RNA–Protein interactions for RNA: ENST00000479913.1

RET-203, Transcript of ret proto-oncogene, humanhuman

TSL 4

Gene RET, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-203ENST00000479913 ARHGAP5Q13017 1502 aa29.4■■■□□ 2.3
RET-203ENST00000479913 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
RET-203ENST00000479913 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.3
RET-203ENST00000479913 CDC42BPBQ9Y5S2 1711 aa29.39■■■□□ 2.3
RET-203ENST00000479913 SCAPERQ9BY12 1400 aa29.38■■■□□ 2.29
RET-203ENST00000479913 ADGRL1O94910 1474 aa29.37■■■□□ 2.29
RET-203ENST00000479913 PREX2Q70Z35 1606 aa29.37■■■□□ 2.29
RET-203ENST00000479913 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
RET-203ENST00000479913 FRMPD1Q5SYB0 1578 aa29.36■■■□□ 2.29
RET-203ENST00000479913 CDC42BPAQ5VT25 1732 aa29.35■■■□□ 2.29
RET-203ENST00000479913 NCOA2Q15596 1464 aa29.32■■■□□ 2.28
RET-203ENST00000479913 CFDP1Q9UEE9 299 aaPredicted RBP29.31■■■□□ 2.28
RET-203ENST00000479913 APLP2Q06481 763 aa29.3■■■□□ 2.28
RET-203ENST00000479913 RICTORQ6R327 1708 aa29.3■■■□□ 2.28
RET-203ENST00000479913 ZNF777Q9ULD5 760 aaPredicted RBP29.29■■■□□ 2.28
RET-203ENST00000479913 POGZQ7Z3K3 1410 aa29.28■■■□□ 2.28
RET-203ENST00000479913 ARHGEF12Q9NZN5 1544 aa29.27■■■□□ 2.28
RET-203ENST00000479913 AFAP1Q8N556 730 aa29.26■■■□□ 2.27
RET-203ENST00000479913 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
RET-203ENST00000479913 ABCC1P33527 1531 aa29.23■■■□□ 2.27
RET-203ENST00000479913 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
RET-203ENST00000479913 SAMD9LQ8IVG5 1584 aa29.22■■■□□ 2.27
RET-203ENST00000479913 TRAPPC8Q9Y2L5 1435 aa29.22■■■□□ 2.27
RET-203ENST00000479913 ZMYM4Q5VZL5 1548 aa29.21■■■□□ 2.27
RET-203ENST00000479913 HNRNPMP52272 730 aaKnown RBP eCLIP29.2■■■□□ 2.26
RET-203ENST00000479913 ZNF518AQ6AHZ1 1483 aa29.18■■■□□ 2.26
RET-203ENST00000479913 YEATS2Q9ULM3 1422 aa29.18■■■□□ 2.26
RET-203ENST00000479913 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
RET-203ENST00000479913 KIAA1107Q9UPP5 1409 aa29.17■■■□□ 2.26
RET-203ENST00000479913 MAGI2Q86UL8 1455 aa29.17■■■□□ 2.26
RET-203ENST00000479913 KDM5CP41229 1560 aa29.14■■■□□ 2.26
RET-203ENST00000479913 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.26
RET-203ENST00000479913 PLEKHH2Q8IVE3 1493 aa29.13■■■□□ 2.25
RET-203ENST00000479913 SYCP2Q9BX26 1530 aa29.13■■■□□ 2.25
RET-203ENST00000479913 ZFYVE16Q7Z3T8 1539 aa29.1■■■□□ 2.25
RET-203ENST00000479913 ARHGEF40Q8TER5 1519 aa29.1■■■□□ 2.25
RET-203ENST00000479913 ILDR1Q86SU0 546 aaPredicted RBP29.1■■■□□ 2.25
RET-203ENST00000479913 MBD5Q9P267 1494 aa29.1■■■□□ 2.25
RET-203ENST00000479913 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
RET-203ENST00000479913 MYOM3Q5VTT5 1437 aa29.08■■■□□ 2.25
RET-203ENST00000479913 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
RET-203ENST00000479913 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
RET-203ENST00000479913 MYT1LQ9UL68 1186 aa29.04■■■□□ 2.24
RET-203ENST00000479913 ATP10AO60312 1499 aa29.04■■■□□ 2.24
RET-203ENST00000479913 SPAG9O60271 1321 aaKnown RBP29.02■■■□□ 2.24
RET-203ENST00000479913 HECW2Q9P2P5 1572 aa29.02■■■□□ 2.24
RET-203ENST00000479913 ARID4BQ4LE39 1312 aaPredicted RBP28.98■■■□□ 2.23
RET-203ENST00000479913 RSPH4AQ5TD94 716 aa28.97■■■□□ 2.23
RET-203ENST00000479913 KIDINS220Q9ULH0 1771 aa28.97■■■□□ 2.23
RET-203ENST00000479913 DIP2CQ9Y2E4 1556 aa28.96■■■□□ 2.23
RET-203ENST00000479913 C9orf84Q5VXU9 1444 aa28.96■■■□□ 2.23
RET-203ENST00000479913 PPARGC1BQ86YN6 1023 aaKnown RBP28.96■■■□□ 2.23
RET-203ENST00000479913 SIGLEC1Q9BZZ2 1709 aa28.96■■■□□ 2.23
RET-203ENST00000479913 ABCA6Q8N139 1617 aa28.94■■■□□ 2.22
RET-203ENST00000479913 FGD6Q6ZV73 1430 aa28.94■■■□□ 2.22
RET-203ENST00000479913 CCDC141Q6ZP82 1450 aa28.92■■■□□ 2.22
RET-203ENST00000479913 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
RET-203ENST00000479913 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
RET-203ENST00000479913 INO80Q9ULG1 1556 aaPredicted RBP28.89■■■□□ 2.22
RET-203ENST00000479913 RTEL1-TNFRSF6BF6WH68 1400 aa28.89■■■□□ 2.22
RET-203ENST00000479913 TCOF1Q13428 1488 aaKnown RBP28.87■■■□□ 2.21
RET-203ENST00000479913 BCORL1Q5H9F3 1711 aa28.87■■■□□ 2.21
RET-203ENST00000479913 REREQ9P2R6 1566 aa28.87■■■□□ 2.21
RET-203ENST00000479913 PTPN23Q9H3S7 1636 aa28.87■■■□□ 2.21
RET-203ENST00000479913 ADAMTSL3P82987 1691 aa28.86■■■□□ 2.21
RET-203ENST00000479913 TSPY4P0CV99 314 aa28.85■■■□□ 2.21
RET-203ENST00000479913 TSPY10P0CW01 314 aa28.85■■■□□ 2.21
RET-203ENST00000479913 MLECQ14165 292 aa28.85■■■□□ 2.21
RET-203ENST00000479913 AGLP35573 1532 aa28.81■■■□□ 2.2
RET-203ENST00000479913 ABCC5O15440 1437 aa28.8■■■□□ 2.2
RET-203ENST00000479913 A2MP01023 1474 aa28.79■■■□□ 2.2
RET-203ENST00000479913 MADDQ8WXG6 1647 aa28.76■■■□□ 2.19
RET-203ENST00000479913 DHX29Q7Z478 1369 aaKnown RBP28.75■■■□□ 2.19
RET-203ENST00000479913 FAM50AQ14320 339 aaKnown RBP28.75■■■□□ 2.19
RET-203ENST00000479913 MAST1Q9Y2H9 1570 aa28.75■■■□□ 2.19
RET-203ENST00000479913 PLXNC1O60486 1568 aa28.74■■■□□ 2.19
RET-203ENST00000479913 DAPK1P53355 1430 aa28.73■■■□□ 2.19
RET-203ENST00000479913 PTPRMP28827 1452 aa28.72■■■□□ 2.19
RET-203ENST00000479913 ADGBQ8N7X0 1667 aa28.7■■■□□ 2.18
RET-203ENST00000479913 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
RET-203ENST00000479913 SHANK2Q9UPX8 1470 aa28.67■■■□□ 2.18
RET-203ENST00000479913 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
RET-203ENST00000479913 RIMS1Q86UR5 1692 aaKnown RBP28.64■■■□□ 2.18
RET-203ENST00000479913 CROCC2H7BZ55 1655 aa28.63■■■□□ 2.17
RET-203ENST00000479913 KIF3BO15066 747 aa28.62■■■□□ 2.17
RET-203ENST00000479913 GGT6Q6P531 493 aa28.62■■■□□ 2.17
RET-203ENST00000479913 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
RET-203ENST00000479913 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
RET-203ENST00000479913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.6■■■□□ 2.17
RET-203ENST00000479913 FER1L4A9Z1Z3 1794 aa28.6■■■□□ 2.17
RET-203ENST00000479913 KIF15Q9NS87 1388 aa28.58■■■□□ 2.17
RET-203ENST00000479913 NCOA1Q15788 1441 aa28.58■■■□□ 2.17
RET-203ENST00000479913 RRBP1Q9P2E9 1410 aaKnown RBP28.58■■■□□ 2.17
RET-203ENST00000479913 CEBPAP49715 358 aaPredicted RBP28.57■■■□□ 2.16
RET-203ENST00000479913 PLPPR3Q6T4P5 718 aa28.56■■■□□ 2.16
RET-203ENST00000479913 ANKRD30AQ9BXX3 1397 aa28.56■■■□□ 2.16
RET-203ENST00000479913 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
RET-203ENST00000479913 DUOX2Q9NRD8 1548 aa28.54■■■□□ 2.16
RET-203ENST00000479913 ADGRL2O95490 1459 aa28.54■■■□□ 2.16
RET-203ENST00000479913 ESF1Q9H501 851 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms