RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 ARHGEF40Q8TER5 1519 aa24.18■■□□□ 1.46
PRKN-207ENST00000479615 ARHGAP5Q13017 1502 aa24.16■■□□□ 1.46
PRKN-207ENST00000479615 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
PRKN-207ENST00000479615 ZFYVE16Q7Z3T8 1539 aa24.14■■□□□ 1.45
PRKN-207ENST00000479615 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
PRKN-207ENST00000479615 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
PRKN-207ENST00000479615 ADAMTSL3P82987 1691 aa24.09■■□□□ 1.45
PRKN-207ENST00000479615 YEATS2Q9ULM3 1422 aa24.09■■□□□ 1.45
PRKN-207ENST00000479615 PTPRMP28827 1452 aa24.07■■□□□ 1.44
PRKN-207ENST00000479615 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
PRKN-207ENST00000479615 ATP10AO60312 1499 aa24.07■■□□□ 1.44
PRKN-207ENST00000479615 AFAP1Q8N556 730 aa24.06■■□□□ 1.44
PRKN-207ENST00000479615 MTUS2Q5JR59 1369 aa24.05■■□□□ 1.44
PRKN-207ENST00000479615 PREX2Q70Z35 1606 aa24.05■■□□□ 1.44
PRKN-207ENST00000479615 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
PRKN-207ENST00000479615 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
PRKN-207ENST00000479615 KDM5CP41229 1560 aa24.03■■□□□ 1.44
PRKN-207ENST00000479615 CDC42BPBQ9Y5S2 1711 aa24.02■■□□□ 1.44
PRKN-207ENST00000479615 MLH3Q9UHC1 1453 aa24.01■■□□□ 1.43
PRKN-207ENST00000479615 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
PRKN-207ENST00000479615 CFDP1Q9UEE9 299 aaPredicted RBP24■■□□□ 1.43
PRKN-207ENST00000479615 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
PRKN-207ENST00000479615 ABCC1P33527 1531 aa23.99■■□□□ 1.43
PRKN-207ENST00000479615 HECW2Q9P2P5 1572 aa23.98■■□□□ 1.43
PRKN-207ENST00000479615 PLEKHH2Q8IVE3 1493 aa23.97■■□□□ 1.43
PRKN-207ENST00000479615 MADDQ8WXG6 1647 aa23.96■■□□□ 1.43
PRKN-207ENST00000479615 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
PRKN-207ENST00000479615 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.42
PRKN-207ENST00000479615 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.42
PRKN-207ENST00000479615 LOC105371045A0A1W2PR82 267 aa23.95■■□□□ 1.42
PRKN-207ENST00000479615 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
PRKN-207ENST00000479615 ARHGEF12Q9NZN5 1544 aa23.94■■□□□ 1.42
PRKN-207ENST00000479615 MLECQ14165 292 aa23.93■■□□□ 1.42
PRKN-207ENST00000479615 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
PRKN-207ENST00000479615 REREQ9P2R6 1566 aa23.91■■□□□ 1.42
PRKN-207ENST00000479615 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
PRKN-207ENST00000479615 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.41
PRKN-207ENST00000479615 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
PRKN-207ENST00000479615 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
PRKN-207ENST00000479615 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
PRKN-207ENST00000479615 DIP2CQ9Y2E4 1556 aa23.86■■□□□ 1.41
PRKN-207ENST00000479615 RIMS1Q86UR5 1692 aaKnown RBP23.86■■□□□ 1.41
PRKN-207ENST00000479615 AGLP35573 1532 aa23.85■■□□□ 1.41
PRKN-207ENST00000479615 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
PRKN-207ENST00000479615 SYCP2Q9BX26 1530 aa23.84■■□□□ 1.41
PRKN-207ENST00000479615 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
PRKN-207ENST00000479615 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
PRKN-207ENST00000479615 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
PRKN-207ENST00000479615 TIAM1Q13009 1591 aa23.8■■□□□ 1.4
PRKN-207ENST00000479615 FER1L4A9Z1Z3 1794 aa23.79■■□□□ 1.4
PRKN-207ENST00000479615 MAP3K1Q13233 1512 aa23.79■■□□□ 1.4
PRKN-207ENST00000479615 KIDINS220Q9ULH0 1771 aa23.78■■□□□ 1.4
PRKN-207ENST00000479615 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
PRKN-207ENST00000479615 LMTK3Q96Q04 1460 aa23.78■■□□□ 1.4
PRKN-207ENST00000479615 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
PRKN-207ENST00000479615 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
PRKN-207ENST00000479615 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
PRKN-207ENST00000479615 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
PRKN-207ENST00000479615 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
PRKN-207ENST00000479615 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
PRKN-207ENST00000479615 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
PRKN-207ENST00000479615 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
PRKN-207ENST00000479615 APLP2Q06481 763 aa23.72■■□□□ 1.39
PRKN-207ENST00000479615 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
PRKN-207ENST00000479615 A2MP01023 1474 aa23.7■■□□□ 1.38
PRKN-207ENST00000479615 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
PRKN-207ENST00000479615 CEBPAP49715 358 aaPredicted RBP23.69■■□□□ 1.38
PRKN-207ENST00000479615 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
PRKN-207ENST00000479615 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
PRKN-207ENST00000479615 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
PRKN-207ENST00000479615 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
PRKN-207ENST00000479615 PLXNC1O60486 1568 aa23.64■■□□□ 1.37
PRKN-207ENST00000479615 HSPA2P54652 639 aa23.63■■□□□ 1.37
PRKN-207ENST00000479615 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
PRKN-207ENST00000479615 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
PRKN-207ENST00000479615 MIA2Q96PC5 1412 aa23.63■■□□□ 1.37
PRKN-207ENST00000479615 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
PRKN-207ENST00000479615 DHX29Q7Z478 1369 aaKnown RBP23.63■■□□□ 1.37
PRKN-207ENST00000479615 ADGBQ8N7X0 1667 aa23.6■■□□□ 1.37
PRKN-207ENST00000479615 GGT6Q6P531 493 aa23.6■■□□□ 1.37
PRKN-207ENST00000479615 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
PRKN-207ENST00000479615 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
PRKN-207ENST00000479615 ARHGEF5Q12774 1597 aa23.59■■□□□ 1.37
PRKN-207ENST00000479615 NPATQ14207 1427 aa23.59■■□□□ 1.37
PRKN-207ENST00000479615 MYOM3Q5VTT5 1437 aa23.59■■□□□ 1.37
PRKN-207ENST00000479615 DMRT2Q9Y5R5 561 aa23.58■■□□□ 1.37
PRKN-207ENST00000479615 MROH2AA6NES4 1674 aa23.55■■□□□ 1.36
PRKN-207ENST00000479615 ILDR1Q86SU0 546 aaPredicted RBP23.55■■□□□ 1.36
PRKN-207ENST00000479615 C3P01024 1663 aa23.54■■□□□ 1.36
PRKN-207ENST00000479615 KIF3BO15066 747 aa23.51■■□□□ 1.35
PRKN-207ENST00000479615 FAM135AQ9P2D6 1515 aa23.49■■□□□ 1.35
PRKN-207ENST00000479615 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
PRKN-207ENST00000479615 FBXO41Q8TF61 875 aa23.45■■□□□ 1.34
PRKN-207ENST00000479615 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
PRKN-207ENST00000479615 WASHC2CQ9Y4E1 1318 aa23.44■■□□□ 1.34
PRKN-207ENST00000479615 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
PRKN-207ENST00000479615 PTPRTO14522 1441 aa23.4■■□□□ 1.34
PRKN-207ENST00000479615 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
PRKN-207ENST00000479615 SHANK2Q9UPX8 1470 aa23.38■■□□□ 1.33
PRKN-207ENST00000479615 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms