RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 TROQ12816 1431 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF3-209ENST00000479866 MPHOSPH9Q99550 1183 aa16.15■□□□□ 0.18
RAPGEF3-209ENST00000479866 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
RAPGEF3-209ENST00000479866 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
RAPGEF3-209ENST00000479866 UACAQ9BZF9 1416 aa16.14■□□□□ 0.17
RAPGEF3-209ENST00000479866 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
RAPGEF3-209ENST00000479866 KIAA0556O60303 1618 aa16.14■□□□□ 0.17
RAPGEF3-209ENST00000479866 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-209ENST00000479866 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
RAPGEF3-209ENST00000479866 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF3-209ENST00000479866 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
RAPGEF3-209ENST00000479866 PKD2Q13563 968 aa16.12■□□□□ 0.17
RAPGEF3-209ENST00000479866 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-209ENST00000479866 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
RAPGEF3-209ENST00000479866 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
RAPGEF3-209ENST00000479866 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
RAPGEF3-209ENST00000479866 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
RAPGEF3-209ENST00000479866 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.17
RAPGEF3-209ENST00000479866 NUP155O75694 1391 aa16.08■□□□□ 0.17
RAPGEF3-209ENST00000479866 AFAP1Q8N556 730 aa16.08■□□□□ 0.16
RAPGEF3-209ENST00000479866 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
RAPGEF3-209ENST00000479866 ATP10BO94823 1461 aa16.07■□□□□ 0.16
RAPGEF3-209ENST00000479866 CCDC136Q96JN2 1154 aa16.07■□□□□ 0.16
RAPGEF3-209ENST00000479866 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
RAPGEF3-209ENST00000479866 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
RAPGEF3-209ENST00000479866 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
RAPGEF3-209ENST00000479866 GGT6Q6P531 493 aa16.03■□□□□ 0.16
RAPGEF3-209ENST00000479866 MIER1Q8N108 512 aa16.02■□□□□ 0.16
RAPGEF3-209ENST00000479866 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
RAPGEF3-209ENST00000479866 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF3-209ENST00000479866 KIF3BO15066 747 aa16.01■□□□□ 0.15
RAPGEF3-209ENST00000479866 MIA2Q96PC5 1412 aa16.01■□□□□ 0.15
RAPGEF3-209ENST00000479866 ARHGAP5Q13017 1502 aa16■□□□□ 0.15
RAPGEF3-209ENST00000479866 MLECQ14165 292 aa15.99■□□□□ 0.15
RAPGEF3-209ENST00000479866 CHD1O14646 1710 aa15.99■□□□□ 0.15
RAPGEF3-209ENST00000479866 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
RAPGEF3-209ENST00000479866 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
RAPGEF3-209ENST00000479866 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
RAPGEF3-209ENST00000479866 CFAP43Q8NDM7 1665 aa15.98■□□□□ 0.15
RAPGEF3-209ENST00000479866 NAIPQ13075 1403 aa15.98■□□□□ 0.15
RAPGEF3-209ENST00000479866 KIF15Q9NS87 1388 aa15.97■□□□□ 0.15
RAPGEF3-209ENST00000479866 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
RAPGEF3-209ENST00000479866 DAPK1P53355 1430 aa15.97■□□□□ 0.15
RAPGEF3-209ENST00000479866 PPP1R15AO75807 674 aaPredicted RBP15.97■□□□□ 0.15
RAPGEF3-209ENST00000479866 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
RAPGEF3-209ENST00000479866 DCAF11Q8TEB1 546 aa15.96■□□□□ 0.15
RAPGEF3-209ENST00000479866 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
RAPGEF3-209ENST00000479866 GPATCH8Q9UKJ3 1502 aaKnown RBP15.95■□□□□ 0.14
RAPGEF3-209ENST00000479866 ABCC5O15440 1437 aa15.95■□□□□ 0.14
RAPGEF3-209ENST00000479866 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
RAPGEF3-209ENST00000479866 ANKRD50Q9ULJ7 1429 aa15.94■□□□□ 0.14
RAPGEF3-209ENST00000479866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF3-209ENST00000479866 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF3-209ENST00000479866 CAMSAP2Q08AD1 1489 aa15.93■□□□□ 0.14
RAPGEF3-209ENST00000479866 ANP32CO43423 234 aa15.92■□□□□ 0.14
RAPGEF3-209ENST00000479866 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF3-209ENST00000479866 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
RAPGEF3-209ENST00000479866 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
RAPGEF3-209ENST00000479866 RAPGEF3O95398 923 aa15.9■□□□□ 0.14
RAPGEF3-209ENST00000479866 KIF14Q15058 1648 aa15.89■□□□□ 0.13
RAPGEF3-209ENST00000479866 BCANQ96GW7 911 aa15.88■□□□□ 0.13
RAPGEF3-209ENST00000479866 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
RAPGEF3-209ENST00000479866 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
RAPGEF3-209ENST00000479866 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
RAPGEF3-209ENST00000479866 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF3-209ENST00000479866 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
RAPGEF3-209ENST00000479866 NCOA1Q15788 1441 aa15.83■□□□□ 0.12
RAPGEF3-209ENST00000479866 KANK1Q14678 1352 aa15.82■□□□□ 0.12
RAPGEF3-209ENST00000479866 PKNOX2Q96KN3 472 aa15.82■□□□□ 0.12
RAPGEF3-209ENST00000479866 ABCC2Q92887 1545 aa15.81■□□□□ 0.12
RAPGEF3-209ENST00000479866 ASXL2Q76L83 1435 aa15.81■□□□□ 0.12
RAPGEF3-209ENST00000479866 AKNAQ7Z591 1439 aa15.8■□□□□ 0.12
RAPGEF3-209ENST00000479866 ABCA8O94911 1581 aa15.8■□□□□ 0.12
RAPGEF3-209ENST00000479866 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
RAPGEF3-209ENST00000479866 NUTM2DQ5VT03 806 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF3-209ENST00000479866 CD109Q6YHK3 1445 aa15.78■□□□□ 0.12
RAPGEF3-209ENST00000479866 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
RAPGEF3-209ENST00000479866 ROCK1Q13464 1354 aa15.77■□□□□ 0.12
RAPGEF3-209ENST00000479866 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
RAPGEF3-209ENST00000479866 TCOF1Q13428 1488 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-209ENST00000479866 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
RAPGEF3-209ENST00000479866 FANCAO15360 1455 aa15.74■□□□□ 0.11
RAPGEF3-209ENST00000479866 CCDC144AA2RUR9 1427 aa15.74■□□□□ 0.11
RAPGEF3-209ENST00000479866 SENP3-EIF4A1A0A087X0R7 540 aa15.74■□□□□ 0.11
RAPGEF3-209ENST00000479866 PLCH2O75038 1416 aa15.73■□□□□ 0.11
RAPGEF3-209ENST00000479866 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
RAPGEF3-209ENST00000479866 WDR7Q9Y4E6 1490 aa15.73■□□□□ 0.11
RAPGEF3-209ENST00000479866 TRAPPC8Q9Y2L5 1435 aa15.72■□□□□ 0.11
RAPGEF3-209ENST00000479866 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
RAPGEF3-209ENST00000479866 ADGRL1O94910 1474 aa15.72■□□□□ 0.11
RAPGEF3-209ENST00000479866 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
RAPGEF3-209ENST00000479866 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
RAPGEF3-209ENST00000479866 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
RAPGEF3-209ENST00000479866 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF3-209ENST00000479866 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
RAPGEF3-209ENST00000479866 ITSN2Q9NZM3 1697 aa15.68■□□□□ 0.1
RAPGEF3-209ENST00000479866 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
RAPGEF3-209ENST00000479866 ROCK2O75116 1388 aaKnown RBP15.67■□□□□ 0.1
RAPGEF3-209ENST00000479866 A0A0U1RQG5 324 aaPredicted RBP15.66■□□□□ 0.1
RAPGEF3-209ENST00000479866 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms