RNA–Protein interactions for RNA: ENST00000480650.3

PDZD4-206, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-206ENST00000480650 FANCAO15360 1455 aa18.46■□□□□ 0.54
PDZD4-206ENST00000480650 PPRC1Q5VV67 1664 aaKnown RBP18.45■□□□□ 0.54
PDZD4-206ENST00000480650 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
PDZD4-206ENST00000480650 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
PDZD4-206ENST00000480650 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
PDZD4-206ENST00000480650 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
PDZD4-206ENST00000480650 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
PDZD4-206ENST00000480650 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
PDZD4-206ENST00000480650 NEO1Q92859 1461 aa18.41■□□□□ 0.54
PDZD4-206ENST00000480650 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
PDZD4-206ENST00000480650 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
PDZD4-206ENST00000480650 KDM6BO15054 1643 aa18.39■□□□□ 0.53
PDZD4-206ENST00000480650 ZNF644Q9H582 1327 aaPredicted RBP18.37■□□□□ 0.53
PDZD4-206ENST00000480650 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
PDZD4-206ENST00000480650 HNRNPMP52272 730 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDZD4-206ENST00000480650 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
PDZD4-206ENST00000480650 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
PDZD4-206ENST00000480650 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
PDZD4-206ENST00000480650 RAPGEF3O95398 923 aa18.34■□□□□ 0.53
PDZD4-206ENST00000480650 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
PDZD4-206ENST00000480650 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.53
PDZD4-206ENST00000480650 PLEKHH2Q8IVE3 1493 aa18.33■□□□□ 0.52
PDZD4-206ENST00000480650 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
PDZD4-206ENST00000480650 SAMD9LQ8IVG5 1584 aa18.32■□□□□ 0.52
PDZD4-206ENST00000480650 CAMSAP2Q08AD1 1489 aa18.31■□□□□ 0.52
PDZD4-206ENST00000480650 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
PDZD4-206ENST00000480650 COL17A1Q9UMD9 1497 aaPredicted RBP18.29■□□□□ 0.52
PDZD4-206ENST00000480650 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
PDZD4-206ENST00000480650 ABCC1P33527 1531 aa18.28■□□□□ 0.52
PDZD4-206ENST00000480650 KDM4FA0A1W2PPD8 638 aa18.28■□□□□ 0.52
PDZD4-206ENST00000480650 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
PDZD4-206ENST00000480650 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
PDZD4-206ENST00000480650 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
PDZD4-206ENST00000480650 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
PDZD4-206ENST00000480650 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
PDZD4-206ENST00000480650 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
PDZD4-206ENST00000480650 POGZQ7Z3K3 1410 aa18.25■□□□□ 0.51
PDZD4-206ENST00000480650 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
PDZD4-206ENST00000480650 ZNF518AQ6AHZ1 1483 aa18.25■□□□□ 0.51
PDZD4-206ENST00000480650 TCOF1Q13428 1488 aaKnown RBP18.23■□□□□ 0.51
PDZD4-206ENST00000480650 ITGAEP38570 1179 aa18.23■□□□□ 0.51
PDZD4-206ENST00000480650 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
PDZD4-206ENST00000480650 RICTORQ6R327 1708 aa18.22■□□□□ 0.51
PDZD4-206ENST00000480650 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
PDZD4-206ENST00000480650 MBD5Q9P267 1494 aa18.2■□□□□ 0.5
PDZD4-206ENST00000480650 FRMPD1Q5SYB0 1578 aa18.19■□□□□ 0.5
PDZD4-206ENST00000480650 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
PDZD4-206ENST00000480650 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
PDZD4-206ENST00000480650 CHIC2Q9UKJ5 165 aa18.18■□□□□ 0.5
PDZD4-206ENST00000480650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDZD4-206ENST00000480650 DAPK1P53355 1430 aa18.15■□□□□ 0.5
PDZD4-206ENST00000480650 KDM5CP41229 1560 aa18.15■□□□□ 0.5
PDZD4-206ENST00000480650 ABCC5O15440 1437 aa18.15■□□□□ 0.5
PDZD4-206ENST00000480650 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.5
PDZD4-206ENST00000480650 HECW2Q9P2P5 1572 aa18.14■□□□□ 0.49
PDZD4-206ENST00000480650 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
PDZD4-206ENST00000480650 ZMYM4Q5VZL5 1548 aa18.13■□□□□ 0.49
PDZD4-206ENST00000480650 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
PDZD4-206ENST00000480650 DNMT1P26358 1616 aaKnown RBP18.13■□□□□ 0.49
PDZD4-206ENST00000480650 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
PDZD4-206ENST00000480650 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
PDZD4-206ENST00000480650 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
PDZD4-206ENST00000480650 YEATS2Q9ULM3 1422 aa18.11■□□□□ 0.49
PDZD4-206ENST00000480650 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
PDZD4-206ENST00000480650 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
PDZD4-206ENST00000480650 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
PDZD4-206ENST00000480650 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
PDZD4-206ENST00000480650 ATP10AO60312 1499 aa18.08■□□□□ 0.49
PDZD4-206ENST00000480650 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
PDZD4-206ENST00000480650 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
PDZD4-206ENST00000480650 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
PDZD4-206ENST00000480650 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
PDZD4-206ENST00000480650 ARHGEF40Q8TER5 1519 aa18.06■□□□□ 0.48
PDZD4-206ENST00000480650 PTPRKQ15262 1439 aa18.05■□□□□ 0.48
PDZD4-206ENST00000480650 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
PDZD4-206ENST00000480650 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
PDZD4-206ENST00000480650 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
PDZD4-206ENST00000480650 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
PDZD4-206ENST00000480650 A2MP01023 1474 aa18.02■□□□□ 0.48
PDZD4-206ENST00000480650 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
PDZD4-206ENST00000480650 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
PDZD4-206ENST00000480650 MLECQ14165 292 aa18.01■□□□□ 0.47
PDZD4-206ENST00000480650 DHX29Q7Z478 1369 aaKnown RBP18.01■□□□□ 0.47
PDZD4-206ENST00000480650 PLXNC1O60486 1568 aa18■□□□□ 0.47
PDZD4-206ENST00000480650 KIF3BO15066 747 aa17.99■□□□□ 0.47
PDZD4-206ENST00000480650 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
PDZD4-206ENST00000480650 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
PDZD4-206ENST00000480650 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
PDZD4-206ENST00000480650 GGT6Q6P531 493 aa17.97■□□□□ 0.47
PDZD4-206ENST00000480650 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
PDZD4-206ENST00000480650 REREQ9P2R6 1566 aa17.95■□□□□ 0.46
PDZD4-206ENST00000480650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
PDZD4-206ENST00000480650 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
PDZD4-206ENST00000480650 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
PDZD4-206ENST00000480650 AGLP35573 1532 aa17.92■□□□□ 0.46
PDZD4-206ENST00000480650 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
PDZD4-206ENST00000480650 SIGLEC1Q9BZZ2 1709 aa17.91■□□□□ 0.46
PDZD4-206ENST00000480650 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
PDZD4-206ENST00000480650 NAIPQ13075 1403 aa17.89■□□□□ 0.45
PDZD4-206ENST00000480650 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms