RNA–Protein interactions for RNA: ENST00000480196.2

URB1-202, Transcript of URB1 ribosome biogenesis 1 homolog (S. cerevisiae), humanhuman

TSL 3

Gene URB1, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB1-202ENST00000480196 YEATS2Q9ULM3 1422 aa19.85■□□□□ 0.77
URB1-202ENST00000480196 PLCH2O75038 1416 aa19.85■□□□□ 0.77
URB1-202ENST00000480196 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
URB1-202ENST00000480196 ATP1B4Q9UN42 357 aaPredicted RBP19.84■□□□□ 0.77
URB1-202ENST00000480196 MAGI2Q86UL8 1455 aa19.83■□□□□ 0.76
URB1-202ENST00000480196 PREX2Q70Z35 1606 aa19.82■□□□□ 0.76
URB1-202ENST00000480196 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
URB1-202ENST00000480196 ARHGAP5Q13017 1502 aa19.81■□□□□ 0.76
URB1-202ENST00000480196 TROQ12816 1431 aaPredicted RBP19.81■□□□□ 0.76
URB1-202ENST00000480196 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
URB1-202ENST00000480196 LMTK3Q96Q04 1460 aa19.8■□□□□ 0.76
URB1-202ENST00000480196 CLIP1P30622 1438 aa19.8■□□□□ 0.76
URB1-202ENST00000480196 KDM5CP41229 1560 aa19.78■□□□□ 0.76
URB1-202ENST00000480196 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
URB1-202ENST00000480196 ITSN2Q9NZM3 1697 aa19.77■□□□□ 0.76
URB1-202ENST00000480196 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
URB1-202ENST00000480196 C9orf84Q5VXU9 1444 aa19.76■□□□□ 0.75
URB1-202ENST00000480196 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
URB1-202ENST00000480196 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
URB1-202ENST00000480196 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
URB1-202ENST00000480196 ABCA6Q8N139 1617 aa19.73■□□□□ 0.75
URB1-202ENST00000480196 ABCC1P33527 1531 aa19.73■□□□□ 0.75
URB1-202ENST00000480196 ARHGEF12Q9NZN5 1544 aa19.72■□□□□ 0.75
URB1-202ENST00000480196 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
URB1-202ENST00000480196 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
URB1-202ENST00000480196 ATP10AO60312 1499 aa19.71■□□□□ 0.75
URB1-202ENST00000480196 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
URB1-202ENST00000480196 PLPPR3Q6T4P5 718 aa19.7■□□□□ 0.74
URB1-202ENST00000480196 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
URB1-202ENST00000480196 MLECQ14165 292 aa19.68■□□□□ 0.74
URB1-202ENST00000480196 REREQ9P2R6 1566 aa19.67■□□□□ 0.74
URB1-202ENST00000480196 KIDINS220Q9ULH0 1771 aa19.63■□□□□ 0.73
URB1-202ENST00000480196 SAMD9LQ8IVG5 1584 aa19.62■□□□□ 0.73
URB1-202ENST00000480196 C3P01024 1663 aa19.62■□□□□ 0.73
URB1-202ENST00000480196 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
URB1-202ENST00000480196 MLH3Q9UHC1 1453 aa19.6■□□□□ 0.73
URB1-202ENST00000480196 HSPA2P54652 639 aa19.59■□□□□ 0.73
URB1-202ENST00000480196 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
URB1-202ENST00000480196 TRAPPC8Q9Y2L5 1435 aa19.59■□□□□ 0.73
URB1-202ENST00000480196 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
URB1-202ENST00000480196 AGLP35573 1532 aa19.56■□□□□ 0.72
URB1-202ENST00000480196 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
URB1-202ENST00000480196 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
URB1-202ENST00000480196 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
URB1-202ENST00000480196 STRCQ7RTU9 1775 aa19.52■□□□□ 0.72
URB1-202ENST00000480196 MROH2AA6NES4 1674 aa19.52■□□□□ 0.71
URB1-202ENST00000480196 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
URB1-202ENST00000480196 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
URB1-202ENST00000480196 GPATCH8Q9UKJ3 1502 aaKnown RBP19.5■□□□□ 0.71
URB1-202ENST00000480196 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
URB1-202ENST00000480196 EHBP1L1Q8N3D4 1523 aa19.49■□□□□ 0.71
URB1-202ENST00000480196 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
URB1-202ENST00000480196 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
URB1-202ENST00000480196 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
URB1-202ENST00000480196 CLTCQ00610 1675 aaKnown RBP19.46■□□□□ 0.71
URB1-202ENST00000480196 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
URB1-202ENST00000480196 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
URB1-202ENST00000480196 PLEKHH2Q8IVE3 1493 aa19.45■□□□□ 0.7
URB1-202ENST00000480196 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
URB1-202ENST00000480196 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
URB1-202ENST00000480196 CNTLNQ9NXG0 1405 aa19.42■□□□□ 0.7
URB1-202ENST00000480196 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
URB1-202ENST00000480196 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
URB1-202ENST00000480196 CEP162Q5TB80 1403 aa19.4■□□□□ 0.7
URB1-202ENST00000480196 ZNF142P52746 1687 aaPredicted RBP19.4■□□□□ 0.7
URB1-202ENST00000480196 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
URB1-202ENST00000480196 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
URB1-202ENST00000480196 A2MP01023 1474 aa19.37■□□□□ 0.69
URB1-202ENST00000480196 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
URB1-202ENST00000480196 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.69
URB1-202ENST00000480196 CERKQ8TCT0 537 aa19.34■□□□□ 0.69
URB1-202ENST00000480196 NPATQ14207 1427 aa19.33■□□□□ 0.68
URB1-202ENST00000480196 CAMSAP1Q5T5Y3 1602 aa19.33■□□□□ 0.68
URB1-202ENST00000480196 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
URB1-202ENST00000480196 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
URB1-202ENST00000480196 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
URB1-202ENST00000480196 MBD5Q9P267 1494 aa19.29■□□□□ 0.68
URB1-202ENST00000480196 PTPRTO14522 1441 aa19.29■□□□□ 0.68
URB1-202ENST00000480196 NCOA2Q15596 1464 aa19.28■□□□□ 0.68
URB1-202ENST00000480196 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
URB1-202ENST00000480196 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
URB1-202ENST00000480196 ZMYM3Q14202 1370 aa19.27■□□□□ 0.68
URB1-202ENST00000480196 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
URB1-202ENST00000480196 POLR1AO95602 1720 aaPredicted RBP19.24■□□□□ 0.67
URB1-202ENST00000480196 LTBP4Q8N2S1 1624 aa19.24■□□□□ 0.67
URB1-202ENST00000480196 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
URB1-202ENST00000480196 RTEL1-TNFRSF6BF6WH68 1400 aa19.23■□□□□ 0.67
URB1-202ENST00000480196 PTPRKQ15262 1439 aa19.23■□□□□ 0.67
URB1-202ENST00000480196 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
URB1-202ENST00000480196 GGT6Q6P531 493 aa19.21■□□□□ 0.67
URB1-202ENST00000480196 FAM135AQ9P2D6 1515 aa19.2■□□□□ 0.66
URB1-202ENST00000480196 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
URB1-202ENST00000480196 VPS8Q8N3P4 1428 aa19.19■□□□□ 0.66
URB1-202ENST00000480196 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
URB1-202ENST00000480196 IQSEC2Q5JU85 1478 aa19.17■□□□□ 0.66
URB1-202ENST00000480196 ZC3H13Q5T200 1668 aaKnown RBP19.17■□□□□ 0.66
URB1-202ENST00000480196 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
URB1-202ENST00000480196 RNF17Q9BXT8 1623 aaKnown RBP19.16■□□□□ 0.66
URB1-202ENST00000480196 DHX29Q7Z478 1369 aaKnown RBP19.16■□□□□ 0.66
URB1-202ENST00000480196 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms