RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 PREX2Q70Z35 1606 aa29.67■■■□□ 2.34
AGRN-208ENST00000479707 KANK4Q5T7N3 995 aaPredicted RBP29.67■■■□□ 2.34
AGRN-208ENST00000479707 ADGRL1O94910 1474 aa29.66■■■□□ 2.34
AGRN-208ENST00000479707 CCNB3Q8WWL7 1395 aa29.65■■■□□ 2.34
AGRN-208ENST00000479707 DENND4BO75064 1496 aaPredicted RBP29.65■■■□□ 2.34
AGRN-208ENST00000479707 SCAPERQ9BY12 1400 aa29.64■■■□□ 2.34
AGRN-208ENST00000479707 LRRC9Q6ZRR7 1453 aa29.64■■■□□ 2.34
AGRN-208ENST00000479707 ZNF777Q9ULD5 760 aaPredicted RBP29.64■■■□□ 2.34
AGRN-208ENST00000479707 GPATCH8Q9UKJ3 1502 aaKnown RBP29.64■■■□□ 2.34
AGRN-208ENST00000479707 MAP3K1Q13233 1512 aa29.63■■■□□ 2.33
AGRN-208ENST00000479707 SUPT6HQ7KZ85 1726 aaKnown RBP29.62■■■□□ 2.33
AGRN-208ENST00000479707 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
AGRN-208ENST00000479707 RICTORQ6R327 1708 aa29.59■■■□□ 2.33
AGRN-208ENST00000479707 NCOA2Q15596 1464 aa29.58■■■□□ 2.33
AGRN-208ENST00000479707 CFDP1Q9UEE9 299 aaPredicted RBP29.58■■■□□ 2.33
AGRN-208ENST00000479707 POGZQ7Z3K3 1410 aa29.52■■■□□ 2.32
AGRN-208ENST00000479707 ITSN2Q9NZM3 1697 aa29.51■■■□□ 2.31
AGRN-208ENST00000479707 AFAP1Q8N556 730 aa29.5■■■□□ 2.31
AGRN-208ENST00000479707 SAMD9LQ8IVG5 1584 aa29.5■■■□□ 2.31
AGRN-208ENST00000479707 ABCC1P33527 1531 aa29.49■■■□□ 2.31
AGRN-208ENST00000479707 ARHGEF12Q9NZN5 1544 aa29.49■■■□□ 2.31
AGRN-208ENST00000479707 HNRNPMP52272 730 aaKnown RBP eCLIP29.47■■■□□ 2.31
AGRN-208ENST00000479707 ZNF644Q9H582 1327 aaPredicted RBP29.46■■■□□ 2.31
AGRN-208ENST00000479707 MYT1LQ9UL68 1186 aa29.46■■■□□ 2.31
AGRN-208ENST00000479707 TRAPPC8Q9Y2L5 1435 aa29.45■■■□□ 2.3
AGRN-208ENST00000479707 ZNF518AQ6AHZ1 1483 aa29.43■■■□□ 2.3
AGRN-208ENST00000479707 ZMYM4Q5VZL5 1548 aa29.43■■■□□ 2.3
AGRN-208ENST00000479707 SYCP2Q9BX26 1530 aa29.42■■■□□ 2.3
AGRN-208ENST00000479707 YEATS2Q9ULM3 1422 aa29.4■■■□□ 2.3
AGRN-208ENST00000479707 ZFYVE16Q7Z3T8 1539 aa29.39■■■□□ 2.3
AGRN-208ENST00000479707 PLEKHH2Q8IVE3 1493 aa29.38■■■□□ 2.29
AGRN-208ENST00000479707 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
AGRN-208ENST00000479707 ARHGEF40Q8TER5 1519 aa29.36■■■□□ 2.29
AGRN-208ENST00000479707 KDM5CP41229 1560 aa29.36■■■□□ 2.29
AGRN-208ENST00000479707 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
AGRN-208ENST00000479707 KDM4FA0A1W2PPD8 638 aa29.35■■■□□ 2.29
AGRN-208ENST00000479707 PPARGC1BQ86YN6 1023 aaKnown RBP29.35■■■□□ 2.29
AGRN-208ENST00000479707 ARID4BQ4LE39 1312 aaPredicted RBP29.33■■■□□ 2.29
AGRN-208ENST00000479707 MYOM3Q5VTT5 1437 aa29.33■■■□□ 2.29
AGRN-208ENST00000479707 CAMSAP2Q08AD1 1489 aa29.33■■■□□ 2.29
AGRN-208ENST00000479707 HECW2Q9P2P5 1572 aa29.31■■■□□ 2.28
AGRN-208ENST00000479707 SPAG9O60271 1321 aaKnown RBP29.28■■■□□ 2.28
AGRN-208ENST00000479707 AEBP2Q6ZN18 517 aaPredicted RBP29.28■■■□□ 2.28
AGRN-208ENST00000479707 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
AGRN-208ENST00000479707 MLH3Q9UHC1 1453 aa29.28■■■□□ 2.28
AGRN-208ENST00000479707 ATP10AO60312 1499 aa29.26■■■□□ 2.27
AGRN-208ENST00000479707 MIA2Q96PC5 1412 aa29.26■■■□□ 2.27
AGRN-208ENST00000479707 KIDINS220Q9ULH0 1771 aa29.25■■■□□ 2.27
AGRN-208ENST00000479707 SIGLEC1Q9BZZ2 1709 aa29.23■■■□□ 2.27
AGRN-208ENST00000479707 ABCA6Q8N139 1617 aa29.23■■■□□ 2.27
AGRN-208ENST00000479707 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
AGRN-208ENST00000479707 C9orf84Q5VXU9 1444 aa29.21■■■□□ 2.27
AGRN-208ENST00000479707 ATP7AQ04656 1500 aa29.19■■■□□ 2.26
AGRN-208ENST00000479707 CCDC141Q6ZP82 1450 aa29.18■■■□□ 2.26
AGRN-208ENST00000479707 MLECQ14165 292 aa29.18■■■□□ 2.26
AGRN-208ENST00000479707 RSPH4AQ5TD94 716 aa29.18■■■□□ 2.26
AGRN-208ENST00000479707 PTPN23Q9H3S7 1636 aa29.18■■■□□ 2.26
AGRN-208ENST00000479707 FGD6Q6ZV73 1430 aa29.18■■■□□ 2.26
AGRN-208ENST00000479707 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
AGRN-208ENST00000479707 BCORL1Q5H9F3 1711 aa29.15■■■□□ 2.26
AGRN-208ENST00000479707 ARHGEF5Q12774 1597 aa29.15■■■□□ 2.26
AGRN-208ENST00000479707 TSPY4P0CV99 314 aa29.14■■■□□ 2.26
AGRN-208ENST00000479707 TSPY10P0CW01 314 aa29.14■■■□□ 2.26
AGRN-208ENST00000479707 ADAMTSL3P82987 1691 aa29.09■■■□□ 2.25
AGRN-208ENST00000479707 FAM50AQ14320 339 aaKnown RBP29.09■■■□□ 2.25
AGRN-208ENST00000479707 RTEL1-TNFRSF6BF6WH68 1400 aa29.09■■■□□ 2.25
AGRN-208ENST00000479707 TCOF1Q13428 1488 aaKnown RBP29.08■■■□□ 2.25
AGRN-208ENST00000479707 REREQ9P2R6 1566 aa29.08■■■□□ 2.25
AGRN-208ENST00000479707 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
AGRN-208ENST00000479707 A2MP01023 1474 aa29.04■■■□□ 2.24
AGRN-208ENST00000479707 ADGBQ8N7X0 1667 aa29.03■■■□□ 2.24
AGRN-208ENST00000479707 ABCC5O15440 1437 aa29.03■■■□□ 2.24
AGRN-208ENST00000479707 AGLP35573 1532 aa29■■■□□ 2.23
AGRN-208ENST00000479707 DAPK1P53355 1430 aa29■■■□□ 2.23
AGRN-208ENST00000479707 RIMS1Q86UR5 1692 aaKnown RBP28.99■■■□□ 2.23
AGRN-208ENST00000479707 DNMT1P26358 1616 aaKnown RBP28.99■■■□□ 2.23
AGRN-208ENST00000479707 MAST1Q9Y2H9 1570 aa28.99■■■□□ 2.23
AGRN-208ENST00000479707 PLPPR3Q6T4P5 718 aa28.98■■■□□ 2.23
AGRN-208ENST00000479707 CHIC2Q9UKJ5 165 aa28.98■■■□□ 2.23
AGRN-208ENST00000479707 CROCC2H7BZ55 1655 aa28.97■■■□□ 2.23
AGRN-208ENST00000479707 FER1L4A9Z1Z3 1794 aa28.96■■■□□ 2.23
AGRN-208ENST00000479707 DHX29Q7Z478 1369 aaKnown RBP28.96■■■□□ 2.23
AGRN-208ENST00000479707 PLXNC1O60486 1568 aa28.96■■■□□ 2.23
AGRN-208ENST00000479707 PTPRMP28827 1452 aa28.94■■■□□ 2.22
AGRN-208ENST00000479707 GGT6Q6P531 493 aa28.93■■■□□ 2.22
AGRN-208ENST00000479707 RRP7BPQ9NSQ0 103 aa28.91■■■□□ 2.22
AGRN-208ENST00000479707 SHANK2Q9UPX8 1470 aa28.91■■■□□ 2.22
AGRN-208ENST00000479707 KIF3BO15066 747 aa28.9■■■□□ 2.22
AGRN-208ENST00000479707 ESF1Q9H501 851 aaKnown RBP28.9■■■□□ 2.22
AGRN-208ENST00000479707 ITGAEP38570 1179 aa28.88■■■□□ 2.21
AGRN-208ENST00000479707 CEBPAP49715 358 aaPredicted RBP28.84■■■□□ 2.21
AGRN-208ENST00000479707 KIF15Q9NS87 1388 aa28.84■■■□□ 2.21
AGRN-208ENST00000479707 ANKRD30AQ9BXX3 1397 aa28.83■■■□□ 2.21
AGRN-208ENST00000479707 PTPRKQ15262 1439 aa28.81■■■□□ 2.2
AGRN-208ENST00000479707 DUOX2Q9NRD8 1548 aa28.8■■■□□ 2.2
AGRN-208ENST00000479707 RRBP1Q9P2E9 1410 aaKnown RBP28.79■■■□□ 2.2
AGRN-208ENST00000479707 NCOA1Q15788 1441 aa28.78■■■□□ 2.2
AGRN-208ENST00000479707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.77■■■□□ 2.2
AGRN-208ENST00000479707 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
AGRN-208ENST00000479707 ADGRL2O95490 1459 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms