RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 VPS8Q8N3P4 1428 aa32.92■■■□□ 2.86
PKP4-209ENST00000479398 RICTORQ6R327 1708 aa32.91■■■□□ 2.86
PKP4-209ENST00000479398 CDC42BPBQ9Y5S2 1711 aa32.91■■■□□ 2.86
PKP4-209ENST00000479398 PREX2Q70Z35 1606 aa32.84■■■□□ 2.85
PKP4-209ENST00000479398 CDC42BPAQ5VT25 1732 aa32.83■■■□□ 2.85
PKP4-209ENST00000479398 POGZQ7Z3K3 1410 aa32.81■■■□□ 2.84
PKP4-209ENST00000479398 GPATCH8Q9UKJ3 1502 aaKnown RBP32.81■■■□□ 2.84
PKP4-209ENST00000479398 ZMYM4Q5VZL5 1548 aa32.78■■■□□ 2.84
PKP4-209ENST00000479398 EHBP1L1Q8N3D4 1523 aa32.77■■■□□ 2.84
PKP4-209ENST00000479398 AFAP1Q8N556 730 aa32.77■■■□□ 2.84
PKP4-209ENST00000479398 CCNB3Q8WWL7 1395 aa32.77■■■□□ 2.84
PKP4-209ENST00000479398 MAGI2Q86UL8 1455 aa32.76■■■□□ 2.84
PKP4-209ENST00000479398 ZNF777Q9ULD5 760 aaPredicted RBP32.76■■■□□ 2.83
PKP4-209ENST00000479398 CFDP1Q9UEE9 299 aaPredicted RBP32.75■■■□□ 2.83
PKP4-209ENST00000479398 TIAM1Q13009 1591 aa32.75■■■□□ 2.83
PKP4-209ENST00000479398 ZNF518AQ6AHZ1 1483 aa32.72■■■□□ 2.83
PKP4-209ENST00000479398 YEATS2Q9ULM3 1422 aa32.71■■■□□ 2.83
PKP4-209ENST00000479398 ZFYVE16Q7Z3T8 1539 aa32.7■■■□□ 2.83
PKP4-209ENST00000479398 ARHGEF40Q8TER5 1519 aa32.7■■■□□ 2.83
PKP4-209ENST00000479398 ARHGEF12Q9NZN5 1544 aa32.7■■■□□ 2.83
PKP4-209ENST00000479398 ARID4BQ4LE39 1312 aaPredicted RBP32.69■■■□□ 2.82
PKP4-209ENST00000479398 ABCC1P33527 1531 aa32.68■■■□□ 2.82
PKP4-209ENST00000479398 MAP3K1Q13233 1512 aa32.67■■■□□ 2.82
PKP4-209ENST00000479398 TRAPPC8Q9Y2L5 1435 aa32.66■■■□□ 2.82
PKP4-209ENST00000479398 MYT1LQ9UL68 1186 aa32.65■■■□□ 2.82
PKP4-209ENST00000479398 LRRC9Q6ZRR7 1453 aa32.65■■■□□ 2.82
PKP4-209ENST00000479398 HNRNPMP52272 730 aaKnown RBP eCLIP32.64■■■□□ 2.82
PKP4-209ENST00000479398 KANK4Q5T7N3 995 aaPredicted RBP32.64■■■□□ 2.82
PKP4-209ENST00000479398 SAMD9LQ8IVG5 1584 aa32.64■■■□□ 2.82
PKP4-209ENST00000479398 SUPT6HQ7KZ85 1726 aaKnown RBP32.63■■■□□ 2.81
PKP4-209ENST00000479398 KDM5CP41229 1560 aa32.63■■■□□ 2.81
PKP4-209ENST00000479398 ITSN2Q9NZM3 1697 aa32.62■■■□□ 2.81
PKP4-209ENST00000479398 NCOA2Q15596 1464 aa32.62■■■□□ 2.81
PKP4-209ENST00000479398 APLP2Q06481 763 aa32.62■■■□□ 2.81
PKP4-209ENST00000479398 ATP10AO60312 1499 aa32.61■■■□□ 2.81
PKP4-209ENST00000479398 KIAA1107Q9UPP5 1409 aa32.6■■■□□ 2.81
PKP4-209ENST00000479398 PLEKHH2Q8IVE3 1493 aa32.58■■■□□ 2.81
PKP4-209ENST00000479398 MLH3Q9UHC1 1453 aa32.58■■■□□ 2.81
PKP4-209ENST00000479398 ZNF644Q9H582 1327 aaPredicted RBP32.57■■■□□ 2.8
PKP4-209ENST00000479398 SYCP2Q9BX26 1530 aa32.55■■■□□ 2.8
PKP4-209ENST00000479398 BCORL1Q5H9F3 1711 aa32.54■■■□□ 2.8
PKP4-209ENST00000479398 HECW2Q9P2P5 1572 aa32.54■■■□□ 2.8
PKP4-209ENST00000479398 ADAMTSL3P82987 1691 aa32.54■■■□□ 2.8
PKP4-209ENST00000479398 C9orf84Q5VXU9 1444 aa32.51■■■□□ 2.8
PKP4-209ENST00000479398 SIGLEC1Q9BZZ2 1709 aa32.51■■■□□ 2.79
PKP4-209ENST00000479398 SPAG9O60271 1321 aaKnown RBP32.49■■■□□ 2.79
PKP4-209ENST00000479398 KIDINS220Q9ULH0 1771 aa32.46■■■□□ 2.79
PKP4-209ENST00000479398 MLECQ14165 292 aa32.46■■■□□ 2.79
PKP4-209ENST00000479398 DIP2CQ9Y2E4 1556 aa32.45■■■□□ 2.79
PKP4-209ENST00000479398 MBD5Q9P267 1494 aa32.44■■■□□ 2.78
PKP4-209ENST00000479398 ABCA6Q8N139 1617 aa32.43■■■□□ 2.78
PKP4-209ENST00000479398 RSPH4AQ5TD94 716 aa32.41■■■□□ 2.78
PKP4-209ENST00000479398 PTPRMP28827 1452 aa32.4■■■□□ 2.78
PKP4-209ENST00000479398 MADDQ8WXG6 1647 aa32.4■■■□□ 2.78
PKP4-209ENST00000479398 REREQ9P2R6 1566 aa32.39■■■□□ 2.78
PKP4-209ENST00000479398 CAMSAP2Q08AD1 1489 aa32.37■■■□□ 2.77
PKP4-209ENST00000479398 MYOM3Q5VTT5 1437 aa32.34■■■□□ 2.77
PKP4-209ENST00000479398 ATP7AQ04656 1500 aa32.34■■■□□ 2.77
PKP4-209ENST00000479398 MIA2Q96PC5 1412 aa32.33■■■□□ 2.77
PKP4-209ENST00000479398 AGLP35573 1532 aa32.31■■■□□ 2.76
PKP4-209ENST00000479398 RIMS1Q86UR5 1692 aaKnown RBP32.31■■■□□ 2.76
PKP4-209ENST00000479398 INO80Q9ULG1 1556 aaPredicted RBP32.31■■■□□ 2.76
PKP4-209ENST00000479398 RTEL1-TNFRSF6BF6WH68 1400 aa32.3■■■□□ 2.76
PKP4-209ENST00000479398 CCDC141Q6ZP82 1450 aa32.29■■■□□ 2.76
PKP4-209ENST00000479398 TSPY4P0CV99 314 aa32.27■■■□□ 2.76
PKP4-209ENST00000479398 TSPY10P0CW01 314 aa32.27■■■□□ 2.76
PKP4-209ENST00000479398 FER1L4A9Z1Z3 1794 aa32.25■■■□□ 2.75
PKP4-209ENST00000479398 ARHGEF5Q12774 1597 aa32.24■■■□□ 2.75
PKP4-209ENST00000479398 A2MP01023 1474 aa32.24■■■□□ 2.75
PKP4-209ENST00000479398 PLPPR3Q6T4P5 718 aa32.22■■■□□ 2.75
PKP4-209ENST00000479398 ADGBQ8N7X0 1667 aa32.18■■■□□ 2.74
PKP4-209ENST00000479398 ESF1Q9H501 851 aaKnown RBP32.17■■■□□ 2.74
PKP4-209ENST00000479398 PLXNC1O60486 1568 aa32.15■■■□□ 2.74
PKP4-209ENST00000479398 DHX29Q7Z478 1369 aaKnown RBP32.15■■■□□ 2.74
PKP4-209ENST00000479398 CEBPAP49715 358 aaPredicted RBP32.14■■■□□ 2.74
PKP4-209ENST00000479398 FGD6Q6ZV73 1430 aa32.13■■■□□ 2.73
PKP4-209ENST00000479398 PTPN23Q9H3S7 1636 aa32.13■■■□□ 2.73
PKP4-209ENST00000479398 GGT6Q6P531 493 aa32.11■■■□□ 2.73
PKP4-209ENST00000479398 MAST1Q9Y2H9 1570 aa32.07■■■□□ 2.72
PKP4-209ENST00000479398 TCOF1Q13428 1488 aaKnown RBP32.07■■■□□ 2.72
PKP4-209ENST00000479398 PPP6R1Q9UPN7 881 aa32.06■■■□□ 2.72
PKP4-209ENST00000479398 KIF3BO15066 747 aa32.05■■■□□ 2.72
PKP4-209ENST00000479398 CNTLNQ9NXG0 1405 aa32.05■■■□□ 2.72
PKP4-209ENST00000479398 ABCC5O15440 1437 aa32.04■■■□□ 2.72
PKP4-209ENST00000479398 PPARGC1BQ86YN6 1023 aaKnown RBP32.01■■■□□ 2.71
PKP4-209ENST00000479398 SETD1BQ9UPS6 1966 aaKnown RBP31.99■■■□□ 2.71
PKP4-209ENST00000479398 C3P01024 1663 aa31.99■■■□□ 2.71
PKP4-209ENST00000479398 ZMYM3Q14202 1370 aa31.98■■■□□ 2.71
PKP4-209ENST00000479398 DAPK1P53355 1430 aa31.98■■■□□ 2.71
PKP4-209ENST00000479398 LMTK3Q96Q04 1460 aa31.97■■■□□ 2.71
PKP4-209ENST00000479398 FAM50AQ14320 339 aaKnown RBP31.97■■■□□ 2.71
PKP4-209ENST00000479398 DNMT1P26358 1616 aaKnown RBP31.95■■■□□ 2.71
PKP4-209ENST00000479398 SHANK2Q9UPX8 1470 aa31.94■■■□□ 2.7
PKP4-209ENST00000479398 MROH2AA6NES4 1674 aa31.93■■■□□ 2.7
PKP4-209ENST00000479398 CROCC2H7BZ55 1655 aa31.92■■■□□ 2.7
PKP4-209ENST00000479398 CLTCQ00610 1675 aaKnown RBP31.92■■■□□ 2.7
PKP4-209ENST00000479398 RRP7BPQ9NSQ0 103 aa31.92■■■□□ 2.7
PKP4-209ENST00000479398 CHIC2Q9UKJ5 165 aa31.91■■■□□ 2.7
PKP4-209ENST00000479398 HSPA2P54652 639 aa31.89■■■□□ 2.7
PKP4-209ENST00000479398 DUOX2Q9NRD8 1548 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms