RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
TDP2-205ENST00000480495 MAGI2Q86UL8 1455 aa24.1■■□□□ 1.45
TDP2-205ENST00000480495 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
TDP2-205ENST00000480495 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
TDP2-205ENST00000480495 ZFYVE16Q7Z3T8 1539 aa24.05■■□□□ 1.44
TDP2-205ENST00000480495 ARID4BQ4LE39 1312 aaPredicted RBP24.04■■□□□ 1.44
TDP2-205ENST00000480495 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
TDP2-205ENST00000480495 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
TDP2-205ENST00000480495 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
TDP2-205ENST00000480495 CDC42BPBQ9Y5S2 1711 aa24.01■■□□□ 1.43
TDP2-205ENST00000480495 MTUS2Q5JR59 1369 aa24.01■■□□□ 1.43
TDP2-205ENST00000480495 ADAMTSL3P82987 1691 aa23.98■■□□□ 1.43
TDP2-205ENST00000480495 BCORL1Q5H9F3 1711 aa23.96■■□□□ 1.43
TDP2-205ENST00000480495 AFAP1Q8N556 730 aa23.96■■□□□ 1.43
TDP2-205ENST00000480495 KDM5CP41229 1560 aa23.95■■□□□ 1.43
TDP2-205ENST00000480495 GPATCH8Q9UKJ3 1502 aaKnown RBP23.95■■□□□ 1.43
TDP2-205ENST00000480495 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
TDP2-205ENST00000480495 ABCC1P33527 1531 aa23.94■■□□□ 1.42
TDP2-205ENST00000480495 ATP10AO60312 1499 aa23.94■■□□□ 1.42
TDP2-205ENST00000480495 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
TDP2-205ENST00000480495 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
TDP2-205ENST00000480495 PTPRMP28827 1452 aa23.92■■□□□ 1.42
TDP2-205ENST00000480495 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
TDP2-205ENST00000480495 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
TDP2-205ENST00000480495 ARHGEF12Q9NZN5 1544 aa23.9■■□□□ 1.42
TDP2-205ENST00000480495 TRAPPC8Q9Y2L5 1435 aa23.9■■□□□ 1.42
TDP2-205ENST00000480495 MLH3Q9UHC1 1453 aa23.89■■□□□ 1.42
TDP2-205ENST00000480495 CFDP1Q9UEE9 299 aaPredicted RBP23.89■■□□□ 1.41
TDP2-205ENST00000480495 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
TDP2-205ENST00000480495 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.41
TDP2-205ENST00000480495 HECW2Q9P2P5 1572 aa23.89■■□□□ 1.41
TDP2-205ENST00000480495 ITSN2Q9NZM3 1697 aa23.88■■□□□ 1.41
TDP2-205ENST00000480495 MADDQ8WXG6 1647 aa23.88■■□□□ 1.41
TDP2-205ENST00000480495 PLEKHH2Q8IVE3 1493 aa23.86■■□□□ 1.41
TDP2-205ENST00000480495 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
TDP2-205ENST00000480495 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
TDP2-205ENST00000480495 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
TDP2-205ENST00000480495 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
TDP2-205ENST00000480495 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
TDP2-205ENST00000480495 SYCP2Q9BX26 1530 aa23.81■■□□□ 1.4
TDP2-205ENST00000480495 HNRNPMP52272 730 aaKnown RBP eCLIP23.81■■□□□ 1.4
TDP2-205ENST00000480495 MLECQ14165 292 aa23.81■■□□□ 1.4
TDP2-205ENST00000480495 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
TDP2-205ENST00000480495 RIMS1Q86UR5 1692 aaKnown RBP23.79■■□□□ 1.4
TDP2-205ENST00000480495 ABCA6Q8N139 1617 aa23.78■■□□□ 1.4
TDP2-205ENST00000480495 SPAG9O60271 1321 aaKnown RBP23.78■■□□□ 1.4
TDP2-205ENST00000480495 NCOA2Q15596 1464 aa23.77■■□□□ 1.4
TDP2-205ENST00000480495 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
TDP2-205ENST00000480495 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
TDP2-205ENST00000480495 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
TDP2-205ENST00000480495 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
TDP2-205ENST00000480495 AGLP35573 1532 aa23.74■■□□□ 1.39
TDP2-205ENST00000480495 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
TDP2-205ENST00000480495 FER1L4A9Z1Z3 1794 aa23.71■■□□□ 1.39
TDP2-205ENST00000480495 ATP7AQ04656 1500 aa23.69■■□□□ 1.38
TDP2-205ENST00000480495 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
TDP2-205ENST00000480495 INO80Q9ULG1 1556 aaPredicted RBP23.67■■□□□ 1.38
TDP2-205ENST00000480495 KANK4Q5T7N3 995 aaPredicted RBP23.66■■□□□ 1.38
TDP2-205ENST00000480495 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
TDP2-205ENST00000480495 RSPH4AQ5TD94 716 aa23.65■■□□□ 1.38
TDP2-205ENST00000480495 CAMSAP2Q08AD1 1489 aa23.64■■□□□ 1.38
TDP2-205ENST00000480495 APLP2Q06481 763 aa23.64■■□□□ 1.37
TDP2-205ENST00000480495 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
TDP2-205ENST00000480495 ESF1Q9H501 851 aaKnown RBP23.63■■□□□ 1.37
TDP2-205ENST00000480495 LMTK3Q96Q04 1460 aa23.62■■□□□ 1.37
TDP2-205ENST00000480495 A2MP01023 1474 aa23.62■■□□□ 1.37
TDP2-205ENST00000480495 CCDC141Q6ZP82 1450 aa23.61■■□□□ 1.37
TDP2-205ENST00000480495 CNTLNQ9NXG0 1405 aa23.59■■□□□ 1.37
TDP2-205ENST00000480495 PLXNC1O60486 1568 aa23.58■■□□□ 1.37
TDP2-205ENST00000480495 CEBPAP49715 358 aaPredicted RBP23.58■■□□□ 1.37
TDP2-205ENST00000480495 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
TDP2-205ENST00000480495 MIA2Q96PC5 1412 aa23.57■■□□□ 1.36
TDP2-205ENST00000480495 ARHGEF5Q12774 1597 aa23.56■■□□□ 1.36
TDP2-205ENST00000480495 ADGBQ8N7X0 1667 aa23.55■■□□□ 1.36
TDP2-205ENST00000480495 TSPY4P0CV99 314 aa23.53■■□□□ 1.36
TDP2-205ENST00000480495 TSPY10P0CW01 314 aa23.53■■□□□ 1.36
TDP2-205ENST00000480495 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
TDP2-205ENST00000480495 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
TDP2-205ENST00000480495 HSPA2P54652 639 aa23.49■■□□□ 1.35
TDP2-205ENST00000480495 GGT6Q6P531 493 aa23.49■■□□□ 1.35
TDP2-205ENST00000480495 C3P01024 1663 aa23.48■■□□□ 1.35
TDP2-205ENST00000480495 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
TDP2-205ENST00000480495 UHRF1BP1Q6BDS2 1440 aa23.47■■□□□ 1.35
TDP2-205ENST00000480495 MROH2AA6NES4 1674 aa23.46■■□□□ 1.35
TDP2-205ENST00000480495 ZMYM3Q14202 1370 aa23.46■■□□□ 1.35
TDP2-205ENST00000480495 SETD1BQ9UPS6 1966 aaKnown RBP23.45■■□□□ 1.35
TDP2-205ENST00000480495 MAST1Q9Y2H9 1570 aa23.43■■□□□ 1.34
TDP2-205ENST00000480495 NPATQ14207 1427 aa23.42■■□□□ 1.34
TDP2-205ENST00000480495 KIF3BO15066 747 aa23.42■■□□□ 1.34
TDP2-205ENST00000480495 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.34
TDP2-205ENST00000480495 FGD6Q6ZV73 1430 aa23.39■■□□□ 1.33
TDP2-205ENST00000480495 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
TDP2-205ENST00000480495 FAM135AQ9P2D6 1515 aa23.37■■□□□ 1.33
TDP2-205ENST00000480495 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
TDP2-205ENST00000480495 SHANK2Q9UPX8 1470 aa23.34■■□□□ 1.33
TDP2-205ENST00000480495 ABCC5O15440 1437 aa23.33■■□□□ 1.33
TDP2-205ENST00000480495 PTPRKQ15262 1439 aa23.33■■□□□ 1.33
TDP2-205ENST00000480495 KDM5DQ9BY66 1539 aa23.32■■□□□ 1.32
TDP2-205ENST00000480495 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
TDP2-205ENST00000480495 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms