RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
CLOCK-204ENST00000479384 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
CLOCK-204ENST00000479384 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
CLOCK-204ENST00000479384 SPNS2Q8IVW8 549 aa11.07□□□□□ -0.64
CLOCK-204ENST00000479384 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
CLOCK-204ENST00000479384 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
CLOCK-204ENST00000479384 KRTAP3-2Q9BYR7 98 aa11.06□□□□□ -0.64
CLOCK-204ENST00000479384 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
CLOCK-204ENST00000479384 ZSWIM6Q9HCJ5 1215 aa11.02□□□□□ -0.65
CLOCK-204ENST00000479384 ERBB3P21860 1342 aa11.01□□□□□ -0.65
CLOCK-204ENST00000479384 GPR153Q6NV75 609 aa10.99□□□□□ -0.65
CLOCK-204ENST00000479384 KIF3CO14782 793 aa10.97□□□□□ -0.65
CLOCK-204ENST00000479384 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
CLOCK-204ENST00000479384 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
CLOCK-204ENST00000479384 PPP1R37O75864 691 aa10.93□□□□□ -0.66
CLOCK-204ENST00000479384 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
CLOCK-204ENST00000479384 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
CLOCK-204ENST00000479384 KHSRPQ92945 711 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLOCK-204ENST00000479384 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
CLOCK-204ENST00000479384 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
CLOCK-204ENST00000479384 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
CLOCK-204ENST00000479384 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
CLOCK-204ENST00000479384 SLC34A2O95436 690 aa10.82□□□□□ -0.68
CLOCK-204ENST00000479384 NUDT7P0C024 238 aa10.82□□□□□ -0.68
CLOCK-204ENST00000479384 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
CLOCK-204ENST00000479384 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
CLOCK-204ENST00000479384 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
CLOCK-204ENST00000479384 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
CLOCK-204ENST00000479384 FOXK1P85037 733 aa10.74□□□□□ -0.69
CLOCK-204ENST00000479384 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
CLOCK-204ENST00000479384 GPHNQ9NQX3 736 aaPredicted RBP10.73□□□□□ -0.69
CLOCK-204ENST00000479384 PLPP6Q8IY26 295 aa10.72□□□□□ -0.69
CLOCK-204ENST00000479384 MYT1LQ9UL68 1186 aa10.71□□□□□ -0.69
CLOCK-204ENST00000479384 DSG2Q14126 1118 aa10.7□□□□□ -0.7
CLOCK-204ENST00000479384 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
CLOCK-204ENST00000479384 PTCD2Q8WV60 388 aaKnown RBP10.7□□□□□ -0.7
CLOCK-204ENST00000479384 LSM11P83369 360 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLOCK-204ENST00000479384 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
CLOCK-204ENST00000479384 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
CLOCK-204ENST00000479384 PBX2P40425 430 aa10.68□□□□□ -0.7
CLOCK-204ENST00000479384 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
CLOCK-204ENST00000479384 PTGER2P43116 358 aa10.67□□□□□ -0.7
CLOCK-204ENST00000479384 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
CLOCK-204ENST00000479384 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
CLOCK-204ENST00000479384 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
CLOCK-204ENST00000479384 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
CLOCK-204ENST00000479384 TBC1D12O60347 775 aa10.6□□□□□ -0.71
CLOCK-204ENST00000479384 NCKAP5LQ9HCH0 1330 aa10.58□□□□□ -0.71
CLOCK-204ENST00000479384 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
CLOCK-204ENST00000479384 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
CLOCK-204ENST00000479384 OXER1Q8TDS5 423 aa10.58□□□□□ -0.72
CLOCK-204ENST00000479384 DCAF8L2P0C7V8 631 aa10.57□□□□□ -0.72
CLOCK-204ENST00000479384 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLOCK-204ENST00000479384 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
CLOCK-204ENST00000479384 PDE4AP27815 886 aa10.54□□□□□ -0.72
CLOCK-204ENST00000479384 PSEN2P49810 448 aa10.54□□□□□ -0.72
CLOCK-204ENST00000479384 ADGRD1Q6QNK2 874 aa10.54□□□□□ -0.72
CLOCK-204ENST00000479384 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CLOCK-204ENST00000479384 TK2O00142 265 aa10.49□□□□□ -0.73
CLOCK-204ENST00000479384 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
CLOCK-204ENST00000479384 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
CLOCK-204ENST00000479384 HRO43593 1189 aa10.47□□□□□ -0.73
CLOCK-204ENST00000479384 MFSD10Q14728 455 aa10.46□□□□□ -0.73
CLOCK-204ENST00000479384 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
CLOCK-204ENST00000479384 KCNK17Q96T54 332 aa10.46□□□□□ -0.73
CLOCK-204ENST00000479384 EVI5O60447 810 aa10.43□□□□□ -0.74
CLOCK-204ENST00000479384 FOSBP53539 338 aa10.43□□□□□ -0.74
CLOCK-204ENST00000479384 CADPS2Q86UW7 1296 aa10.43□□□□□ -0.74
CLOCK-204ENST00000479384 KCNH8Q96L42 1107 aa10.43□□□□□ -0.74
CLOCK-204ENST00000479384 ANO8Q9HCE9 1232 aaPredicted RBP10.43□□□□□ -0.74
CLOCK-204ENST00000479384 BCL2L12Q9HB09 334 aa10.42□□□□□ -0.74
CLOCK-204ENST00000479384 EMILIN3Q9NT22 766 aa10.41□□□□□ -0.74
CLOCK-204ENST00000479384 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
CLOCK-204ENST00000479384 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
CLOCK-204ENST00000479384 VPS9D1Q9Y2B5 631 aa10.39□□□□□ -0.75
CLOCK-204ENST00000479384 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
CLOCK-204ENST00000479384 PTPREP23469 700 aa10.36□□□□□ -0.75
CLOCK-204ENST00000479384 KCTD12Q96CX2 325 aaKnown RBP10.36□□□□□ -0.75
CLOCK-204ENST00000479384 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
CLOCK-204ENST00000479384 ADAM33Q9BZ11 813 aa10.36□□□□□ -0.75
CLOCK-204ENST00000479384 ZDHHC16Q969W1 377 aa10.35□□□□□ -0.75
CLOCK-204ENST00000479384 STAC3Q96MF2 364 aa10.35□□□□□ -0.75
CLOCK-204ENST00000479384 ZBED2Q9BTP6 218 aa10.33□□□□□ -0.76
CLOCK-204ENST00000479384 BBXQ8WY36 941 aaPredicted RBP10.32□□□□□ -0.76
CLOCK-204ENST00000479384 PLA2G2EQ9NZK7 142 aa10.32□□□□□ -0.76
CLOCK-204ENST00000479384 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
CLOCK-204ENST00000479384 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
CLOCK-204ENST00000479384 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
CLOCK-204ENST00000479384 PHF14O94880 888 aa10.26□□□□□ -0.77
CLOCK-204ENST00000479384 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
CLOCK-204ENST00000479384 DPYSL4O14531 572 aa10.25□□□□□ -0.77
CLOCK-204ENST00000479384 PTPN5P54829 565 aa10.24□□□□□ -0.77
CLOCK-204ENST00000479384 TYW1BQ6NUM6 668 aa10.24□□□□□ -0.77
CLOCK-204ENST00000479384 COL9A1P20849 921 aa10.23□□□□□ -0.77
CLOCK-204ENST00000479384 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
CLOCK-204ENST00000479384 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
CLOCK-204ENST00000479384 PROX2Q3B8N5 592 aa10.22□□□□□ -0.77
CLOCK-204ENST00000479384 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
CLOCK-204ENST00000479384 THSD4Q6ZMP0 1018 aa10.22□□□□□ -0.77
CLOCK-204ENST00000479384 NBPF3Q9H094 633 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms