RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
CKAP2-206ENST00000480747 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
CKAP2-206ENST00000480747 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
CKAP2-206ENST00000480747 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
CKAP2-206ENST00000480747 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
CKAP2-206ENST00000480747 SNPHO15079 494 aa12.28□□□□□ -0.44
CKAP2-206ENST00000480747 NBR1Q14596 966 aa12.28□□□□□ -0.44
CKAP2-206ENST00000480747 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-206ENST00000480747 POTEMA6NI47 508 aa12.24□□□□□ -0.45
CKAP2-206ENST00000480747 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
CKAP2-206ENST00000480747 ST18O60284 1047 aa12.21□□□□□ -0.45
CKAP2-206ENST00000480747 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
CKAP2-206ENST00000480747 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-206ENST00000480747 PPP1R37O75864 691 aa12.15□□□□□ -0.46
CKAP2-206ENST00000480747 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
CKAP2-206ENST00000480747 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CKAP2-206ENST00000480747 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
CKAP2-206ENST00000480747 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
CKAP2-206ENST00000480747 KIF3CO14782 793 aa12.07□□□□□ -0.48
CKAP2-206ENST00000480747 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
CKAP2-206ENST00000480747 C2orf72A6NCS6 295 aa12.05□□□□□ -0.48
CKAP2-206ENST00000480747 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
CKAP2-206ENST00000480747 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
CKAP2-206ENST00000480747 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
CKAP2-206ENST00000480747 TMC2Q8TDI7 906 aa12.04□□□□□ -0.48
CKAP2-206ENST00000480747 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CKAP2-206ENST00000480747 EMP3P54852 163 aa12.02□□□□□ -0.49
CKAP2-206ENST00000480747 ZSWIM6Q9HCJ5 1215 aa12.01□□□□□ -0.49
CKAP2-206ENST00000480747 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
CKAP2-206ENST00000480747 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
CKAP2-206ENST00000480747 CDAN1Q8IWY9 1227 aa11.96□□□□□ -0.49
CKAP2-206ENST00000480747 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
CKAP2-206ENST00000480747 GPR153Q6NV75 609 aa11.93□□□□□ -0.5
CKAP2-206ENST00000480747 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CKAP2-206ENST00000480747 SLC34A2O95436 690 aa11.91□□□□□ -0.5
CKAP2-206ENST00000480747 FOXK1P85037 733 aa11.91□□□□□ -0.5
CKAP2-206ENST00000480747 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
CKAP2-206ENST00000480747 ARSIQ5FYB1 569 aa11.89□□□□□ -0.51
CKAP2-206ENST00000480747 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
CKAP2-206ENST00000480747 DSG2Q14126 1118 aa11.87□□□□□ -0.51
CKAP2-206ENST00000480747 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
CKAP2-206ENST00000480747 ERBB3P21860 1342 aa11.86□□□□□ -0.51
CKAP2-206ENST00000480747 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
CKAP2-206ENST00000480747 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
CKAP2-206ENST00000480747 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
CKAP2-206ENST00000480747 KHSRPQ92945 711 aaKnown RBP eCLIP11.84□□□□□ -0.51
CKAP2-206ENST00000480747 PCDHGA4Q9Y5G9 962 aa11.84□□□□□ -0.51
CKAP2-206ENST00000480747 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
CKAP2-206ENST00000480747 PDE4AP27815 886 aa11.83□□□□□ -0.52
CKAP2-206ENST00000480747 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.52
CKAP2-206ENST00000480747 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
CKAP2-206ENST00000480747 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
CKAP2-206ENST00000480747 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
CKAP2-206ENST00000480747 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
CKAP2-206ENST00000480747 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
CKAP2-206ENST00000480747 NUDT7P0C024 238 aa11.79□□□□□ -0.52
CKAP2-206ENST00000480747 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
CKAP2-206ENST00000480747 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
CKAP2-206ENST00000480747 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
CKAP2-206ENST00000480747 LARP6Q9BRS8 491 aaKnown RBP11.76□□□□□ -0.53
CKAP2-206ENST00000480747 MFSD10Q14728 455 aa11.75□□□□□ -0.53
CKAP2-206ENST00000480747 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
CKAP2-206ENST00000480747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
CKAP2-206ENST00000480747 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
CKAP2-206ENST00000480747 KRTAP3-2Q9BYR7 98 aa11.75□□□□□ -0.53
CKAP2-206ENST00000480747 TBC1D12O60347 775 aa11.74□□□□□ -0.53
CKAP2-206ENST00000480747 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
CKAP2-206ENST00000480747 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
CKAP2-206ENST00000480747 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
CKAP2-206ENST00000480747 KDM4FA0A1W2PPD8 638 aa11.71□□□□□ -0.53
CKAP2-206ENST00000480747 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
CKAP2-206ENST00000480747 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-206ENST00000480747 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
CKAP2-206ENST00000480747 ARXQ96QS3 562 aa11.67□□□□□ -0.54
CKAP2-206ENST00000480747 WDR70Q9NW82 654 aa11.67□□□□□ -0.54
CKAP2-206ENST00000480747 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
CKAP2-206ENST00000480747 SPNS2Q8IVW8 549 aa11.66□□□□□ -0.54
CKAP2-206ENST00000480747 C14orf37Q86TY3 774 aa11.64□□□□□ -0.55
CKAP2-206ENST00000480747 PBX2P40425 430 aa11.62□□□□□ -0.55
CKAP2-206ENST00000480747 EMILIN3Q9NT22 766 aa11.6□□□□□ -0.55
CKAP2-206ENST00000480747 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
CKAP2-206ENST00000480747 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
CKAP2-206ENST00000480747 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
CKAP2-206ENST00000480747 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
CKAP2-206ENST00000480747 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
CKAP2-206ENST00000480747 EVI5O60447 810 aa11.57□□□□□ -0.56
CKAP2-206ENST00000480747 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
CKAP2-206ENST00000480747 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
CKAP2-206ENST00000480747 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
CKAP2-206ENST00000480747 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
CKAP2-206ENST00000480747 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
CKAP2-206ENST00000480747 ARHGAP33O14559 1287 aa11.52□□□□□ -0.57
CKAP2-206ENST00000480747 SEMA3EO15041 775 aa11.52□□□□□ -0.57
CKAP2-206ENST00000480747 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
CKAP2-206ENST00000480747 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
CKAP2-206ENST00000480747 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
CKAP2-206ENST00000480747 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
CKAP2-206ENST00000480747 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
CKAP2-206ENST00000480747 FOSBP53539 338 aa11.5□□□□□ -0.57
CKAP2-206ENST00000480747 DPYSL4O14531 572 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms