RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PREX2Q70Z35 1606 aa39.11■■■■□ 3.85
PERM1-203ENST00000479361 AKNAQ7Z591 1439 aa39.11■■■■□ 3.85
PERM1-203ENST00000479361 COL17A1Q9UMD9 1497 aaPredicted RBP39.1■■■■□ 3.85
PERM1-203ENST00000479361 GPATCH8Q9UKJ3 1502 aaKnown RBP39.09■■■■□ 3.85
PERM1-203ENST00000479361 NCOA2Q15596 1464 aa39.08■■■■□ 3.85
PERM1-203ENST00000479361 CDC42BPAQ5VT25 1732 aa39.07■■■■□ 3.85
PERM1-203ENST00000479361 CDC42BPBQ9Y5S2 1711 aa39.05■■■■□ 3.84
PERM1-203ENST00000479361 ADGRL1O94910 1474 aa39■■■■□ 3.83
PERM1-203ENST00000479361 CFDP1Q9UEE9 299 aaPredicted RBP39■■■■□ 3.83
PERM1-203ENST00000479361 ITSN2Q9NZM3 1697 aa38.97■■■■□ 3.83
PERM1-203ENST00000479361 DENND4BO75064 1496 aaPredicted RBP38.97■■■■□ 3.83
PERM1-203ENST00000479361 SCAPERQ9BY12 1400 aa38.95■■■■□ 3.83
PERM1-203ENST00000479361 RAPGEF3O95398 923 aa38.92■■■■□ 3.82
PERM1-203ENST00000479361 ZNF777Q9ULD5 760 aaPredicted RBP38.92■■■■□ 3.82
PERM1-203ENST00000479361 ABCC1P33527 1531 aa38.85■■■■□ 3.81
PERM1-203ENST00000479361 POGZQ7Z3K3 1410 aa38.85■■■■□ 3.81
PERM1-203ENST00000479361 PLEKHH2Q8IVE3 1493 aa38.85■■■■□ 3.81
PERM1-203ENST00000479361 SAMD9LQ8IVG5 1584 aa38.84■■■■□ 3.81
PERM1-203ENST00000479361 FRMPD1Q5SYB0 1578 aa38.83■■■■□ 3.81
PERM1-203ENST00000479361 RICTORQ6R327 1708 aa38.83■■■■□ 3.81
PERM1-203ENST00000479361 MYOM3Q5VTT5 1437 aa38.82■■■■□ 3.81
PERM1-203ENST00000479361 KIAA1107Q9UPP5 1409 aa38.8■■■■□ 3.8
PERM1-203ENST00000479361 ZNF518AQ6AHZ1 1483 aa38.79■■■■□ 3.8
PERM1-203ENST00000479361 MIA2Q96PC5 1412 aa38.77■■■■□ 3.8
PERM1-203ENST00000479361 ARHGEF12Q9NZN5 1544 aa38.75■■■■□ 3.79
PERM1-203ENST00000479361 ZMYM4Q5VZL5 1548 aa38.74■■■■□ 3.79
PERM1-203ENST00000479361 SYCP2Q9BX26 1530 aa38.74■■■■□ 3.79
PERM1-203ENST00000479361 ZNF644Q9H582 1327 aaPredicted RBP38.74■■■■□ 3.79
PERM1-203ENST00000479361 AFAP1Q8N556 730 aa38.72■■■■□ 3.79
PERM1-203ENST00000479361 HNRNPMP52272 730 aaKnown RBP eCLIP38.71■■■■□ 3.79
PERM1-203ENST00000479361 TRAPPC8Q9Y2L5 1435 aa38.71■■■■□ 3.79
PERM1-203ENST00000479361 CAMSAP2Q08AD1 1489 aa38.7■■■■□ 3.79
PERM1-203ENST00000479361 MAGI2Q86UL8 1455 aa38.7■■■■□ 3.79
PERM1-203ENST00000479361 KDM5CP41229 1560 aa38.68■■■■□ 3.78
PERM1-203ENST00000479361 PPARGC1BQ86YN6 1023 aaKnown RBP38.64■■■■□ 3.78
PERM1-203ENST00000479361 FGD6Q6ZV73 1430 aa38.63■■■■□ 3.77
PERM1-203ENST00000479361 MBD5Q9P267 1494 aa38.61■■■■□ 3.77
PERM1-203ENST00000479361 RSPH4AQ5TD94 716 aa38.61■■■■□ 3.77
PERM1-203ENST00000479361 ZFYVE16Q7Z3T8 1539 aa38.61■■■■□ 3.77
PERM1-203ENST00000479361 MYT1LQ9UL68 1186 aa38.6■■■■□ 3.77
PERM1-203ENST00000479361 MLH3Q9UHC1 1453 aa38.59■■■■□ 3.77
PERM1-203ENST00000479361 ARHGEF40Q8TER5 1519 aa38.58■■■■□ 3.77
PERM1-203ENST00000479361 HECW2Q9P2P5 1572 aa38.58■■■■□ 3.77
PERM1-203ENST00000479361 SPAG9O60271 1321 aaKnown RBP38.56■■■■□ 3.76
PERM1-203ENST00000479361 PTPN23Q9H3S7 1636 aa38.55■■■■□ 3.76
PERM1-203ENST00000479361 YEATS2Q9ULM3 1422 aa38.55■■■■□ 3.76
PERM1-203ENST00000479361 CCDC141Q6ZP82 1450 aa38.54■■■■□ 3.76
PERM1-203ENST00000479361 ARHGEF5Q12774 1597 aa38.53■■■■□ 3.76
PERM1-203ENST00000479361 TCOF1Q13428 1488 aaKnown RBP38.51■■■■□ 3.76
PERM1-203ENST00000479361 ATP10AO60312 1499 aa38.46■■■■□ 3.75
PERM1-203ENST00000479361 TSPY4P0CV99 314 aa38.44■■■■□ 3.74
PERM1-203ENST00000479361 TSPY10P0CW01 314 aa38.44■■■■□ 3.74
PERM1-203ENST00000479361 ATP7AQ04656 1500 aa38.43■■■■□ 3.74
PERM1-203ENST00000479361 KIDINS220Q9ULH0 1771 aa38.43■■■■□ 3.74
PERM1-203ENST00000479361 INO80Q9ULG1 1556 aaPredicted RBP38.43■■■■□ 3.74
PERM1-203ENST00000479361 RTEL1-TNFRSF6BF6WH68 1400 aa38.42■■■■□ 3.74
PERM1-203ENST00000479361 C9orf84Q5VXU9 1444 aa38.41■■■■□ 3.74
PERM1-203ENST00000479361 DIP2CQ9Y2E4 1556 aa38.4■■■■□ 3.74
PERM1-203ENST00000479361 FAM50AQ14320 339 aaKnown RBP38.4■■■■□ 3.74
PERM1-203ENST00000479361 ABCA6Q8N139 1617 aa38.39■■■■□ 3.74
PERM1-203ENST00000479361 ARID4BQ4LE39 1312 aaPredicted RBP38.37■■■■□ 3.73
PERM1-203ENST00000479361 REREQ9P2R6 1566 aa38.32■■■■□ 3.73
PERM1-203ENST00000479361 ABCC5O15440 1437 aa38.32■■■■□ 3.73
PERM1-203ENST00000479361 DNMT1P26358 1616 aaKnown RBP38.31■■■■□ 3.72
PERM1-203ENST00000479361 DAPK1P53355 1430 aa38.31■■■■□ 3.72
PERM1-203ENST00000479361 MAST1Q9Y2H9 1570 aa38.3■■■■□ 3.72
PERM1-203ENST00000479361 SHANK2Q9UPX8 1470 aa38.28■■■■□ 3.72
PERM1-203ENST00000479361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.27■■■■□ 3.72
PERM1-203ENST00000479361 CROCC2H7BZ55 1655 aa38.25■■■■□ 3.71
PERM1-203ENST00000479361 A2MP01023 1474 aa38.24■■■■□ 3.71
PERM1-203ENST00000479361 RRBP1Q9P2E9 1410 aaKnown RBP38.24■■■■□ 3.71
PERM1-203ENST00000479361 ADGBQ8N7X0 1667 aa38.23■■■■□ 3.71
PERM1-203ENST00000479361 SIGLEC1Q9BZZ2 1709 aa38.21■■■■□ 3.71
PERM1-203ENST00000479361 AGLP35573 1532 aa38.2■■■■□ 3.71
PERM1-203ENST00000479361 KDM4FA0A1W2PPD8 638 aa38.19■■■■□ 3.7
PERM1-203ENST00000479361 BCORL1Q5H9F3 1711 aa38.16■■■■□ 3.7
PERM1-203ENST00000479361 PLXNC1O60486 1568 aa38.16■■■■□ 3.7
PERM1-203ENST00000479361 DHX29Q7Z478 1369 aaKnown RBP38.16■■■■□ 3.7
PERM1-203ENST00000479361 ANKRD30AQ9BXX3 1397 aa38.12■■■■□ 3.69
PERM1-203ENST00000479361 CHIC2Q9UKJ5 165 aa38.12■■■■□ 3.69
PERM1-203ENST00000479361 MLECQ14165 292 aa38.11■■■■□ 3.69
PERM1-203ENST00000479361 ADAMTSL3P82987 1691 aa38.07■■■■□ 3.69
PERM1-203ENST00000479361 KIF15Q9NS87 1388 aa38.07■■■■□ 3.69
PERM1-203ENST00000479361 RRP7BPQ9NSQ0 103 aa38.06■■■■□ 3.68
PERM1-203ENST00000479361 ADGRL2O95490 1459 aa38.06■■■■□ 3.68
PERM1-203ENST00000479361 ITGAEP38570 1179 aa38.05■■■■□ 3.68
PERM1-203ENST00000479361 DUOX2Q9NRD8 1548 aa38.05■■■■□ 3.68
PERM1-203ENST00000479361 NCOA1Q15788 1441 aa38.04■■■■□ 3.68
PERM1-203ENST00000479361 PTPRKQ15262 1439 aa38.03■■■■□ 3.68
PERM1-203ENST00000479361 MADDQ8WXG6 1647 aa37.98■■■■□ 3.67
PERM1-203ENST00000479361 ROCK1Q13464 1354 aa37.98■■■■□ 3.67
PERM1-203ENST00000479361 KIF3BO15066 747 aa37.98■■■■□ 3.67
PERM1-203ENST00000479361 ERBINQ96RT1 1412 aa37.95■■■■□ 3.67
PERM1-203ENST00000479361 GGT6Q6P531 493 aa37.94■■■■□ 3.66
PERM1-203ENST00000479361 AEBP2Q6ZN18 517 aaPredicted RBP37.94■■■■□ 3.66
PERM1-203ENST00000479361 ESF1Q9H501 851 aaKnown RBP37.94■■■■□ 3.66
PERM1-203ENST00000479361 EIF2AK4Q9P2K8 1649 aaKnown RBP37.93■■■■□ 3.66
PERM1-203ENST00000479361 FER1L4A9Z1Z3 1794 aa37.92■■■■□ 3.66
PERM1-203ENST00000479361 PPP6R1Q9UPN7 881 aa37.91■■■■□ 3.66
PERM1-203ENST00000479361 RIMS1Q86UR5 1692 aaKnown RBP37.88■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms