RNA–Protein interactions for RNA: ENST00000479325.1

RUNX1-215, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-215ENST00000479325 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
RUNX1-215ENST00000479325 PBX2P40425 430 aa10.96□□□□□ -0.65
RUNX1-215ENST00000479325 RGS20O76081 388 aa10.95□□□□□ -0.66
RUNX1-215ENST00000479325 ABCC9O60706 1549 aa10.94□□□□□ -0.66
RUNX1-215ENST00000479325 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
RUNX1-215ENST00000479325 TMEM92Q6UXU6 159 aa10.88□□□□□ -0.67
RUNX1-215ENST00000479325 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
RUNX1-215ENST00000479325 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
RUNX1-215ENST00000479325 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
RUNX1-215ENST00000479325 AXIN2Q9Y2T1 843 aa10.83□□□□□ -0.68
RUNX1-215ENST00000479325 SCRIBQ14160 1630 aa10.81□□□□□ -0.68
RUNX1-215ENST00000479325 ADGRD1Q6QNK2 874 aa10.8□□□□□ -0.68
RUNX1-215ENST00000479325 NACADO15069 1562 aa10.77□□□□□ -0.68
RUNX1-215ENST00000479325 HRCP23327 699 aa10.76□□□□□ -0.69
RUNX1-215ENST00000479325 POTEEQ6S8J3 1075 aa10.76□□□□□ -0.69
RUNX1-215ENST00000479325 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
RUNX1-215ENST00000479325 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
RUNX1-215ENST00000479325 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
RUNX1-215ENST00000479325 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
RUNX1-215ENST00000479325 NUDT7P0C024 238 aa10.72□□□□□ -0.69
RUNX1-215ENST00000479325 IFFO2Q5TF58 517 aa10.72□□□□□ -0.69
RUNX1-215ENST00000479325 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
RUNX1-215ENST00000479325 Q6ZNB5 142 aa10.71□□□□□ -0.69
RUNX1-215ENST00000479325 RB1CC1Q8TDY2 1594 aa10.71□□□□□ -0.69
RUNX1-215ENST00000479325 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
RUNX1-215ENST00000479325 TK2O00142 265 aa10.7□□□□□ -0.7
RUNX1-215ENST00000479325 FKBP8Q14318 412 aa10.68□□□□□ -0.7
RUNX1-215ENST00000479325 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
RUNX1-215ENST00000479325 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
RUNX1-215ENST00000479325 A0A0G2JS52 829 aa10.65□□□□□ -0.7
RUNX1-215ENST00000479325 SOX12O15370 315 aa10.65□□□□□ -0.7
RUNX1-215ENST00000479325 HRO43593 1189 aa10.65□□□□□ -0.7
RUNX1-215ENST00000479325 PTPN5P54829 565 aa10.63□□□□□ -0.71
RUNX1-215ENST00000479325 PSDA5PKW4 1024 aaPredicted RBP10.62□□□□□ -0.71
RUNX1-215ENST00000479325 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
RUNX1-215ENST00000479325 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
RUNX1-215ENST00000479325 TRIM26Q12899 539 aaPredicted RBP10.58□□□□□ -0.72
RUNX1-215ENST00000479325 PCDHGA4Q9Y5G9 962 aa10.58□□□□□ -0.72
RUNX1-215ENST00000479325 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
RUNX1-215ENST00000479325 ZEB1P37275 1124 aaPredicted RBP10.55□□□□□ -0.72
RUNX1-215ENST00000479325 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
RUNX1-215ENST00000479325 MS4A4AQ96JQ5 239 aa10.55□□□□□ -0.72
RUNX1-215ENST00000479325 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
RUNX1-215ENST00000479325 SLC34A2O95436 690 aa10.53□□□□□ -0.72
RUNX1-215ENST00000479325 PSEN2P49810 448 aa10.52□□□□□ -0.73
RUNX1-215ENST00000479325 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
RUNX1-215ENST00000479325 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
RUNX1-215ENST00000479325 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
RUNX1-215ENST00000479325 LAPTM4AQ15012 233 aa10.47□□□□□ -0.73
RUNX1-215ENST00000479325 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
RUNX1-215ENST00000479325 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
RUNX1-215ENST00000479325 MROH2BQ7Z745 1585 aa10.46□□□□□ -0.74
RUNX1-215ENST00000479325 WIZO95785 1651 aa10.46□□□□□ -0.74
RUNX1-215ENST00000479325 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
RUNX1-215ENST00000479325 KIF3CO14782 793 aa10.44□□□□□ -0.74
RUNX1-215ENST00000479325 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
RUNX1-215ENST00000479325 GOLGA8CPA6NN73 597 aa10.42□□□□□ -0.74
RUNX1-215ENST00000479325 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
RUNX1-215ENST00000479325 THSD4Q6ZMP0 1018 aa10.42□□□□□ -0.74
RUNX1-215ENST00000479325 NLRP6P59044 892 aa10.41□□□□□ -0.74
RUNX1-215ENST00000479325 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
RUNX1-215ENST00000479325 SMARCA4P51532 1647 aa10.38□□□□□ -0.75
RUNX1-215ENST00000479325 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
RUNX1-215ENST00000479325 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
RUNX1-215ENST00000479325 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
RUNX1-215ENST00000479325 KCNK17Q96T54 332 aa10.36□□□□□ -0.75
RUNX1-215ENST00000479325 UNC13AQ9UPW8 1703 aa10.36□□□□□ -0.75
RUNX1-215ENST00000479325 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
RUNX1-215ENST00000479325 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
RUNX1-215ENST00000479325 WNT2BQ93097 391 aa10.35□□□□□ -0.75
RUNX1-215ENST00000479325 GFRA3O60609 400 aa10.32□□□□□ -0.76
RUNX1-215ENST00000479325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.31□□□□□ -0.76
RUNX1-215ENST00000479325 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
RUNX1-215ENST00000479325 PPARGC1BQ86YN6 1023 aaKnown RBP10.31□□□□□ -0.76
RUNX1-215ENST00000479325 ZFP91Q96JP5 570 aaPredicted RBP10.31□□□□□ -0.76
RUNX1-215ENST00000479325 EEA1Q15075 1411 aa10.31□□□□□ -0.76
RUNX1-215ENST00000479325 LCE2BO14633 110 aa10.29□□□□□ -0.76
RUNX1-215ENST00000479325 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
RUNX1-215ENST00000479325 SMARCA2P51531 1590 aa10.29□□□□□ -0.76
RUNX1-215ENST00000479325 RIOK3O14730 519 aaKnown RBP10.28□□□□□ -0.76
RUNX1-215ENST00000479325 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
RUNX1-215ENST00000479325 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
RUNX1-215ENST00000479325 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
RUNX1-215ENST00000479325 VGFO15240 615 aaPredicted RBP10.27□□□□□ -0.77
RUNX1-215ENST00000479325 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
RUNX1-215ENST00000479325 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
RUNX1-215ENST00000479325 BHMG1C9JSJ3 638 aaPredicted RBP10.25□□□□□ -0.77
RUNX1-215ENST00000479325 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
RUNX1-215ENST00000479325 TBC1D12O60347 775 aa10.24□□□□□ -0.77
RUNX1-215ENST00000479325 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
RUNX1-215ENST00000479325 ZNF775Q96BV0 537 aaPredicted RBP10.21□□□□□ -0.77
RUNX1-215ENST00000479325 ABCC8Q09428 1581 aa10.2□□□□□ -0.78
RUNX1-215ENST00000479325 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.78
RUNX1-215ENST00000479325 PEG3Q9GZU2 1588 aa10.19□□□□□ -0.78
RUNX1-215ENST00000479325 KCNC4Q03721 635 aa10.18□□□□□ -0.78
RUNX1-215ENST00000479325 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
RUNX1-215ENST00000479325 GOLGA3Q08378 1498 aa10.17□□□□□ -0.78
RUNX1-215ENST00000479325 NRG2O14511 850 aaPredicted RBP10.17□□□□□ -0.78
RUNX1-215ENST00000479325 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
RUNX1-215ENST00000479325 TNIKQ9UKE5 1360 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms