■□□□ 1.91
LSG1-208ENST00000480853 DMRT2Q9Y5R5 561 aa26.93■■□□□ 1.9
LSG1-208ENST00000480853 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
LSG1-208ENST00000480853 RTEL1-TNFRSF6BF6WH68 1400 aa26.92■■□□□ 1.9
LSG1-208ENST00000480853 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
LSG1-208ENST00000480853 MROH2AA6NES4 1674 aa26.92■■□□□ 1.9
LSG1-208ENST00000480853 ADGBQ8N7X0 1667 aa26.92■■□□□ 1.9
LSG1-208ENST00000480853 LRRC9Q6ZRR7 1453 aa26.91■■□□□ 1.9
LSG1-208ENST00000480853 KIF3BO15066 747 aa26.89■■□□□ 1.9
LSG1-208ENST00000480853 NPATQ14207 1427 aa26.89■■□□□ 1.89
LSG1-208ENST00000480853 PTPRKQ15262 1439 aa26.88■■□□□ 1.89
LSG1-208ENST00000480853 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
LSG1-208ENST00000480853 RSPH4AQ5TD94 716 aa26.86■■□□□ 1.89
LSG1-208ENST00000480853 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
LSG1-208ENST00000480853 PPP6R1Q9UPN7 881 aa26.85■■□□□ 1.89
LSG1-208ENST00000480853 PTPRTO14522 1441 aa26.83■■□□□ 1.89
LSG1-208ENST00000480853 NCOA1Q15788 1441 aa26.83■■□□□ 1.89
LSG1-208ENST00000480853 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.89
LSG1-208ENST00000480853 TSPY4P0CV99 314 aa26.82■■□□□ 1.88
LSG1-208ENST00000480853 TSPY10P0CW01 314 aa26.82■■□□□ 1.88
LSG1-208ENST00000480853 CAMSAP1Q5T5Y3 1602 aa26.82■■□□□ 1.88
LSG1-208ENST00000480853 ARHGEF5Q12774 1597 aa26.77■■□□□ 1.88
LSG1-208ENST00000480853 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
LSG1-208ENST00000480853 MYO3AQ8NEV4 1616 aa26.75■■□□□ 1.87
LSG1-208ENST00000480853 WASHC2CQ9Y4E1 1318 aa26.74■■□□□ 1.87
LSG1-208ENST00000480853 MYOM3Q5VTT5 1437 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms