RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
PRPF4B-205ENST00000480058 ISY1Q9ULR0 285 aaKnown RBP7.79□□□□□ -1.16
PRPF4B-205ENST00000480058 CGNL1Q0VF96 1302 aa7.79□□□□□ -1.16
PRPF4B-205ENST00000480058 BAZ1BQ9UIG0 1483 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-205ENST00000480058 GOLGA6L3A6NEY3 463 aa7.78□□□□□ -1.16
PRPF4B-205ENST00000480058 HIRIP3Q9BW71 556 aaPredicted RBP7.78□□□□□ -1.16
PRPF4B-205ENST00000480058 ZBED9Q6R2W3 1325 aa7.78□□□□□ -1.16
PRPF4B-205ENST00000480058 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.16
PRPF4B-205ENST00000480058 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.16
PRPF4B-205ENST00000480058 CSPP1Q1MSJ5 1256 aa7.77□□□□□ -1.17
PRPF4B-205ENST00000480058 DDX11L8A8MPP1 907 aa7.77□□□□□ -1.17
PRPF4B-205ENST00000480058 ARHGAP35Q9NRY4 1499 aa7.76□□□□□ -1.17
PRPF4B-205ENST00000480058 ARXQ96QS3 562 aa7.76□□□□□ -1.17
PRPF4B-205ENST00000480058 GOLGA2Q08379 1002 aa7.76□□□□□ -1.17
PRPF4B-205ENST00000480058 MTERF4Q7Z6M4 381 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-205ENST00000480058 CENPQQ7L2Z9 268 aaPredicted RBP7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 MAP7D2Q96T17 732 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 KANK1Q14678 1352 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 RAB3GAP2Q9H2M9 1393 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 KIF3AQ9Y496 699 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 PHF14O94880 888 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 HMMRO75330 724 aa7.75□□□□□ -1.17
PRPF4B-205ENST00000480058 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
PRPF4B-205ENST00000480058 FRAT1Q92837 279 aaPredicted RBP7.74□□□□□ -1.17
PRPF4B-205ENST00000480058 ATP6V1DQ9Y5K8 247 aa7.74□□□□□ -1.17
PRPF4B-205ENST00000480058 ANKRD30AQ9BXX3 1397 aa7.74□□□□□ -1.17
PRPF4B-205ENST00000480058 EIF3AQ14152 1382 aaKnown RBP7.73□□□□□ -1.17
PRPF4B-205ENST00000480058 LMOD3Q0VAK6 560 aa7.73□□□□□ -1.17
PRPF4B-205ENST00000480058 GSE1Q14687 1217 aa7.73□□□□□ -1.17
PRPF4B-205ENST00000480058 FAM161AQ3B820 660 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 WASHC2AQ641Q2 1341 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 WASHC2CQ9Y4E1 1318 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 PRKRIP1Q9H875 184 aaPredicted RBP7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 FGD1P98174 961 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 DCAF11Q8TEB1 546 aa7.72□□□□□ -1.17
PRPF4B-205ENST00000480058 KIAA1211Q6ZU35 1233 aa7.71□□□□□ -1.17
PRPF4B-205ENST00000480058 MPHOSPH9Q99550 1183 aa7.71□□□□□ -1.17
PRPF4B-205ENST00000480058 DHX57Q6P158 1386 aaKnown RBP7.71□□□□□ -1.18
PRPF4B-205ENST00000480058 KCNJ4P48050 445 aa7.71□□□□□ -1.18
PRPF4B-205ENST00000480058 KIF15Q9NS87 1388 aa7.71□□□□□ -1.18
PRPF4B-205ENST00000480058 MYBBP1AQ9BQG0 1328 aaKnown RBP7.7□□□□□ -1.18
PRPF4B-205ENST00000480058 POGKQ9P215 609 aa7.7□□□□□ -1.18
PRPF4B-205ENST00000480058 PKD2Q13563 968 aa7.7□□□□□ -1.18
PRPF4B-205ENST00000480058 SOGA1O94964 1423 aa7.7□□□□□ -1.18
PRPF4B-205ENST00000480058 HSP90AA2PQ14568 343 aaPredicted RBP7.7□□□□□ -1.18
PRPF4B-205ENST00000480058 PDE4AP27815 886 aa7.69□□□□□ -1.18
PRPF4B-205ENST00000480058 ST18O60284 1047 aa7.69□□□□□ -1.18
PRPF4B-205ENST00000480058 TPM4P67936 248 aa7.69□□□□□ -1.18
PRPF4B-205ENST00000480058 L3MBTL2Q969R5 705 aa7.69□□□□□ -1.18
PRPF4B-205ENST00000480058 CARMIL2Q6F5E8 1435 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 E9PSI1 815 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 EFCAB2Q5VUJ9 269 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 CHMP5Q9NZZ3 219 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 CENPJQ9HC77 1338 aaPredicted RBP7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 CUX2O14529 1486 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
PRPF4B-205ENST00000480058 PLCB2Q00722 1185 aa7.67□□□□□ -1.18
PRPF4B-205ENST00000480058 HDGFL2Q7Z4V5 671 aaPredicted RBP7.67□□□□□ -1.18
PRPF4B-205ENST00000480058 TERF2IPQ9NYB0 399 aa7.67□□□□□ -1.18
PRPF4B-205ENST00000480058 U2SURPO15042 1029 aaKnown RBP7.66□□□□□ -1.18
PRPF4B-205ENST00000480058 NUP155O75694 1391 aa7.66□□□□□ -1.18
PRPF4B-205ENST00000480058 OS9Q13438 667 aaPredicted RBP7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 DHX8Q14562 1220 aaKnown RBP7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 RTN4Q9NQC3 1192 aaKnown RBP7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 NUCB2P80303 420 aa7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
PRPF4B-205ENST00000480058 TPM3P06753 285 aa7.65□□□□□ -1.19
PRPF4B-205ENST00000480058 REC8O95072 547 aa7.65□□□□□ -1.19
PRPF4B-205ENST00000480058 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 MRE11P49959 708 aa7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 RRP1P56182 461 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 CC2D1BQ5T0F9 858 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 STK31Q9BXU1 1019 aa7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 SLKQ9H2G2 1235 aaPredicted RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 IL27Q8NEV9 243 aa7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 U2AF1L5P0DN76 240 aaPredicted RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 HMGN5P82970 282 aaKnown RBP7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 U2AF1Q01081 240 aaKnown RBP eCLIP7.64□□□□□ -1.193e-14■■■■■ 28.3
PRPF4B-205ENST00000480058 GPS2Q13227 327 aa7.64□□□□□ -1.19
PRPF4B-205ENST00000480058 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 DRC7Q8IY82 874 aa7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 GOLGA6L1Q8N7Z2 621 aa7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 RTF1Q92541 710 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 CECR2Q9BXF3 1484 aa7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 ZKSCAN2Q63HK3 967 aa7.63□□□□□ -1.19
PRPF4B-205ENST00000480058 CCDC18Q5T9S5 1454 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 UACAQ9BZF9 1416 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 DDX19BQ9UMR2 479 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 MIA2Q96PC5 1412 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 KIF16BQ96L93 1317 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 RAPGEF2Q9Y4G8 1499 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 DDX49Q9Y6V7 483 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 SMARCA2P51531 1590 aa7.62□□□□□ -1.19
PRPF4B-205ENST00000480058 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
PRPF4B-205ENST00000480058 SPAG9O60271 1321 aaKnown RBP7.61□□□□□ -1.19
PRPF4B-205ENST00000480058 MBD3O95983 291 aa7.61□□□□□ -1.19
PRPF4B-205ENST00000480058 SMC4Q9NTJ3 1288 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms